RNA–Protein interactions for RNA: ENST00000505330.5

ATP2C1-210, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 4,888 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-210ENST00000505330 A0A087X002 238 aa3.2□□□□□ -1.9
ATP2C1-210ENST00000505330 Q1T7F1 81 aa3.2□□□□□ -1.9
ATP2C1-210ENST00000505330 OXTP01178 125 aa3.2□□□□□ -1.9
ATP2C1-210ENST00000505330 Q5XG85 94 aa3.2□□□□□ -1.9
ATP2C1-210ENST00000505330 ZCCHC13Q8WW36 166 aaKnown RBP3.2□□□□□ -1.9
ATP2C1-210ENST00000505330 Q6ZSA8 131 aa3.2□□□□□ -1.9
ATP2C1-210ENST00000505330 LCE6AA0A183 80 aa3.19□□□□□ -1.9
ATP2C1-210ENST00000505330 SPINT4Q6UDR6 99 aa3.19□□□□□ -1.9
ATP2C1-210ENST00000505330 Q6ZRN7 208 aaPredicted RBP3.19□□□□□ -1.9
ATP2C1-210ENST00000505330 CDC42SE1Q9NRR8 79 aa3.19□□□□□ -1.9
ATP2C1-210ENST00000505330 OTOGQ6ZRI0 2925 aa3.19□□□□□ -1.9
ATP2C1-210ENST00000505330 NOTCH2NLQ7Z3S9 236 aa3.18□□□□□ -1.9
ATP2C1-210ENST00000505330 LINC00483Q53H64 154 aa3.18□□□□□ -1.9
ATP2C1-210ENST00000505330 SVEP1Q4LDE5 3571 aa3.18□□□□□ -1.9
ATP2C1-210ENST00000505330 TENM2Q9NT68 2774 aa3.18□□□□□ -1.9
ATP2C1-210ENST00000505330 SPINK7P58062 85 aa3.18□□□□□ -1.9
ATP2C1-210ENST00000505330 Q5VSD8 79 aa3.18□□□□□ -1.9
ATP2C1-210ENST00000505330 TGP01266 2768 aa3.17□□□□□ -1.9
ATP2C1-210ENST00000505330 KRTAP29-1A8MX34 341 aaPredicted RBP3.16□□□□□ -1.9
ATP2C1-210ENST00000505330 ZFHX3Q15911 3703 aa3.16□□□□□ -1.9
ATP2C1-210ENST00000505330 KTN1-AS1Q86SY8 53 aa3.16□□□□□ -1.9
ATP2C1-210ENST00000505330 A0A1B0GU33 70 aa3.15□□□□□ -1.9
ATP2C1-210ENST00000505330 CRIPTQ9P021 101 aa3.15□□□□□ -1.9
ATP2C1-210ENST00000505330 Q75L30 129 aa3.15□□□□□ -1.91
ATP2C1-210ENST00000505330 LINC01558Q9Y6Z2 57 aa3.15□□□□□ -1.91
ATP2C1-210ENST00000505330 Q5VV11 94 aa3.14□□□□□ -1.91
ATP2C1-210ENST00000505330 SRRM2Q9UQ35 2752 aaKnown RBP3.14□□□□□ -1.91
ATP2C1-210ENST00000505330 CSMD2Q7Z408 3487 aa3.13□□□□□ -1.91
ATP2C1-210ENST00000505330 NBPF19A0A087WUL8 3843 aa3.13□□□□□ -1.91
ATP2C1-210ENST00000505330 LCA10Q71F78 164 aa3.11□□□□□ -1.91
ATP2C1-210ENST00000505330 KRTAP13-1Q8IUC0 172 aa3.11□□□□□ -1.91
ATP2C1-210ENST00000505330 KRTAP13-2Q52LG2 175 aa3.1□□□□□ -1.91
ATP2C1-210ENST00000505330 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
ATP2C1-210ENST00000505330 DMAC1Q96GE9 116 aa3.1□□□□□ -1.91
ATP2C1-210ENST00000505330 CSAG1Q6PB30 78 aa3.1□□□□□ -1.91
ATP2C1-210ENST00000505330 S4R3F8 94 aa3.1□□□□□ -1.91
ATP2C1-210ENST00000505330 M0R2T5 61 aa3.09□□□□□ -1.91
ATP2C1-210ENST00000505330 CAMK2N1Q7Z7J9 78 aa3.08□□□□□ -1.92
ATP2C1-210ENST00000505330 KRTAP17-1Q9BYP8 105 aa3.07□□□□□ -1.92
ATP2C1-210ENST00000505330 SPENQ96T58 3664 aaKnown RBP3.07□□□□□ -1.92
ATP2C1-210ENST00000505330 SEC61BP60468 96 aaKnown RBP3.05□□□□□ -1.92
ATP2C1-210ENST00000505330 R4GN34 69 aa3.05□□□□□ -1.92
ATP2C1-210ENST00000505330 ASB16-AS1Q495Z4 193 aa3.04□□□□□ -1.92
ATP2C1-210ENST00000505330 SPATA8Q6RVD6 105 aa3.04□□□□□ -1.92
ATP2C1-210ENST00000505330 H1FX-AS1Q4G0G2 97 aa3.01□□□□□ -1.93
ATP2C1-210ENST00000505330 A8MU10 97 aa3.01□□□□□ -1.93
ATP2C1-210ENST00000505330 M0QZ58 72 aa3.01□□□□□ -1.93
ATP2C1-210ENST00000505330 RPL37P61927 97 aaKnown RBP3□□□□□ -1.93
ATP2C1-210ENST00000505330 ADM2Q7Z4H4 148 aa3□□□□□ -1.93
ATP2C1-210ENST00000505330 FBN3Q75N90 2809 aa2.99□□□□□ -1.93
ATP2C1-210ENST00000505330 RPS29P62273 56 aaKnown RBP2.99□□□□□ -1.93
ATP2C1-210ENST00000505330 KRTAP1-4P0C5Y4 121 aa2.98□□□□□ -1.93
ATP2C1-210ENST00000505330 TRRAPQ9Y4A5 3859 aa2.97□□□□□ -1.93
ATP2C1-210ENST00000505330 KRTAP21-3Q3LHN1 58 aa2.97□□□□□ -1.93
ATP2C1-210ENST00000505330 COL7A1Q02388 2944 aa2.95□□□□□ -1.94
ATP2C1-210ENST00000505330 ROMO1P60602 79 aa2.95□□□□□ -1.94
ATP2C1-210ENST00000505330 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
ATP2C1-210ENST00000505330 BSNQ9UPA5 3926 aa2.93□□□□□ -1.94
ATP2C1-210ENST00000505330 A8MUU9 505 aa2.93□□□□□ -1.94
ATP2C1-210ENST00000505330 C20orf166-AS1Q96NR2 134 aa2.92□□□□□ -1.94
ATP2C1-210ENST00000505330 MEGF8Q7Z7M0 2845 aa2.91□□□□□ -1.94
ATP2C1-210ENST00000505330 A6NN06 94 aa2.91□□□□□ -1.94
ATP2C1-210ENST00000505330 ANK3Q12955 4377 aaKnown RBP2.88□□□□□ -1.95
ATP2C1-210ENST00000505330 XP32Q5T750 250 aa2.88□□□□□ -1.95
ATP2C1-210ENST00000505330 KRTAP16-1A8MUX0 517 aa2.87□□□□□ -1.95
ATP2C1-210ENST00000505330 PLAC4Q8WY50 150 aa2.86□□□□□ -1.95
ATP2C1-210ENST00000505330 VPS13CQ709C8 3753 aa2.85□□□□□ -1.95
ATP2C1-210ENST00000505330 H3BS24 57 aa2.84□□□□□ -1.96
ATP2C1-210ENST00000505330 KRTAP25-1Q3LHN0 102 aa2.84□□□□□ -1.96
ATP2C1-210ENST00000505330 A0A1B0GVY2 172 aa2.81□□□□□ -1.96
ATP2C1-210ENST00000505330 H0YAA0 97 aa2.8□□□□□ -1.96
ATP2C1-210ENST00000505330 KRTAP13-3Q3SY46 172 aa2.8□□□□□ -1.96
ATP2C1-210ENST00000505330 TPRXLQ17RH7 258 aa2.79□□□□□ -1.96
ATP2C1-210ENST00000505330 P0C880 135 aa2.78□□□□□ -1.96
ATP2C1-210ENST00000505330 C10orf95Q9H7T3 257 aa2.78□□□□□ -1.96
ATP2C1-210ENST00000505330 KRTAP10-8P60410 259 aa2.78□□□□□ -1.96
ATP2C1-210ENST00000505330 ZNF469Q96JG9 3925 aaPredicted RBP2.78□□□□□ -1.96
ATP2C1-210ENST00000505330 CSMD3Q7Z407 3707 aa2.76□□□□□ -1.97
ATP2C1-210ENST00000505330 A0A0A0MQY5 61 aa2.74□□□□□ -1.97
ATP2C1-210ENST00000505330 TNP1P09430 55 aa2.73□□□□□ -1.97
ATP2C1-210ENST00000505330 NDUFAF8A1L188 74 aa2.73□□□□□ -1.97
ATP2C1-210ENST00000505330 KRTAP10-10P60014 251 aa2.69□□□□□ -1.98
ATP2C1-210ENST00000505330 KRTAP3-1Q9BYR8 98 aa2.69□□□□□ -1.98
ATP2C1-210ENST00000505330 HUWE1Q7Z6Z7 4374 aaKnown RBP2.67□□□□□ -1.98
ATP2C1-210ENST00000505330 KRTAP12-2P59991 146 aa2.64□□□□□ -1.99
ATP2C1-210ENST00000505330 AKAP9Q99996 3911 aa2.62□□□□□ -1.99
ATP2C1-210ENST00000505330 DNHD1Q96M86 4753 aa2.62□□□□□ -1.99
ATP2C1-210ENST00000505330 PP632Q6XCG6 107 aa2.62□□□□□ -1.99
ATP2C1-210ENST00000505330 MT1HL1P0DM35 61 aa2.61□□□□□ -1.99
ATP2C1-210ENST00000505330 KRTAP13-4Q3LI77 160 aa2.6□□□□□ -1.99
ATP2C1-210ENST00000505330 KRTAP12-1P59990 96 aa2.59□□□□□ -1.99
ATP2C1-210ENST00000505330 KRTAP4-5Q9BYR2 181 aa2.59□□□□□ -1.99
ATP2C1-210ENST00000505330 KRTAP10-4P60372 401 aaPredicted RBP2.59□□□□□ -2
ATP2C1-210ENST00000505330 KRTAP10-6P60371 365 aaPredicted RBP2.58□□□□□ -2
ATP2C1-210ENST00000505330 LCE2DQ5TA82 110 aaPredicted RBP2.58□□□□□ -2
ATP2C1-210ENST00000505330 DNAH9Q9NYC9 4486 aa2.57□□□□□ -2
ATP2C1-210ENST00000505330 DNAH5Q8TE73 4624 aa2.55□□□□□ -2
ATP2C1-210ENST00000505330 PLECQ15149 4684 aaKnown RBP2.55□□□□□ -2
ATP2C1-210ENST00000505330 DNAH11Q96DT5 4516 aa2.55□□□□□ -2
ATP2C1-210ENST00000505330 PRO2289Q9P1D8 64 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms