RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 A0A096LNI7 61 aa6.73□□□□□ -1.33
AC055717.1-201ENST00000502221 VPS13DQ5THJ4 4388 aa6.73□□□□□ -1.33
AC055717.1-201ENST00000502221 NUPR2A6NF83 97 aa6.73□□□□□ -1.33
AC055717.1-201ENST00000502221 CDK2AP2O75956 126 aa6.73□□□□□ -1.33
AC055717.1-201ENST00000502221 DNAH10Q8IVF4 4471 aa6.73□□□□□ -1.33
AC055717.1-201ENST00000502221 MRPL34Q9BQ48 92 aaKnown RBP6.71□□□□□ -1.33
AC055717.1-201ENST00000502221 DNAH6Q9C0G6 4158 aa6.71□□□□□ -1.34
AC055717.1-201ENST00000502221 A0A1B0GVX0 72 aa6.71□□□□□ -1.34
AC055717.1-201ENST00000502221 SPINK7P58062 85 aa6.71□□□□□ -1.34
AC055717.1-201ENST00000502221 ACYP2P14621 99 aa6.7□□□□□ -1.34
AC055717.1-201ENST00000502221 Q96NJ1 140 aa6.69□□□□□ -1.34
AC055717.1-201ENST00000502221 PLA2G1BP04054 148 aaKnown RBP6.69□□□□□ -1.34
AC055717.1-201ENST00000502221 ZNF706Q9Y5V0 76 aaPredicted RBP6.67□□□□□ -1.34
AC055717.1-201ENST00000502221 APLNQ9ULZ1 77 aa6.66□□□□□ -1.34
AC055717.1-201ENST00000502221 C8orf87E5RJ46 101 aa6.65□□□□□ -1.34
AC055717.1-201ENST00000502221 LINC00483Q53H64 154 aa6.64□□□□□ -1.35
AC055717.1-201ENST00000502221 KRTAP13-1Q8IUC0 172 aa6.64□□□□□ -1.35
AC055717.1-201ENST00000502221 LINC00313P59037 77 aa6.64□□□□□ -1.35
AC055717.1-201ENST00000502221 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
AC055717.1-201ENST00000502221 IGHV6-1A0A0B4J1U7 121 aa6.63□□□□□ -1.35
AC055717.1-201ENST00000502221 HERC2O95714 4834 aa6.63□□□□□ -1.35
AC055717.1-201ENST00000502221 HECTD4Q9Y4D8 3996 aa6.62□□□□□ -1.35
AC055717.1-201ENST00000502221 FAT2Q9NYQ8 4349 aa6.62□□□□□ -1.35
AC055717.1-201ENST00000502221 DNAH2Q9P225 4427 aa6.61□□□□□ -1.35
AC055717.1-201ENST00000502221 SPATA8Q6RVD6 105 aa6.61□□□□□ -1.35
AC055717.1-201ENST00000502221 LINC01554Q52M75 96 aa6.59□□□□□ -1.35
AC055717.1-201ENST00000502221 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
AC055717.1-201ENST00000502221 DMAC1Q96GE9 116 aa6.59□□□□□ -1.35
AC055717.1-201ENST00000502221 DNAH17Q9UFH2 4485 aa6.59□□□□□ -1.36
AC055717.1-201ENST00000502221 A0A1B0GU69 56 aa6.58□□□□□ -1.36
AC055717.1-201ENST00000502221 KRTAP11-1Q8IUC1 163 aa6.58□□□□□ -1.36
AC055717.1-201ENST00000502221 PRR26Q8N8Z3 221 aa6.57□□□□□ -1.36
AC055717.1-201ENST00000502221 KIAA1109Q2LD37 5005 aa6.57□□□□□ -1.36
AC055717.1-201ENST00000502221 DYNC1H1Q14204 4646 aaKnown RBP6.57□□□□□ -1.36
AC055717.1-201ENST00000502221 IGLV9-49A0A0B4J1Y8 123 aa6.57□□□□□ -1.36
AC055717.1-201ENST00000502221 UBE2DNLQ8IWF7 75 aa6.57□□□□□ -1.36
AC055717.1-201ENST00000502221 KRTAP13-3Q3SY46 172 aa6.56□□□□□ -1.36
AC055717.1-201ENST00000502221 UQCR11O14957 56 aa6.55□□□□□ -1.36
AC055717.1-201ENST00000502221 RTL8CO15255 209 aa6.55□□□□□ -1.36
AC055717.1-201ENST00000502221 PKHD1P08F94 4074 aa6.54□□□□□ -1.36
AC055717.1-201ENST00000502221 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
AC055717.1-201ENST00000502221 CHTF8P0CG12 524 aa6.53□□□□□ -1.36
AC055717.1-201ENST00000502221 RETNLBQ9BQ08 111 aa6.53□□□□□ -1.36
AC055717.1-201ENST00000502221 KRTAP1-5Q9BYS1 174 aa6.53□□□□□ -1.36
AC055717.1-201ENST00000502221 PKD1P98161 4303 aa6.53□□□□□ -1.36
AC055717.1-201ENST00000502221 FAM229AH3BQW9 127 aa6.52□□□□□ -1.37
AC055717.1-201ENST00000502221 MIR22HGQ0VDD5 57 aa6.52□□□□□ -1.37
AC055717.1-201ENST00000502221 DNAH11Q96DT5 4516 aa6.51□□□□□ -1.37
AC055717.1-201ENST00000502221 PCLOQ9Y6V0 5065 aa6.49□□□□□ -1.37
AC055717.1-201ENST00000502221 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
AC055717.1-201ENST00000502221 Q5W150 140 aa6.49□□□□□ -1.37
AC055717.1-201ENST00000502221 PRAC1Q96KF2 57 aa6.48□□□□□ -1.37
AC055717.1-201ENST00000502221 NBDYA0A0U1RRE5 68 aa6.48□□□□□ -1.37
AC055717.1-201ENST00000502221 SPACA4Q8TDM5 124 aa6.47□□□□□ -1.37
AC055717.1-201ENST00000502221 NOTCH2NLQ7Z3S9 236 aa6.46□□□□□ -1.38
AC055717.1-201ENST00000502221 RYR1P21817 5038 aa6.46□□□□□ -1.38
AC055717.1-201ENST00000502221 ZNF861PO60384 105 aa6.45□□□□□ -1.38
AC055717.1-201ENST00000502221 IGKV2-30P06310 120 aa6.44□□□□□ -1.38
AC055717.1-201ENST00000502221 HSPG2P98160 4391 aa6.43□□□□□ -1.38
AC055717.1-201ENST00000502221 SSBP3-AS1Q7Z2R9 100 aa6.43□□□□□ -1.38
AC055717.1-201ENST00000502221 KRTAP4-5Q9BYR2 181 aa6.43□□□□□ -1.38
AC055717.1-201ENST00000502221 IGLV5-52A0A0A0MRZ9 124 aa6.42□□□□□ -1.38
AC055717.1-201ENST00000502221 LRP1BQ9NZR2 4599 aa6.42□□□□□ -1.38
AC055717.1-201ENST00000502221 C1orf134Q5TEV5 83 aa6.41□□□□□ -1.38
AC055717.1-201ENST00000502221 ABCA13Q86UQ4 5058 aa6.41□□□□□ -1.38
AC055717.1-201ENST00000502221 ADM2Q7Z4H4 148 aa6.4□□□□□ -1.38
AC055717.1-201ENST00000502221 Q6ZRN7 208 aaPredicted RBP6.4□□□□□ -1.39
AC055717.1-201ENST00000502221 DNAH5Q8TE73 4624 aa6.39□□□□□ -1.39
AC055717.1-201ENST00000502221 APOBP04114 4563 aaKnown RBP6.39□□□□□ -1.39
AC055717.1-201ENST00000502221 SPINK6Q6UWN8 80 aa6.38□□□□□ -1.39
AC055717.1-201ENST00000502221 PSORS1C2Q9UIG4 136 aa6.38□□□□□ -1.39
AC055717.1-201ENST00000502221 PANO1I0J062 215 aa6.37□□□□□ -1.39
AC055717.1-201ENST00000502221 IGLV7-43P04211 117 aa6.36□□□□□ -1.39
AC055717.1-201ENST00000502221 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.36□□□□□ -1.39
AC055717.1-201ENST00000502221 H3BS24 57 aa6.35□□□□□ -1.39
AC055717.1-201ENST00000502221 CSAG1Q6PB30 78 aa6.35□□□□□ -1.39
AC055717.1-201ENST00000502221 IGKV2D-30A0A075B6S6 120 aa6.33□□□□□ -1.4
AC055717.1-201ENST00000502221 KRTAP10-2P60368 255 aa6.33□□□□□ -1.4
AC055717.1-201ENST00000502221 CIRBP-AS1Q8TBR5 109 aa6.32□□□□□ -1.4
AC055717.1-201ENST00000502221 A0A087WTM6 91 aa6.31□□□□□ -1.4
AC055717.1-201ENST00000502221 ANAPC11Q9NYG5 84 aa6.28□□□□□ -1.4
AC055717.1-201ENST00000502221 KRTAP16-1A8MUX0 517 aa6.26□□□□□ -1.41
AC055717.1-201ENST00000502221 Q8N1X5 172 aa6.25□□□□□ -1.41
AC055717.1-201ENST00000502221 FAT1Q14517 4588 aa6.23□□□□□ -1.41
AC055717.1-201ENST00000502221 SRRM2Q9UQ35 2752 aaKnown RBP6.22□□□□□ -1.41
AC055717.1-201ENST00000502221 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
AC055717.1-201ENST00000502221 A8MUU9 505 aa6.21□□□□□ -1.42
AC055717.1-201ENST00000502221 KRTAP10-1P60331 282 aa6.21□□□□□ -1.42
AC055717.1-201ENST00000502221 DNAH8Q96JB1 4490 aa6.19□□□□□ -1.42
AC055717.1-201ENST00000502221 VPS13BQ7Z7G8 4022 aa6.16□□□□□ -1.42
AC055717.1-201ENST00000502221 K7ERS5 55 aa6.16□□□□□ -1.42
AC055717.1-201ENST00000502221 SMR3BP02814 79 aaPredicted RBP6.15□□□□□ -1.42
AC055717.1-201ENST00000502221 ROMO1P60602 79 aa6.15□□□□□ -1.42
AC055717.1-201ENST00000502221 Q5VSD8 79 aa6.15□□□□□ -1.43
AC055717.1-201ENST00000502221 Q6ZSA8 131 aa6.14□□□□□ -1.43
AC055717.1-201ENST00000502221 HERC1Q15751 4861 aa6.14□□□□□ -1.43
AC055717.1-201ENST00000502221 A0A1B0GU33 70 aa6.13□□□□□ -1.43
AC055717.1-201ENST00000502221 LINC00304Q8N9R0 145 aa6.13□□□□□ -1.43
AC055717.1-201ENST00000502221 H0YAA0 97 aa6.11□□□□□ -1.43
AC055717.1-201ENST00000502221 MYCBP2O75592 4640 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms