RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
AC055717.1-201ENST00000502221 CCDC180Q9P1Z9 1646 aa20.74■□□□□ 0.91
AC055717.1-201ENST00000502221 ABCC9O60706 1549 aa20.66■□□□□ 0.9
AC055717.1-201ENST00000502221 RB1CC1Q8TDY2 1594 aa19.66■□□□□ 0.74
AC055717.1-201ENST00000502221 NACADO15069 1562 aa19.53■□□□□ 0.72
AC055717.1-201ENST00000502221 DCAF8L2P0C7V8 631 aa19.43■□□□□ 0.7
AC055717.1-201ENST00000502221 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
AC055717.1-201ENST00000502221 DNAJC5BQ9UF47 199 aa19.32■□□□□ 0.68
AC055717.1-201ENST00000502221 MYO15BQ96JP2 1530 aa19.26■□□□□ 0.67
AC055717.1-201ENST00000502221 PABPN1Q86U42 306 aaKnown RBP eCLIP19.23■□□□□ 0.67
AC055717.1-201ENST00000502221 ZCCHC6Q5VYS8 1495 aaKnown RBP19.2■□□□□ 0.66
AC055717.1-201ENST00000502221 BICRAQ9NZM4 1560 aa19.17■□□□□ 0.66
AC055717.1-201ENST00000502221 DCAF1Q9Y4B6 1507 aa19.07■□□□□ 0.64
AC055717.1-201ENST00000502221 SCRIBQ14160 1630 aa18.94■□□□□ 0.62
AC055717.1-201ENST00000502221 SHROOM4Q9ULL8 1493 aa18.76■□□□□ 0.59
AC055717.1-201ENST00000502221 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
AC055717.1-201ENST00000502221 EIF4G1Q04637 1599 aaKnown RBP18.65■□□□□ 0.58
AC055717.1-201ENST00000502221 CECR2Q9BXF3 1484 aa18.56■□□□□ 0.56
AC055717.1-201ENST00000502221 HRCP23327 699 aa18.41■□□□□ 0.54
AC055717.1-201ENST00000502221 PELP1Q8IZL8 1130 aaKnown RBP18.13■□□□□ 0.49
AC055717.1-201ENST00000502221 SMARCA4P51532 1647 aa18.06■□□□□ 0.48
AC055717.1-201ENST00000502221 NCAPD3P42695 1498 aa18.02■□□□□ 0.48
AC055717.1-201ENST00000502221 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
AC055717.1-201ENST00000502221 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
AC055717.1-201ENST00000502221 BAZ1AQ9NRL2 1556 aaPredicted RBP17.93■□□□□ 0.46
AC055717.1-201ENST00000502221 HMGXB3Q12766 1538 aa17.92■□□□□ 0.46
AC055717.1-201ENST00000502221 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
AC055717.1-201ENST00000502221 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
AC055717.1-201ENST00000502221 PEG3Q9GZU2 1588 aa17.85■□□□□ 0.45
AC055717.1-201ENST00000502221 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
AC055717.1-201ENST00000502221 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.44
AC055717.1-201ENST00000502221 PCGF6Q9BYE7 350 aa17.82■□□□□ 0.44
AC055717.1-201ENST00000502221 NESP48681 1621 aa17.81■□□□□ 0.44
AC055717.1-201ENST00000502221 ERCC6Q03468 1493 aa17.76■□□□□ 0.43
AC055717.1-201ENST00000502221 WIZO95785 1651 aa17.7■□□□□ 0.42
AC055717.1-201ENST00000502221 CUX2O14529 1486 aa17.7■□□□□ 0.42
AC055717.1-201ENST00000502221 ZEB1P37275 1124 aaPredicted RBP17.66■□□□□ 0.42
AC055717.1-201ENST00000502221 LAMC3Q9Y6N6 1575 aa17.63■□□□□ 0.41
AC055717.1-201ENST00000502221 KIF21AQ7Z4S6 1674 aa17.62■□□□□ 0.41
AC055717.1-201ENST00000502221 THOC2Q8NI27 1593 aaKnown RBP17.62■□□□□ 0.41
AC055717.1-201ENST00000502221 PPARGC1BQ86YN6 1023 aaKnown RBP17.6■□□□□ 0.41
AC055717.1-201ENST00000502221 MYT1Q01538 1121 aa17.59■□□□□ 0.41
AC055717.1-201ENST00000502221 TRIM26Q12899 539 aaPredicted RBP17.57■□□□□ 0.4
AC055717.1-201ENST00000502221 DNAJC5Q9H3Z4 198 aa17.57■□□□□ 0.4
AC055717.1-201ENST00000502221 RSF1Q96T23 1441 aaPredicted RBP17.48■□□□□ 0.39
AC055717.1-201ENST00000502221 CADPSQ9ULU8 1353 aa17.47■□□□□ 0.39
AC055717.1-201ENST00000502221 PDS5BQ9NTI5 1447 aa17.46■□□□□ 0.38
AC055717.1-201ENST00000502221 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
AC055717.1-201ENST00000502221 MRC2Q9UBG0 1479 aa17.35■□□□□ 0.37
AC055717.1-201ENST00000502221 WDR62O43379 1518 aa17.34■□□□□ 0.37
AC055717.1-201ENST00000502221 CFTRP13569 1480 aa17.31■□□□□ 0.36
AC055717.1-201ENST00000502221 FANCD2Q9BXW9 1451 aa17.3■□□□□ 0.36
AC055717.1-201ENST00000502221 CEP164Q9UPV0 1460 aa17.3■□□□□ 0.36
AC055717.1-201ENST00000502221 PRDM2Q13029 1718 aa17.25■□□□□ 0.35
AC055717.1-201ENST00000502221 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
AC055717.1-201ENST00000502221 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.35
AC055717.1-201ENST00000502221 URB2Q14146 1524 aaKnown RBP17.2■□□□□ 0.34
AC055717.1-201ENST00000502221 LOC105371045A0A1W2PR82 267 aa17.17■□□□□ 0.34
AC055717.1-201ENST00000502221 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
AC055717.1-201ENST00000502221 ACIN1Q9UKV3 1341 aaKnown RBP17■□□□□ 0.31
AC055717.1-201ENST00000502221 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
AC055717.1-201ENST00000502221 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
AC055717.1-201ENST00000502221 CENPBP07199 599 aaPredicted RBP16.95■□□□□ 0.3
AC055717.1-201ENST00000502221 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
AC055717.1-201ENST00000502221 EIF4G3O43432 1585 aaKnown RBP16.91■□□□□ 0.3
AC055717.1-201ENST00000502221 TARBP1Q13395 1621 aaKnown RBP16.89■□□□□ 0.29
AC055717.1-201ENST00000502221 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
AC055717.1-201ENST00000502221 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
AC055717.1-201ENST00000502221 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
AC055717.1-201ENST00000502221 POLA1P09884 1462 aaPredicted RBP16.84■□□□□ 0.29
AC055717.1-201ENST00000502221 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.28
AC055717.1-201ENST00000502221 CHD1O14646 1710 aa16.81■□□□□ 0.28
AC055717.1-201ENST00000502221 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
AC055717.1-201ENST00000502221 CUX1P39880 1505 aa16.78■□□□□ 0.28
AC055717.1-201ENST00000502221 RIMBP3CA6NJZ7 1639 aa16.77■□□□□ 0.28
AC055717.1-201ENST00000502221 RIMBP3BA6NNM3 1639 aa16.77■□□□□ 0.28
AC055717.1-201ENST00000502221 RIMBP3Q9UFD9 1639 aa16.77■□□□□ 0.28
AC055717.1-201ENST00000502221 FGD5Q6ZNL6 1462 aa16.76■□□□□ 0.27
AC055717.1-201ENST00000502221 NEUROD1Q13562 356 aa16.75■□□□□ 0.27
AC055717.1-201ENST00000502221 SOGA1O94964 1423 aa16.72■□□□□ 0.27
AC055717.1-201ENST00000502221 GTF3C3Q9Y5Q9 886 aa16.71■□□□□ 0.27
AC055717.1-201ENST00000502221 WDR97A6NE52 1622 aa16.71■□□□□ 0.26
AC055717.1-201ENST00000502221 TDRD9Q8NDG6 1382 aaKnown RBP16.7■□□□□ 0.26
AC055717.1-201ENST00000502221 ARHGEF11O15085 1522 aa16.69■□□□□ 0.26
AC055717.1-201ENST00000502221 DIEXFQ68CQ4 756 aaKnown RBP16.68■□□□□ 0.26
AC055717.1-201ENST00000502221 SNAPC4Q5SXM2 1469 aa16.65■□□□□ 0.26
AC055717.1-201ENST00000502221 CCER1Q8TC90 406 aaPredicted RBP16.64■□□□□ 0.25
AC055717.1-201ENST00000502221 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
AC055717.1-201ENST00000502221 FBLN2P98095 1184 aa16.62■□□□□ 0.25
AC055717.1-201ENST00000502221 ABCA5Q8WWZ7 1642 aa16.57■□□□□ 0.24
AC055717.1-201ENST00000502221 GRIN2BQ13224 1484 aa16.56■□□□□ 0.24
AC055717.1-201ENST00000502221 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
AC055717.1-201ENST00000502221 ARAP1Q96P48 1450 aa16.55■□□□□ 0.24
AC055717.1-201ENST00000502221 MAGI1Q96QZ7 1491 aaPredicted RBP16.55■□□□□ 0.24
AC055717.1-201ENST00000502221 BIVM-ERCC5R4GMW8 1640 aa16.54■□□□□ 0.24
AC055717.1-201ENST00000502221 ABCA10Q8WWZ4 1543 aa16.54■□□□□ 0.24
AC055717.1-201ENST00000502221 TTBK1Q5TCY1 1321 aaPredicted RBP16.54■□□□□ 0.24
AC055717.1-201ENST00000502221 SYNJ1O43426 1573 aa16.54■□□□□ 0.24
AC055717.1-201ENST00000502221 GAPVD1Q14C86 1478 aa16.53■□□□□ 0.24
AC055717.1-201ENST00000502221 TOP2BQ02880 1626 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms