RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 VPS13CQ709C8 3753 aa7.93□□□□□ -1.14
SPCS3-201ENST00000503362 Q75L30 129 aa7.92□□□□□ -1.14
SPCS3-201ENST00000503362 KTN1-AS1Q86SY8 53 aa7.91□□□□□ -1.14
SPCS3-201ENST00000503362 C9orf92A6NGG3 77 aa7.91□□□□□ -1.14
SPCS3-201ENST00000503362 LINC00483Q53H64 154 aa7.91□□□□□ -1.14
SPCS3-201ENST00000503362 MIR22HGQ0VDD5 57 aa7.9□□□□□ -1.15
SPCS3-201ENST00000503362 LINC01558Q9Y6Z2 57 aa7.9□□□□□ -1.15
SPCS3-201ENST00000503362 Q8N1X5 172 aa7.89□□□□□ -1.15
SPCS3-201ENST00000503362 Q6ZRN7 208 aaPredicted RBP7.88□□□□□ -1.15
SPCS3-201ENST00000503362 A0A087X002 238 aa7.88□□□□□ -1.15
SPCS3-201ENST00000503362 NOTCH2NLQ7Z3S9 236 aa7.88□□□□□ -1.15
SPCS3-201ENST00000503362 Q5W150 140 aa7.85□□□□□ -1.15
SPCS3-201ENST00000503362 Q6ZR54 194 aa7.85□□□□□ -1.15
SPCS3-201ENST00000503362 ZFHX3Q15911 3703 aa7.84□□□□□ -1.15
SPCS3-201ENST00000503362 KRTAP10-2P60368 255 aa7.83□□□□□ -1.16
SPCS3-201ENST00000503362 KRTAP13-1Q8IUC0 172 aa7.83□□□□□ -1.16
SPCS3-201ENST00000503362 SPINK7P58062 85 aa7.83□□□□□ -1.16
SPCS3-201ENST00000503362 KRTAP10-1P60331 282 aa7.77□□□□□ -1.17
SPCS3-201ENST00000503362 TENM2Q9NT68 2774 aa7.76□□□□□ -1.17
SPCS3-201ENST00000503362 TRRAPQ9Y4A5 3859 aa7.76□□□□□ -1.17
SPCS3-201ENST00000503362 DMBT1Q9UGM3 2413 aaPredicted RBP7.76□□□□□ -1.17
SPCS3-201ENST00000503362 LCA10Q71F78 164 aa7.73□□□□□ -1.17
SPCS3-201ENST00000503362 A8MU10 97 aa7.72□□□□□ -1.17
SPCS3-201ENST00000503362 ANK3Q12955 4377 aaKnown RBP7.72□□□□□ -1.17
SPCS3-201ENST00000503362 TGP01266 2768 aa7.71□□□□□ -1.18
SPCS3-201ENST00000503362 DMAC1Q96GE9 116 aa7.7□□□□□ -1.18
SPCS3-201ENST00000503362 RBM12B-AS1Q9P1G2 102 aa7.7□□□□□ -1.18
SPCS3-201ENST00000503362 PRAC1Q96KF2 57 aa7.65□□□□□ -1.18
SPCS3-201ENST00000503362 ZNF469Q96JG9 3925 aaPredicted RBP7.64□□□□□ -1.19
SPCS3-201ENST00000503362 KRTAP13-2Q52LG2 175 aa7.61□□□□□ -1.19
SPCS3-201ENST00000503362 ASB16-AS1Q495Z4 193 aa7.6□□□□□ -1.19
SPCS3-201ENST00000503362 SRRM2Q9UQ35 2752 aaKnown RBP7.59□□□□□ -1.19
SPCS3-201ENST00000503362 A0A1B0GU33 70 aa7.58□□□□□ -1.2
SPCS3-201ENST00000503362 A0A0D9SG42 100 aa7.54□□□□□ -1.2
SPCS3-201ENST00000503362 A6NN06 94 aa7.5□□□□□ -1.21
SPCS3-201ENST00000503362 FLG2Q5D862 2391 aaPredicted RBP7.47□□□□□ -1.21
SPCS3-201ENST00000503362 LINC01554Q52M75 96 aa7.46□□□□□ -1.21
SPCS3-201ENST00000503362 CSAG1Q6PB30 78 aa7.45□□□□□ -1.22
SPCS3-201ENST00000503362 SPATA8Q6RVD6 105 aa7.45□□□□□ -1.22
SPCS3-201ENST00000503362 SPINT4Q6UDR6 99 aa7.43□□□□□ -1.22
SPCS3-201ENST00000503362 AKAP9Q99996 3911 aa7.43□□□□□ -1.22
SPCS3-201ENST00000503362 FBN3Q75N90 2809 aa7.42□□□□□ -1.22
SPCS3-201ENST00000503362 CRIPTQ9P021 101 aa7.37□□□□□ -1.23
SPCS3-201ENST00000503362 KRTAP1-4P0C5Y4 121 aa7.37□□□□□ -1.23
SPCS3-201ENST00000503362 Q6ZSA8 131 aa7.37□□□□□ -1.23
SPCS3-201ENST00000503362 ADM2Q7Z4H4 148 aa7.37□□□□□ -1.23
SPCS3-201ENST00000503362 H1FX-AS1Q4G0G2 97 aa7.34□□□□□ -1.23
SPCS3-201ENST00000503362 COX6B2Q6YFQ2 88 aa7.34□□□□□ -1.23
SPCS3-201ENST00000503362 RPS29P62273 56 aaKnown RBP7.33□□□□□ -1.24
SPCS3-201ENST00000503362 S4R3F8 94 aa7.31□□□□□ -1.24
SPCS3-201ENST00000503362 MEGF8Q7Z7M0 2845 aa7.31□□□□□ -1.24
SPCS3-201ENST00000503362 Q5VSD8 79 aa7.3□□□□□ -1.24
SPCS3-201ENST00000503362 J3QL48 77 aa7.28□□□□□ -1.24
SPCS3-201ENST00000503362 KRTAP16-1A8MUX0 517 aa7.27□□□□□ -1.25
SPCS3-201ENST00000503362 COL7A1Q02388 2944 aa7.26□□□□□ -1.25
SPCS3-201ENST00000503362 KRTAP13-3Q3SY46 172 aa7.26□□□□□ -1.25
SPCS3-201ENST00000503362 RPL37P61927 97 aaKnown RBP7.24□□□□□ -1.25
SPCS3-201ENST00000503362 CSMD3Q7Z407 3707 aa7.23□□□□□ -1.25
SPCS3-201ENST00000503362 A8MUU9 505 aa7.21□□□□□ -1.25
SPCS3-201ENST00000503362 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
SPCS3-201ENST00000503362 ROMO1P60602 79 aa7.16□□□□□ -1.26
SPCS3-201ENST00000503362 HUWE1Q7Z6Z7 4374 aaKnown RBP7.12□□□□□ -1.27
SPCS3-201ENST00000503362 KRTAP25-1Q3LHN0 102 aa7.08□□□□□ -1.28
SPCS3-201ENST00000503362 H3BS24 57 aa7.07□□□□□ -1.28
SPCS3-201ENST00000503362 R4GN34 69 aa7.06□□□□□ -1.28
SPCS3-201ENST00000503362 H0YAA0 97 aa7.06□□□□□ -1.28
SPCS3-201ENST00000503362 M0QZ58 72 aa7.01□□□□□ -1.29
SPCS3-201ENST00000503362 CAMK2N1Q7Z7J9 78 aa7□□□□□ -1.29
SPCS3-201ENST00000503362 SEC61BP60468 96 aaKnown RBP6.98□□□□□ -1.29
SPCS3-201ENST00000503362 KRTAP21-3Q3LHN1 58 aa6.97□□□□□ -1.29
SPCS3-201ENST00000503362 XP32Q5T750 250 aa6.94□□□□□ -1.3
SPCS3-201ENST00000503362 DNAH10Q8IVF4 4471 aa6.89□□□□□ -1.31
SPCS3-201ENST00000503362 DNAH9Q9NYC9 4486 aa6.87□□□□□ -1.31
SPCS3-201ENST00000503362 A0A1B0GVY2 172 aa6.85□□□□□ -1.31
SPCS3-201ENST00000503362 KRTAP3-1Q9BYR8 98 aa6.84□□□□□ -1.31
SPCS3-201ENST00000503362 PLECQ15149 4684 aaKnown RBP6.83□□□□□ -1.32
SPCS3-201ENST00000503362 P0C880 135 aa6.8□□□□□ -1.32
SPCS3-201ENST00000503362 LUZP6Q538Z0 58 aa6.8□□□□□ -1.32
SPCS3-201ENST00000503362 C10orf95Q9H7T3 257 aa6.79□□□□□ -1.32
SPCS3-201ENST00000503362 KRTAP10-8P60410 259 aa6.78□□□□□ -1.32
SPCS3-201ENST00000503362 M0R2T5 61 aa6.76□□□□□ -1.33
SPCS3-201ENST00000503362 DNAH1Q9P2D7 4330 aa6.74□□□□□ -1.33
SPCS3-201ENST00000503362 ANK2Q01484 3957 aa6.7□□□□□ -1.34
SPCS3-201ENST00000503362 DNAH11Q96DT5 4516 aa6.67□□□□□ -1.34
SPCS3-201ENST00000503362 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
SPCS3-201ENST00000503362 NDUFAF8A1L188 74 aa6.66□□□□□ -1.34
SPCS3-201ENST00000503362 STARD9Q9P2P6 4700 aa6.62□□□□□ -1.35
SPCS3-201ENST00000503362 VPS13DQ5THJ4 4388 aa6.61□□□□□ -1.35
SPCS3-201ENST00000503362 KRTAP10-6P60371 365 aaPredicted RBP6.57□□□□□ -1.36
SPCS3-201ENST00000503362 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
SPCS3-201ENST00000503362 KRTAP12-2P59991 146 aa6.57□□□□□ -1.36
SPCS3-201ENST00000503362 KRTAP10-4P60372 401 aaPredicted RBP6.56□□□□□ -1.36
SPCS3-201ENST00000503362 DNAH17Q9UFH2 4485 aa6.56□□□□□ -1.36
SPCS3-201ENST00000503362 DNAH8Q96JB1 4490 aa6.53□□□□□ -1.36
SPCS3-201ENST00000503362 DNAH5Q8TE73 4624 aa6.53□□□□□ -1.36
SPCS3-201ENST00000503362 LYSTQ99698 3801 aa6.52□□□□□ -1.37
SPCS3-201ENST00000503362 PRKDCP78527 4128 aaKnown RBP6.51□□□□□ -1.37
SPCS3-201ENST00000503362 DNHD1Q96M86 4753 aa6.51□□□□□ -1.37
SPCS3-201ENST00000503362 PLAC4Q8WY50 150 aa6.49□□□□□ -1.37
SPCS3-201ENST00000503362 DNAH3Q8TD57 4116 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms