RNA–Protein interactions for RNA: ENST00000497715.1

CUL3-212, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 2,400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-212ENST00000497715 IGKV2-30P06310 120 aa2.59□□□□□ -1.99
CUL3-212ENST00000497715 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
CUL3-212ENST00000497715 BSNQ9UPA5 3926 aa2.59□□□□□ -1.99
CUL3-212ENST00000497715 ABCA12Q86UK0 2595 aa2.59□□□□□ -2
CUL3-212ENST00000497715 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -2
CUL3-212ENST00000497715 APLNQ9ULZ1 77 aa2.59□□□□□ -2
CUL3-212ENST00000497715 PTPN13Q12923 2485 aa2.58□□□□□ -2
CUL3-212ENST00000497715 IGKV2D-30A0A075B6S6 120 aa2.57□□□□□ -2
CUL3-212ENST00000497715 UBE2DNLQ8IWF7 75 aa2.57□□□□□ -2
CUL3-212ENST00000497715 CEP290O15078 2479 aa2.56□□□□□ -2
CUL3-212ENST00000497715 TEX15Q9BXT5 2789 aa2.56□□□□□ -2
CUL3-212ENST00000497715 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
CUL3-212ENST00000497715 KRTAP7-1Q8IUC3 87 aa2.56□□□□□ -2
CUL3-212ENST00000497715 PKD1L2Q7Z442 2459 aa2.56□□□□□ -2
CUL3-212ENST00000497715 APCP25054 2843 aa2.54□□□□□ -2
CUL3-212ENST00000497715 SONP18583 2426 aaKnown RBP2.53□□□□□ -2
CUL3-212ENST00000497715 ABCA2Q9BZC7 2435 aa2.53□□□□□ -2
CUL3-212ENST00000497715 UTP20O75691 2785 aaKnown RBP2.53□□□□□ -2
CUL3-212ENST00000497715 SPTAN1Q13813 2472 aaKnown RBP2.53□□□□□ -2
CUL3-212ENST00000497715 KRTAP13-4Q3LI77 160 aa2.53□□□□□ -2
CUL3-212ENST00000497715 UNC79Q9P2D8 2635 aa2.53□□□□□ -2
CUL3-212ENST00000497715 H3BUA1 57 aa2.52□□□□□ -2.01
CUL3-212ENST00000497715 INE1O15225 51 aa2.52□□□□□ -2.01
CUL3-212ENST00000497715 DEFB103AP81534 67 aa2.52□□□□□ -2.01
CUL3-212ENST00000497715 VPS13CQ709C8 3753 aa2.52□□□□□ -2.01
CUL3-212ENST00000497715 S4R3F8 94 aa2.51□□□□□ -2.01
CUL3-212ENST00000497715 SPINK6Q6UWN8 80 aa2.5□□□□□ -2.01
CUL3-212ENST00000497715 NCOR2Q9Y618 2525 aa2.5□□□□□ -2.01
CUL3-212ENST00000497715 KRTAP3-1Q9BYR8 98 aa2.5□□□□□ -2.01
CUL3-212ENST00000497715 MEGF8Q7Z7M0 2845 aa2.5□□□□□ -2.01
CUL3-212ENST00000497715 HECTD1Q9ULT8 2610 aa2.49□□□□□ -2.01
CUL3-212ENST00000497715 SPRR1BP22528 89 aa2.49□□□□□ -2.01
CUL3-212ENST00000497715 KRTAP12-2P59991 146 aa2.49□□□□□ -2.01
CUL3-212ENST00000497715 PDZD2O15018 2839 aa2.48□□□□□ -2.01
CUL3-212ENST00000497715 HIVEP3Q5T1R4 2406 aa2.47□□□□□ -2.01
CUL3-212ENST00000497715 PRO0255Q9UI72 69 aa2.47□□□□□ -2.01
CUL3-212ENST00000497715 USP9XQ93008 2570 aaPredicted RBP2.47□□□□□ -2.01
CUL3-212ENST00000497715 SETD2Q9BYW2 2564 aaPredicted RBP2.47□□□□□ -2.01
CUL3-212ENST00000497715 DEFB123Q8N688 67 aa2.47□□□□□ -2.01
CUL3-212ENST00000497715 U3KQA8 63 aa2.47□□□□□ -2.01
CUL3-212ENST00000497715 BDP1A6H8Y1 2624 aa2.46□□□□□ -2.02
CUL3-212ENST00000497715 ZNF292O60281 2723 aa2.46□□□□□ -2.02
CUL3-212ENST00000497715 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
CUL3-212ENST00000497715 LYSTQ99698 3801 aa2.44□□□□□ -2.02
CUL3-212ENST00000497715 H3BUX3 64 aa2.44□□□□□ -2.02
CUL3-212ENST00000497715 COL6A5A8TX70 2615 aa2.44□□□□□ -2.02
CUL3-212ENST00000497715 COL7A1Q02388 2944 aa2.43□□□□□ -2.02
CUL3-212ENST00000497715 TLN1Q9Y490 2541 aaKnown RBP2.43□□□□□ -2.02
CUL3-212ENST00000497715 FRAS1Q86XX4 4008 aa2.43□□□□□ -2.02
CUL3-212ENST00000497715 ANKHD1Q8IWZ3 2542 aaKnown RBP2.42□□□□□ -2.02
CUL3-212ENST00000497715 NBEAL2Q6ZNJ1 2754 aa2.42□□□□□ -2.02
CUL3-212ENST00000497715 TRRAPQ9Y4A5 3859 aa2.42□□□□□ -2.02
CUL3-212ENST00000497715 KRTAP10-7P60409 375 aaPredicted RBP2.41□□□□□ -2.02
CUL3-212ENST00000497715 VPS13DQ5THJ4 4388 aa2.41□□□□□ -2.02
CUL3-212ENST00000497715 KRTAP10-6P60371 365 aaPredicted RBP2.41□□□□□ -2.02
CUL3-212ENST00000497715 CACNA1AO00555 2505 aa2.41□□□□□ -2.02
CUL3-212ENST00000497715 DEFB4AO15263 64 aa2.4□□□□□ -2.03
CUL3-212ENST00000497715 KRTAP12-1P59990 96 aa2.39□□□□□ -2.03
CUL3-212ENST00000497715 NIPBLQ6KC79 2804 aaeCLIP2.39□□□□□ -2.03
CUL3-212ENST00000497715 USP9YO00507 2555 aaPredicted RBP2.38□□□□□ -2.03
CUL3-212ENST00000497715 HTN3P15516 51 aa2.38□□□□□ -2.03
CUL3-212ENST00000497715 MTORP42345 2549 aa2.35□□□□□ -2.03
CUL3-212ENST00000497715 PIEZO1Q92508 2521 aa2.35□□□□□ -2.03
CUL3-212ENST00000497715 HELZ2Q9BYK8 2649 aaKnown RBP2.35□□□□□ -2.03
CUL3-212ENST00000497715 DNAH11Q96DT5 4516 aa2.35□□□□□ -2.03
CUL3-212ENST00000497715 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
CUL3-212ENST00000497715 LRRK2Q5S007 2527 aa2.35□□□□□ -2.03
CUL3-212ENST00000497715 CFAP46Q8IYW2 2715 aa2.35□□□□□ -2.03
CUL3-212ENST00000497715 CHD8Q9HCK8 2581 aa2.35□□□□□ -2.03
CUL3-212ENST00000497715 MXRA5Q9NR99 2828 aa2.34□□□□□ -2.03
CUL3-212ENST00000497715 EPG5Q9HCE0 2579 aa2.34□□□□□ -2.03
CUL3-212ENST00000497715 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
CUL3-212ENST00000497715 NBEAL1Q6ZS30 2694 aa2.34□□□□□ -2.04
CUL3-212ENST00000497715 DNAH8Q96JB1 4490 aa2.34□□□□□ -2.04
CUL3-212ENST00000497715 ANK2Q01484 3957 aa2.33□□□□□ -2.04
CUL3-212ENST00000497715 ATRQ13535 2644 aa2.33□□□□□ -2.04
CUL3-212ENST00000497715 ZFYVE26Q68DK2 2539 aa2.33□□□□□ -2.04
CUL3-212ENST00000497715 KRTAP10-9P60411 292 aa2.33□□□□□ -2.04
CUL3-212ENST00000497715 PKD1L1Q8TDX9 2849 aa2.33□□□□□ -2.04
CUL3-212ENST00000497715 TLN2Q9Y4G6 2542 aa2.33□□□□□ -2.04
CUL3-212ENST00000497715 MYCBP2O75592 4640 aa2.32□□□□□ -2.04
CUL3-212ENST00000497715 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
CUL3-212ENST00000497715 SETXQ7Z333 2677 aaKnown RBP2.32□□□□□ -2.04
CUL3-212ENST00000497715 FBN2P35556 2912 aa2.32□□□□□ -2.04
CUL3-212ENST00000497715 HIVEP1P15822 2718 aa2.31□□□□□ -2.04
CUL3-212ENST00000497715 ITPR2Q14571 2701 aa2.31□□□□□ -2.04
CUL3-212ENST00000497715 DNAH10Q8IVF4 4471 aa2.31□□□□□ -2.04
CUL3-212ENST00000497715 ZANQ9Y493 2812 aa2.31□□□□□ -2.04
CUL3-212ENST00000497715 KRTAP10-11P60412 298 aa2.3□□□□□ -2.04
CUL3-212ENST00000497715 MAPK1IP1LQ8NDC0 245 aa2.3□□□□□ -2.04
CUL3-212ENST00000497715 ITPR3Q14573 2671 aa2.3□□□□□ -2.04
CUL3-212ENST00000497715 HRNRQ86YZ3 2850 aaPredicted RBP2.29□□□□□ -2.04
CUL3-212ENST00000497715 KRTAP13-1Q8IUC0 172 aa2.29□□□□□ -2.04
CUL3-212ENST00000497715 GCN1Q92616 2671 aaKnown RBP2.29□□□□□ -2.04
CUL3-212ENST00000497715 TGP01266 2768 aa2.28□□□□□ -2.04
CUL3-212ENST00000497715 POLQO75417 2590 aa2.28□□□□□ -2.04
CUL3-212ENST00000497715 KRTAP13-2Q52LG2 175 aa2.27□□□□□ -2.05
CUL3-212ENST00000497715 USP24Q9UPU5 2620 aa2.26□□□□□ -2.05
CUL3-212ENST00000497715 DOPEY1Q5JWR5 2465 aa2.26□□□□□ -2.05
CUL3-212ENST00000497715 CENPEQ02224 2701 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms