RNA–Protein interactions for RNA: ENST00000497715.1

CUL3-212, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 2,400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-212ENST00000497715 POTEDQ86YR6 584 aa11.96□□□□□ -0.49
CUL3-212ENST00000497715 AEBP2Q6ZN18 517 aaPredicted RBP11.7□□□□□ -0.54
CUL3-212ENST00000497715 CHIC1Q5VXU3 224 aa10.9□□□□□ -0.66
CUL3-212ENST00000497715 SENP3Q9H4L4 574 aaPredicted RBP10.06□□□□□ -0.8
CUL3-212ENST00000497715 PHF23Q9BUL5 403 aaPredicted RBP9.82□□□□□ -0.84
CUL3-212ENST00000497715 SLC24A1O60721 1099 aa9.55□□□□□ -0.88
CUL3-212ENST00000497715 FOXD1Q16676 465 aa9.42□□□□□ -0.9
CUL3-212ENST00000497715 PELP1Q8IZL8 1130 aaKnown RBP9.35□□□□□ -0.91
CUL3-212ENST00000497715 PRKCSHP14314 528 aaPredicted RBP9.34□□□□□ -0.91
CUL3-212ENST00000497715 MYT1Q01538 1121 aa9.27□□□□□ -0.92
CUL3-212ENST00000497715 MSH5O43196 834 aa9.13□□□□□ -0.95
CUL3-212ENST00000497715 TTBK1Q5TCY1 1321 aaPredicted RBP9.05□□□□□ -0.96
CUL3-212ENST00000497715 POTEHQ6S545 545 aa9.04□□□□□ -0.96
CUL3-212ENST00000497715 APLP2Q06481 763 aa9.03□□□□□ -0.96
CUL3-212ENST00000497715 ERICH6Q7L0X2 663 aa8.89□□□□□ -0.99
CUL3-212ENST00000497715 DAXXQ9UER7 740 aaPredicted RBP8.88□□□□□ -0.99
CUL3-212ENST00000497715 CACNB1Q02641 598 aaPredicted RBP8.87□□□□□ -0.99
CUL3-212ENST00000497715 BCL11AQ9H165 835 aa8.72□□□□□ -1.01
CUL3-212ENST00000497715 FAM9AQ8IZU1 332 aaPredicted RBP8.65□□□□□ -1.02
CUL3-212ENST00000497715 PIAS4Q8N2W9 510 aaPredicted RBP8.62□□□□□ -1.03
CUL3-212ENST00000497715 PLEKHG5O94827 1062 aa8.58□□□□□ -1.04
CUL3-212ENST00000497715 EIF5BO60841 1220 aaKnown RBP8.56□□□□□ -1.04
CUL3-212ENST00000497715 PLPPR3Q6T4P5 718 aa8.51□□□□□ -1.05
CUL3-212ENST00000497715 PPP6R1Q9UPN7 881 aa8.43□□□□□ -1.06
CUL3-212ENST00000497715 NCBP3Q53F19 620 aaKnown RBP8.36□□□□□ -1.07
CUL3-212ENST00000497715 ADRA2BP18089 450 aa8.35□□□□□ -1.07
CUL3-212ENST00000497715 RTN4Q9NQC3 1192 aaKnown RBP8.35□□□□□ -1.07
CUL3-212ENST00000497715 SCAF1Q9H7N4 1312 aaKnown RBP8.34□□□□□ -1.07
CUL3-212ENST00000497715 EHMT2Q96KQ7 1210 aa8.34□□□□□ -1.07
CUL3-212ENST00000497715 KLHL34Q8N239 644 aa8.32□□□□□ -1.08
CUL3-212ENST00000497715 TIMELESSQ9UNS1 1208 aa8.26□□□□□ -1.09
CUL3-212ENST00000497715 PLSCR2Q9NRY7 297 aa8.24□□□□□ -1.09
CUL3-212ENST00000497715 PODXL2Q9NZ53 605 aa8.22□□□□□ -1.09
CUL3-212ENST00000497715 ANO8Q9HCE9 1232 aaPredicted RBP8.11□□□□□ -1.11
CUL3-212ENST00000497715 HRCP23327 699 aa8.09□□□□□ -1.11
CUL3-212ENST00000497715 ARXQ96QS3 562 aa8.09□□□□□ -1.11
CUL3-212ENST00000497715 UBE2Q2Q8WVN8 375 aa8.08□□□□□ -1.12
CUL3-212ENST00000497715 TULP1O00294 542 aaPredicted RBP8.05□□□□□ -1.12
CUL3-212ENST00000497715 RANGAP1P46060 587 aaPredicted RBP8.04□□□□□ -1.12
CUL3-212ENST00000497715 CENPBP07199 599 aaPredicted RBP8.03□□□□□ -1.12
CUL3-212ENST00000497715 PPARGC1BQ86YN6 1023 aaKnown RBP8.01□□□□□ -1.13
CUL3-212ENST00000497715 PKNOX2Q96KN3 472 aa7.98□□□□□ -1.13
CUL3-212ENST00000497715 PDIA4P13667 645 aaKnown RBP7.94□□□□□ -1.14
CUL3-212ENST00000497715 CSRNP3Q8WYN3 585 aa7.93□□□□□ -1.14
CUL3-212ENST00000497715 DMRT2Q9Y5R5 561 aa7.91□□□□□ -1.14
CUL3-212ENST00000497715 ANP32EQ9BTT0 268 aa7.91□□□□□ -1.14
CUL3-212ENST00000497715 PDE4CQ08493 712 aa7.89□□□□□ -1.15
CUL3-212ENST00000497715 CCDC136Q96JN2 1154 aa7.87□□□□□ -1.15
CUL3-212ENST00000497715 HOMEZQ8IX15 550 aa7.85□□□□□ -1.15
CUL3-212ENST00000497715 BCL11BQ9C0K0 894 aaPredicted RBP7.84□□□□□ -1.15
CUL3-212ENST00000497715 MAPK8IP2Q13387 824 aaPredicted RBP7.82□□□□□ -1.16
CUL3-212ENST00000497715 SALL2Q9Y467 1007 aaPredicted RBP7.82□□□□□ -1.16
CUL3-212ENST00000497715 LOC105371045A0A1W2PR82 267 aa7.81□□□□□ -1.16
CUL3-212ENST00000497715 DHX37Q8IY37 1157 aaKnown RBP7.81□□□□□ -1.16
CUL3-212ENST00000497715 KCNA4P22459 653 aa7.8□□□□□ -1.16
CUL3-212ENST00000497715 HAP1P54257 671 aaPredicted RBP7.79□□□□□ -1.16
CUL3-212ENST00000497715 TAOK2Q9UL54 1235 aa7.78□□□□□ -1.16
CUL3-212ENST00000497715 AMER1Q5JTC6 1135 aaPredicted RBP7.77□□□□□ -1.17
CUL3-212ENST00000497715 CHMP4AQ9BY43 222 aa7.77□□□□□ -1.17
CUL3-212ENST00000497715 GTF3C3Q9Y5Q9 886 aa7.76□□□□□ -1.17
CUL3-212ENST00000497715 NPM2Q86SE8 214 aaKnown RBP7.76□□□□□ -1.17
CUL3-212ENST00000497715 NEFLP07196 543 aa7.75□□□□□ -1.17
CUL3-212ENST00000497715 A0A0U1RQG5 324 aaPredicted RBP7.73□□□□□ -1.17
CUL3-212ENST00000497715 ACIN1Q9UKV3 1341 aaKnown RBP7.73□□□□□ -1.17
CUL3-212ENST00000497715 FGD1P98174 961 aa7.72□□□□□ -1.17
CUL3-212ENST00000497715 C14orf37Q86TY3 774 aa7.72□□□□□ -1.17
CUL3-212ENST00000497715 TPRNQ4KMQ1 711 aa7.71□□□□□ -1.18
CUL3-212ENST00000497715 NEUROD1Q13562 356 aa7.7□□□□□ -1.18
CUL3-212ENST00000497715 SAMD1Q6SPF0 538 aaPredicted RBP7.69□□□□□ -1.18
CUL3-212ENST00000497715 TAF7LQ5H9L4 462 aa7.64□□□□□ -1.19
CUL3-212ENST00000497715 RNF39Q9H2S5 420 aa7.64□□□□□ -1.19
CUL3-212ENST00000497715 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.64□□□□□ -1.19
CUL3-212ENST00000497715 PAXIP1Q6ZW49 1069 aaPredicted RBP7.62□□□□□ -1.19
CUL3-212ENST00000497715 TRIM26Q12899 539 aaPredicted RBP7.6□□□□□ -1.19
CUL3-212ENST00000497715 SP7Q8TDD2 431 aaPredicted RBP7.59□□□□□ -1.19
CUL3-212ENST00000497715 IRX6P78412 446 aaPredicted RBP7.59□□□□□ -1.19
CUL3-212ENST00000497715 AAMPQ13685 434 aa7.59□□□□□ -1.19
CUL3-212ENST00000497715 C1QBPQ07021 282 aaKnown RBP7.58□□□□□ -1.2
CUL3-212ENST00000497715 BRD2P25440 801 aaKnown RBP7.55□□□□□ -1.2
CUL3-212ENST00000497715 ZEB1P37275 1124 aaPredicted RBP7.55□□□□□ -1.2
CUL3-212ENST00000497715 RBM10P98175 930 aaKnown RBP7.55□□□□□ -1.2
CUL3-212ENST00000497715 DEKP35659 375 aaKnown RBP7.54□□□□□ -1.2
CUL3-212ENST00000497715 ZMYND15Q9H091 742 aa7.49□□□□□ -1.21
CUL3-212ENST00000497715 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.49□□□□□ -1.21
CUL3-212ENST00000497715 SUPT5HO00267 1087 aaKnown RBP7.46□□□□□ -1.22
CUL3-212ENST00000497715 CFAP44Q96MT7 982 aa7.46□□□□□ -1.22
CUL3-212ENST00000497715 RSPH6AQ9H0K4 717 aa7.46□□□□□ -1.22
CUL3-212ENST00000497715 DCAF8L1A6NGE4 600 aa7.46□□□□□ -1.22
CUL3-212ENST00000497715 UBTFP17480 764 aaKnown RBP7.46□□□□□ -1.22
CUL3-212ENST00000497715 CNKSR2Q8WXI2 1034 aa7.46□□□□□ -1.22
CUL3-212ENST00000497715 HOXD11P31277 338 aaPredicted RBP7.45□□□□□ -1.22
CUL3-212ENST00000497715 BCANQ96GW7 911 aa7.44□□□□□ -1.22
CUL3-212ENST00000497715 IGSF3O75054 1194 aa7.43□□□□□ -1.22
CUL3-212ENST00000497715 RSPH4AQ5TD94 716 aa7.43□□□□□ -1.22
CUL3-212ENST00000497715 ERICH6BQ5W0A0 696 aa7.43□□□□□ -1.22
CUL3-212ENST00000497715 PCGF6Q9BYE7 350 aa7.43□□□□□ -1.22
CUL3-212ENST00000497715 CLSPNQ9HAW4 1339 aa7.41□□□□□ -1.22
CUL3-212ENST00000497715 TMEM132AQ24JP5 1023 aa7.4□□□□□ -1.22
CUL3-212ENST00000497715 CDK11BP21127 795 aaKnown RBP7.39□□□□□ -1.23
CUL3-212ENST00000497715 VSIG10Q8N0Z9 540 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms