RNA–Protein interactions for RNA: ENST00000504376.6

CDH12-202, Transcript of cadherin 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDH12, Length 4,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-202ENST00000504376 ANAPC11Q9NYG5 84 aa4.69□□□□□ -1.66
CDH12-202ENST00000504376 A0A087X002 238 aa4.68□□□□□ -1.66
CDH12-202ENST00000504376 C4orf48Q5BLP8 95 aa4.68□□□□□ -1.66
CDH12-202ENST00000504376 IGKV2-30P06310 120 aa4.68□□□□□ -1.66
CDH12-202ENST00000504376 NOTCH2NLQ7Z3S9 236 aa4.67□□□□□ -1.66
CDH12-202ENST00000504376 PKD1L1Q8TDX9 2849 aa4.67□□□□□ -1.66
CDH12-202ENST00000504376 STAB1Q9NY15 2570 aa4.67□□□□□ -1.66
CDH12-202ENST00000504376 KRTAP13-3Q3SY46 172 aa4.67□□□□□ -1.66
CDH12-202ENST00000504376 TRRAPQ9Y4A5 3859 aa4.66□□□□□ -1.66
CDH12-202ENST00000504376 NOTCH1P46531 2555 aa4.66□□□□□ -1.66
CDH12-202ENST00000504376 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.66
CDH12-202ENST00000504376 DNAH1Q9P2D7 4330 aa4.65□□□□□ -1.67
CDH12-202ENST00000504376 NBEAL1Q6ZS30 2694 aa4.64□□□□□ -1.67
CDH12-202ENST00000504376 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
CDH12-202ENST00000504376 IGKV2D-30A0A075B6S6 120 aa4.63□□□□□ -1.67
CDH12-202ENST00000504376 RETNLBQ9BQ08 111 aa4.62□□□□□ -1.67
CDH12-202ENST00000504376 DNAH3Q8TD57 4116 aa4.62□□□□□ -1.67
CDH12-202ENST00000504376 PLA2G1BP04054 148 aaKnown RBP4.61□□□□□ -1.67
CDH12-202ENST00000504376 HUWE1Q7Z6Z7 4374 aaKnown RBP4.59□□□□□ -1.67
CDH12-202ENST00000504376 LY6G6CO95867 125 aa4.59□□□□□ -1.67
CDH12-202ENST00000504376 SPINK1P00995 79 aa4.57□□□□□ -1.68
CDH12-202ENST00000504376 STAB2Q8WWQ8 2551 aa4.57□□□□□ -1.68
CDH12-202ENST00000504376 COL6A5A8TX70 2615 aa4.57□□□□□ -1.68
CDH12-202ENST00000504376 TYMSOSQ8TAI1 123 aa4.56□□□□□ -1.68
CDH12-202ENST00000504376 MGAM2Q2M2H8 2515 aa4.56□□□□□ -1.68
CDH12-202ENST00000504376 LINC01554Q52M75 96 aa4.54□□□□□ -1.68
CDH12-202ENST00000504376 CMYA5Q8N3K9 4069 aa4.54□□□□□ -1.68
CDH12-202ENST00000504376 KRTAP16-1A8MUX0 517 aa4.54□□□□□ -1.68
CDH12-202ENST00000504376 ANK2Q01484 3957 aa4.53□□□□□ -1.68
CDH12-202ENST00000504376 KRTAP13-2Q52LG2 175 aa4.53□□□□□ -1.68
CDH12-202ENST00000504376 RPS29P62273 56 aaKnown RBP4.52□□□□□ -1.69
CDH12-202ENST00000504376 K7ERS5 55 aa4.52□□□□□ -1.69
CDH12-202ENST00000504376 TENM2Q9NT68 2774 aa4.52□□□□□ -1.69
CDH12-202ENST00000504376 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
CDH12-202ENST00000504376 LINC00304Q8N9R0 145 aa4.5□□□□□ -1.69
CDH12-202ENST00000504376 Q6ZSA8 131 aa4.49□□□□□ -1.69
CDH12-202ENST00000504376 FBN1P35555 2871 aaKnown RBP4.49□□□□□ -1.69
CDH12-202ENST00000504376 DYNC2H1Q8NCM8 4307 aaKnown RBP4.48□□□□□ -1.69
CDH12-202ENST00000504376 SRRM2Q9UQ35 2752 aaKnown RBP4.48□□□□□ -1.69
CDH12-202ENST00000504376 DNAH10Q8IVF4 4471 aa4.47□□□□□ -1.69
CDH12-202ENST00000504376 KRTAP10-2P60368 255 aa4.47□□□□□ -1.69
CDH12-202ENST00000504376 Q8N1X5 172 aa4.46□□□□□ -1.7
CDH12-202ENST00000504376 KRTAP1-4P0C5Y4 121 aa4.45□□□□□ -1.7
CDH12-202ENST00000504376 KRTAP10-1P60331 282 aa4.45□□□□□ -1.7
CDH12-202ENST00000504376 A0A1B0GU33 70 aa4.43□□□□□ -1.7
CDH12-202ENST00000504376 CSAG1Q6PB30 78 aa4.43□□□□□ -1.7
CDH12-202ENST00000504376 DNAH9Q9NYC9 4486 aa4.43□□□□□ -1.7
CDH12-202ENST00000504376 ALMS1Q8TCU4 4167 aa4.43□□□□□ -1.7
CDH12-202ENST00000504376 ADM2Q7Z4H4 148 aa4.43□□□□□ -1.7
CDH12-202ENST00000504376 H1FX-AS1Q4G0G2 97 aa4.39□□□□□ -1.71
CDH12-202ENST00000504376 VPS13DQ5THJ4 4388 aa4.39□□□□□ -1.71
CDH12-202ENST00000504376 C20orf166-AS1Q96NR2 134 aa4.39□□□□□ -1.71
CDH12-202ENST00000504376 A8MUU9 505 aa4.38□□□□□ -1.71
CDH12-202ENST00000504376 DNAH17Q9UFH2 4485 aa4.38□□□□□ -1.71
CDH12-202ENST00000504376 PLECQ15149 4684 aaKnown RBP4.36□□□□□ -1.71
CDH12-202ENST00000504376 C9orf92A6NGG3 77 aa4.35□□□□□ -1.71
CDH12-202ENST00000504376 DNAH8Q96JB1 4490 aa4.34□□□□□ -1.71
CDH12-202ENST00000504376 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
CDH12-202ENST00000504376 H0YAA0 97 aa4.33□□□□□ -1.72
CDH12-202ENST00000504376 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
CDH12-202ENST00000504376 LYSTQ99698 3801 aa4.33□□□□□ -1.72
CDH12-202ENST00000504376 COL7A1Q02388 2944 aa4.32□□□□□ -1.72
CDH12-202ENST00000504376 HECTD4Q9Y4D8 3996 aa4.31□□□□□ -1.72
CDH12-202ENST00000504376 MEGF8Q7Z7M0 2845 aa4.29□□□□□ -1.72
CDH12-202ENST00000504376 TGP01266 2768 aa4.28□□□□□ -1.72
CDH12-202ENST00000504376 DNAH6Q9C0G6 4158 aa4.27□□□□□ -1.73
CDH12-202ENST00000504376 DNAH7Q8WXX0 4024 aa4.27□□□□□ -1.73
CDH12-202ENST00000504376 ROMO1P60602 79 aa4.26□□□□□ -1.73
CDH12-202ENST00000504376 STARD9Q9P2P6 4700 aa4.26□□□□□ -1.73
CDH12-202ENST00000504376 H3BS24 57 aa4.25□□□□□ -1.73
CDH12-202ENST00000504376 RPL37P61927 97 aaKnown RBP4.25□□□□□ -1.73
CDH12-202ENST00000504376 CSMD3Q7Z407 3707 aa4.25□□□□□ -1.73
CDH12-202ENST00000504376 DNAH2Q9P225 4427 aa4.24□□□□□ -1.73
CDH12-202ENST00000504376 SMR3BP02814 79 aaPredicted RBP4.24□□□□□ -1.73
CDH12-202ENST00000504376 PRKDCP78527 4128 aaKnown RBP4.23□□□□□ -1.73
CDH12-202ENST00000504376 KRTAP3-1Q9BYR8 98 aa4.22□□□□□ -1.73
CDH12-202ENST00000504376 FRAS1Q86XX4 4008 aa4.22□□□□□ -1.73
CDH12-202ENST00000504376 S4R3F8 94 aa4.21□□□□□ -1.74
CDH12-202ENST00000504376 DNAH11Q96DT5 4516 aa4.19□□□□□ -1.74
CDH12-202ENST00000504376 FBN3Q75N90 2809 aa4.18□□□□□ -1.74
CDH12-202ENST00000504376 CRIPTQ9P021 101 aa4.17□□□□□ -1.74
CDH12-202ENST00000504376 SPINT4Q6UDR6 99 aa4.16□□□□□ -1.74
CDH12-202ENST00000504376 DNAH5Q8TE73 4624 aa4.16□□□□□ -1.74
CDH12-202ENST00000504376 KMT2AQ03164 3969 aa4.15□□□□□ -1.74
CDH12-202ENST00000504376 A0A0D9SG42 100 aa4.15□□□□□ -1.75
CDH12-202ENST00000504376 A0A1B0GVY2 172 aa4.11□□□□□ -1.75
CDH12-202ENST00000504376 KRTAP21-3Q3LHN1 58 aa4.1□□□□□ -1.75
CDH12-202ENST00000504376 KRTAP10-4P60372 401 aaPredicted RBP4.09□□□□□ -1.75
CDH12-202ENST00000504376 SACSQ9NZJ4 4579 aa4.09□□□□□ -1.76
CDH12-202ENST00000504376 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
CDH12-202ENST00000504376 LRP1BQ9NZR2 4599 aa4.08□□□□□ -1.76
CDH12-202ENST00000504376 M0QZ58 72 aa4.07□□□□□ -1.76
CDH12-202ENST00000504376 XP32Q5T750 250 aa4.06□□□□□ -1.76
CDH12-202ENST00000504376 VPS13BQ7Z7G8 4022 aa4.05□□□□□ -1.76
CDH12-202ENST00000504376 KRTAP10-8P60410 259 aa4.04□□□□□ -1.76
CDH12-202ENST00000504376 KRTAP3-3Q9BYR6 98 aa4.04□□□□□ -1.76
CDH12-202ENST00000504376 Q5VSD8 79 aa4.03□□□□□ -1.76
CDH12-202ENST00000504376 PKD1P98161 4303 aa4.03□□□□□ -1.76
CDH12-202ENST00000504376 KRTAP3-2Q9BYR7 98 aa4.03□□□□□ -1.77
CDH12-202ENST00000504376 DMBT1Q9UGM3 2413 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms