RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 IGHV6-1A0A0B4J1U7 121 aa4.21□□□□□ -1.73
LYSMD3-203ENST00000500869 FBN3Q75N90 2809 aa4.21□□□□□ -1.73
LYSMD3-203ENST00000500869 CDK2AP2O75956 126 aa4.21□□□□□ -1.74
LYSMD3-203ENST00000500869 PSPHP1O15172 72 aa4.21□□□□□ -1.74
LYSMD3-203ENST00000500869 A0A087X002 238 aa4.21□□□□□ -1.74
LYSMD3-203ENST00000500869 NOTCH2NLQ7Z3S9 236 aa4.21□□□□□ -1.74
LYSMD3-203ENST00000500869 NOTCH1P46531 2555 aa4.2□□□□□ -1.74
LYSMD3-203ENST00000500869 C1orf134Q5TEV5 83 aa4.2□□□□□ -1.74
LYSMD3-203ENST00000500869 HRES1P13985 223 aa4.2□□□□□ -1.74
LYSMD3-203ENST00000500869 STAB2Q8WWQ8 2551 aa4.2□□□□□ -1.74
LYSMD3-203ENST00000500869 PRR26Q8N8Z3 221 aa4.19□□□□□ -1.74
LYSMD3-203ENST00000500869 KMT2AQ03164 3969 aa4.19□□□□□ -1.74
LYSMD3-203ENST00000500869 PKD1P98161 4303 aa4.19□□□□□ -1.74
LYSMD3-203ENST00000500869 SACSQ9NZJ4 4579 aa4.19□□□□□ -1.74
LYSMD3-203ENST00000500869 KRTAP16-1A8MUX0 517 aa4.18□□□□□ -1.74
LYSMD3-203ENST00000500869 Q5W150 140 aa4.18□□□□□ -1.74
LYSMD3-203ENST00000500869 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
LYSMD3-203ENST00000500869 PCOTHQ58A44 107 aa4.17□□□□□ -1.74
LYSMD3-203ENST00000500869 DMAC1Q96GE9 116 aa4.17□□□□□ -1.74
LYSMD3-203ENST00000500869 CDC42SE1Q9NRR8 79 aa4.17□□□□□ -1.74
LYSMD3-203ENST00000500869 ANAPC11Q9NYG5 84 aa4.16□□□□□ -1.74
LYSMD3-203ENST00000500869 SRRM2Q9UQ35 2752 aaKnown RBP4.16□□□□□ -1.74
LYSMD3-203ENST00000500869 FAT2Q9NYQ8 4349 aa4.16□□□□□ -1.74
LYSMD3-203ENST00000500869 ATP11AUNQ6ZP68 121 aa4.16□□□□□ -1.74
LYSMD3-203ENST00000500869 FAM229AH3BQW9 127 aa4.15□□□□□ -1.74
LYSMD3-203ENST00000500869 KRTAP13-2Q52LG2 175 aa4.15□□□□□ -1.74
LYSMD3-203ENST00000500869 LCA10Q71F78 164 aa4.15□□□□□ -1.75
LYSMD3-203ENST00000500869 CHKB-CPT1BH3BT56 60 aa4.14□□□□□ -1.75
LYSMD3-203ENST00000500869 NDUFS5O43920 106 aa4.14□□□□□ -1.75
LYSMD3-203ENST00000500869 IGKV2-30P06310 120 aa4.14□□□□□ -1.75
LYSMD3-203ENST00000500869 CIRBP-AS1Q8TBR5 109 aa4.14□□□□□ -1.75
LYSMD3-203ENST00000500869 COL6A5A8TX70 2615 aa4.14□□□□□ -1.75
LYSMD3-203ENST00000500869 KRTAP1-4P0C5Y4 121 aa4.14□□□□□ -1.75
LYSMD3-203ENST00000500869 PMAIP1Q13794 54 aa4.14□□□□□ -1.75
LYSMD3-203ENST00000500869 DNHD1Q96M86 4753 aa4.13□□□□□ -1.75
LYSMD3-203ENST00000500869 RPS29P62273 56 aaKnown RBP4.13□□□□□ -1.75
LYSMD3-203ENST00000500869 ACYP2P14621 99 aa4.13□□□□□ -1.75
LYSMD3-203ENST00000500869 LINC00313P59037 77 aa4.12□□□□□ -1.75
LYSMD3-203ENST00000500869 A6NN06 94 aa4.12□□□□□ -1.75
LYSMD3-203ENST00000500869 KRTAP10-2P60368 255 aa4.12□□□□□ -1.75
LYSMD3-203ENST00000500869 A8MU10 97 aa4.11□□□□□ -1.75
LYSMD3-203ENST00000500869 PKHD1L1Q86WI1 4243 aa4.1□□□□□ -1.75
LYSMD3-203ENST00000500869 MGAM2Q2M2H8 2515 aa4.09□□□□□ -1.75
LYSMD3-203ENST00000500869 SPAG11AQ6PDA7 123 aa4.09□□□□□ -1.75
LYSMD3-203ENST00000500869 KRTAP10-1P60331 282 aa4.09□□□□□ -1.76
LYSMD3-203ENST00000500869 A6NED7 52 aa4.08□□□□□ -1.76
LYSMD3-203ENST00000500869 SPINK6Q6UWN8 80 aa4.08□□□□□ -1.76
LYSMD3-203ENST00000500869 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
LYSMD3-203ENST00000500869 LRP1BQ9NZR2 4599 aa4.07□□□□□ -1.76
LYSMD3-203ENST00000500869 SPINK7P58062 85 aa4.06□□□□□ -1.76
LYSMD3-203ENST00000500869 LY6G6CO95867 125 aa4.06□□□□□ -1.76
LYSMD3-203ENST00000500869 SPINK1P00995 79 aa4.06□□□□□ -1.76
LYSMD3-203ENST00000500869 IGKV2D-30A0A075B6S6 120 aa4.05□□□□□ -1.76
LYSMD3-203ENST00000500869 MEGF8Q7Z7M0 2845 aa4.05□□□□□ -1.76
LYSMD3-203ENST00000500869 HYDINQ4G0P3 5121 aa4.04□□□□□ -1.76
LYSMD3-203ENST00000500869 VPS13BQ7Z7G8 4022 aa4.03□□□□□ -1.76
LYSMD3-203ENST00000500869 SPATA8Q6RVD6 105 aa4.03□□□□□ -1.76
LYSMD3-203ENST00000500869 KRTAP21-3Q3LHN1 58 aa4.02□□□□□ -1.77
LYSMD3-203ENST00000500869 PKHD1P08F94 4074 aa4.02□□□□□ -1.77
LYSMD3-203ENST00000500869 APOBP04114 4563 aaKnown RBP4.02□□□□□ -1.77
LYSMD3-203ENST00000500869 SEC61GP60059 68 aa4.02□□□□□ -1.77
LYSMD3-203ENST00000500869 C7orf65Q6ZTY9 151 aa4.01□□□□□ -1.77
LYSMD3-203ENST00000500869 TYMSOSQ8TAI1 123 aa3.99□□□□□ -1.77
LYSMD3-203ENST00000500869 LCE2DQ5TA82 110 aaPredicted RBP3.99□□□□□ -1.77
LYSMD3-203ENST00000500869 C20orf166-AS1Q96NR2 134 aa3.98□□□□□ -1.77
LYSMD3-203ENST00000500869 A8MUU9 505 aa3.98□□□□□ -1.77
LYSMD3-203ENST00000500869 A0A1B0GU69 56 aa3.98□□□□□ -1.77
LYSMD3-203ENST00000500869 KRTAP10-4P60372 401 aaPredicted RBP3.98□□□□□ -1.77
LYSMD3-203ENST00000500869 SPTSSBQ8NFR3 76 aa3.97□□□□□ -1.77
LYSMD3-203ENST00000500869 PLA2G1BP04054 148 aaKnown RBP3.97□□□□□ -1.77
LYSMD3-203ENST00000500869 C4orf48Q5BLP8 95 aa3.96□□□□□ -1.77
LYSMD3-203ENST00000500869 LINC00304Q8N9R0 145 aa3.96□□□□□ -1.77
LYSMD3-203ENST00000500869 DYNC1H1Q14204 4646 aaKnown RBP3.96□□□□□ -1.77
LYSMD3-203ENST00000500869 A0A1B0GVY2 172 aa3.95□□□□□ -1.78
LYSMD3-203ENST00000500869 UQCR11O14957 56 aa3.94□□□□□ -1.78
LYSMD3-203ENST00000500869 RBM12B-AS1Q9P1G2 102 aa3.94□□□□□ -1.78
LYSMD3-203ENST00000500869 RETNLBQ9BQ08 111 aa3.93□□□□□ -1.78
LYSMD3-203ENST00000500869 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
LYSMD3-203ENST00000500869 TNXBP22105 4242 aa3.91□□□□□ -1.78
LYSMD3-203ENST00000500869 TGP01266 2768 aa3.9□□□□□ -1.79
LYSMD3-203ENST00000500869 HSPG2P98160 4391 aa3.89□□□□□ -1.79
LYSMD3-203ENST00000500869 KRTAP3-1Q9BYR8 98 aa3.88□□□□□ -1.79
LYSMD3-203ENST00000500869 FAT1Q14517 4588 aa3.85□□□□□ -1.79
LYSMD3-203ENST00000500869 Q8N1X5 172 aa3.84□□□□□ -1.79
LYSMD3-203ENST00000500869 RYR2Q92736 4967 aa3.83□□□□□ -1.8
LYSMD3-203ENST00000500869 FAT3Q8TDW7 4589 aa3.83□□□□□ -1.8
LYSMD3-203ENST00000500869 H0YAA0 97 aa3.82□□□□□ -1.8
LYSMD3-203ENST00000500869 COX6B2Q6YFQ2 88 aa3.82□□□□□ -1.8
LYSMD3-203ENST00000500869 H1FX-AS1Q4G0G2 97 aa3.8□□□□□ -1.8
LYSMD3-203ENST00000500869 KRTAP10-8P60410 259 aa3.79□□□□□ -1.8
LYSMD3-203ENST00000500869 C9orf92A6NGG3 77 aa3.78□□□□□ -1.8
LYSMD3-203ENST00000500869 ADM2Q7Z4H4 148 aa3.77□□□□□ -1.81
LYSMD3-203ENST00000500869 A0A1B0GU33 70 aa3.77□□□□□ -1.81
LYSMD3-203ENST00000500869 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
LYSMD3-203ENST00000500869 LRP1Q07954 4544 aaKnown RBP3.77□□□□□ -1.81
LYSMD3-203ENST00000500869 SMR3BP02814 79 aaPredicted RBP3.76□□□□□ -1.81
LYSMD3-203ENST00000500869 RPL37P61927 97 aaKnown RBP3.76□□□□□ -1.81
LYSMD3-203ENST00000500869 KMT2CQ8NEZ4 4911 aaKnown RBP3.76□□□□□ -1.81
LYSMD3-203ENST00000500869 LINC01554Q52M75 96 aa3.74□□□□□ -1.81
LYSMD3-203ENST00000500869 KRTAP3-3Q9BYR6 98 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms