RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 LYSTQ99698 3801 aa7.85□□□□□ -1.15
GAPVD1-220ENST00000497580 PLA2G1BP04054 148 aaKnown RBP7.84□□□□□ -1.15
GAPVD1-220ENST00000497580 MIR22HGQ0VDD5 57 aa7.83□□□□□ -1.16
GAPVD1-220ENST00000497580 TGP01266 2768 aa7.82□□□□□ -1.16
GAPVD1-220ENST00000497580 DNAH10Q8IVF4 4471 aa7.81□□□□□ -1.16
GAPVD1-220ENST00000497580 ASB16-AS1Q495Z4 193 aa7.81□□□□□ -1.16
GAPVD1-220ENST00000497580 PANO1I0J062 215 aa7.79□□□□□ -1.16
GAPVD1-220ENST00000497580 UQCR11O14957 56 aa7.77□□□□□ -1.17
GAPVD1-220ENST00000497580 RTL8CO15255 209 aa7.76□□□□□ -1.17
GAPVD1-220ENST00000497580 SPINK1P00995 79 aa7.74□□□□□ -1.17
GAPVD1-220ENST00000497580 SPATA8Q6RVD6 105 aa7.74□□□□□ -1.17
GAPVD1-220ENST00000497580 CIRBP-AS1Q8TBR5 109 aa7.74□□□□□ -1.17
GAPVD1-220ENST00000497580 FLG2Q5D862 2391 aaPredicted RBP7.71□□□□□ -1.17
GAPVD1-220ENST00000497580 DMAC1Q96GE9 116 aa7.69□□□□□ -1.18
GAPVD1-220ENST00000497580 C14orf177Q52M58 125 aa7.69□□□□□ -1.18
GAPVD1-220ENST00000497580 IGKV2D-30A0A075B6S6 120 aa7.69□□□□□ -1.18
GAPVD1-220ENST00000497580 IGKV2-30P06310 120 aa7.69□□□□□ -1.18
GAPVD1-220ENST00000497580 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.68□□□□□ -1.18
GAPVD1-220ENST00000497580 WWC2-AS2Q96NR7 200 aa7.67□□□□□ -1.18
GAPVD1-220ENST00000497580 KRTAP13-1Q8IUC0 172 aa7.67□□□□□ -1.18
GAPVD1-220ENST00000497580 CMYA5Q8N3K9 4069 aa7.66□□□□□ -1.18
GAPVD1-220ENST00000497580 C1orf134Q5TEV5 83 aa7.65□□□□□ -1.18
GAPVD1-220ENST00000497580 FBN3Q75N90 2809 aa7.65□□□□□ -1.19
GAPVD1-220ENST00000497580 ZNF706Q9Y5V0 76 aaPredicted RBP7.64□□□□□ -1.19
GAPVD1-220ENST00000497580 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
GAPVD1-220ENST00000497580 PSORS1C2Q9UIG4 136 aa7.62□□□□□ -1.19
GAPVD1-220ENST00000497580 FAM229AH3BQW9 127 aa7.59□□□□□ -1.19
GAPVD1-220ENST00000497580 ZNF861PO60384 105 aa7.58□□□□□ -1.2
GAPVD1-220ENST00000497580 DNAH1Q9P2D7 4330 aa7.58□□□□□ -1.2
GAPVD1-220ENST00000497580 LINC00483Q53H64 154 aa7.58□□□□□ -1.2
GAPVD1-220ENST00000497580 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
GAPVD1-220ENST00000497580 NBDYA0A0U1RRE5 68 aa7.57□□□□□ -1.2
GAPVD1-220ENST00000497580 DNAH3Q8TD57 4116 aa7.55□□□□□ -1.2
GAPVD1-220ENST00000497580 HUWE1Q7Z6Z7 4374 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-220ENST00000497580 APLNQ9ULZ1 77 aa7.55□□□□□ -1.2
GAPVD1-220ENST00000497580 Q8N1X5 172 aa7.54□□□□□ -1.2
GAPVD1-220ENST00000497580 SPACA4Q8TDM5 124 aa7.53□□□□□ -1.2
GAPVD1-220ENST00000497580 DNAH9Q9NYC9 4486 aa7.53□□□□□ -1.2
GAPVD1-220ENST00000497580 MEGF8Q7Z7M0 2845 aa7.53□□□□□ -1.2
GAPVD1-220ENST00000497580 IGLV5-52A0A0A0MRZ9 124 aa7.51□□□□□ -1.21
GAPVD1-220ENST00000497580 DNAH7Q8WXX0 4024 aa7.51□□□□□ -1.21
GAPVD1-220ENST00000497580 IGLV7-43P04211 117 aa7.5□□□□□ -1.21
GAPVD1-220ENST00000497580 ALMS1Q8TCU4 4167 aa7.5□□□□□ -1.21
GAPVD1-220ENST00000497580 FRAS1Q86XX4 4008 aa7.46□□□□□ -1.22
GAPVD1-220ENST00000497580 LY6G6CO95867 125 aa7.45□□□□□ -1.22
GAPVD1-220ENST00000497580 A0A087WTM6 91 aa7.45□□□□□ -1.22
GAPVD1-220ENST00000497580 ROMO1P60602 79 aa7.44□□□□□ -1.22
GAPVD1-220ENST00000497580 KRTAP25-1Q3LHN0 102 aa7.44□□□□□ -1.22
GAPVD1-220ENST00000497580 DMBT1Q9UGM3 2413 aaPredicted RBP7.43□□□□□ -1.22
GAPVD1-220ENST00000497580 PLECQ15149 4684 aaKnown RBP7.4□□□□□ -1.22
GAPVD1-220ENST00000497580 SSBP3-AS1Q7Z2R9 100 aa7.4□□□□□ -1.23
GAPVD1-220ENST00000497580 LINC00304Q8N9R0 145 aa7.4□□□□□ -1.23
GAPVD1-220ENST00000497580 H0YAA0 97 aa7.39□□□□□ -1.23
GAPVD1-220ENST00000497580 NUPR2A6NF83 97 aa7.39□□□□□ -1.23
GAPVD1-220ENST00000497580 Q6ZRN7 208 aaPredicted RBP7.38□□□□□ -1.23
GAPVD1-220ENST00000497580 Q6ZSA8 131 aa7.38□□□□□ -1.23
GAPVD1-220ENST00000497580 DNAH8Q96JB1 4490 aa7.37□□□□□ -1.23
GAPVD1-220ENST00000497580 A8MUU9 505 aa7.37□□□□□ -1.23
GAPVD1-220ENST00000497580 KRTAP21-3Q3LHN1 58 aa7.37□□□□□ -1.23
GAPVD1-220ENST00000497580 TYMSOSQ8TAI1 123 aa7.36□□□□□ -1.23
GAPVD1-220ENST00000497580 A0A1B0GU33 70 aa7.32□□□□□ -1.24
GAPVD1-220ENST00000497580 DNHD1Q96M86 4753 aa7.32□□□□□ -1.24
GAPVD1-220ENST00000497580 KMT2AQ03164 3969 aa7.31□□□□□ -1.24
GAPVD1-220ENST00000497580 KRTAP16-1A8MUX0 517 aa7.3□□□□□ -1.24
GAPVD1-220ENST00000497580 K7ERS5 55 aa7.27□□□□□ -1.25
GAPVD1-220ENST00000497580 SPINT4Q6UDR6 99 aa7.27□□□□□ -1.25
GAPVD1-220ENST00000497580 KRTAP13-2Q52LG2 175 aa7.26□□□□□ -1.25
GAPVD1-220ENST00000497580 DNAH17Q9UFH2 4485 aa7.26□□□□□ -1.25
GAPVD1-220ENST00000497580 P0C880 135 aa7.25□□□□□ -1.25
GAPVD1-220ENST00000497580 STARD9Q9P2P6 4700 aa7.25□□□□□ -1.25
GAPVD1-220ENST00000497580 KRTAP10-2P60368 255 aa7.25□□□□□ -1.25
GAPVD1-220ENST00000497580 H1FX-AS1Q4G0G2 97 aa7.23□□□□□ -1.25
GAPVD1-220ENST00000497580 PRKDCP78527 4128 aaKnown RBP7.17□□□□□ -1.26
GAPVD1-220ENST00000497580 A0A0D9SG42 100 aa7.16□□□□□ -1.26
GAPVD1-220ENST00000497580 C9orf92A6NGG3 77 aa7.16□□□□□ -1.26
GAPVD1-220ENST00000497580 DNAH6Q9C0G6 4158 aa7.15□□□□□ -1.27
GAPVD1-220ENST00000497580 SMR3BP02814 79 aaPredicted RBP7.14□□□□□ -1.27
GAPVD1-220ENST00000497580 DNAH11Q96DT5 4516 aa7.14□□□□□ -1.27
GAPVD1-220ENST00000497580 HECTD4Q9Y4D8 3996 aa7.12□□□□□ -1.27
GAPVD1-220ENST00000497580 NDUFAF8A1L188 74 aa7.11□□□□□ -1.27
GAPVD1-220ENST00000497580 DYNC2H1Q8NCM8 4307 aaKnown RBP7.11□□□□□ -1.27
GAPVD1-220ENST00000497580 KRTAP10-1P60331 282 aa7.11□□□□□ -1.27
GAPVD1-220ENST00000497580 COX6B2Q6YFQ2 88 aa7.1□□□□□ -1.27
GAPVD1-220ENST00000497580 C10orf95Q9H7T3 257 aa7.09□□□□□ -1.27
GAPVD1-220ENST00000497580 DNAH2Q9P225 4427 aa7.09□□□□□ -1.28
GAPVD1-220ENST00000497580 VPS13DQ5THJ4 4388 aa7.07□□□□□ -1.28
GAPVD1-220ENST00000497580 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
GAPVD1-220ENST00000497580 LRP1BQ9NZR2 4599 aa7.02□□□□□ -1.29
GAPVD1-220ENST00000497580 TPRXLQ17RH7 258 aa7.01□□□□□ -1.29
GAPVD1-220ENST00000497580 KRTAP1-4P0C5Y4 121 aa7.01□□□□□ -1.29
GAPVD1-220ENST00000497580 RPL37P61927 97 aaKnown RBP6.99□□□□□ -1.29
GAPVD1-220ENST00000497580 C20orf166-AS1Q96NR2 134 aa6.96□□□□□ -1.3
GAPVD1-220ENST00000497580 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.3
GAPVD1-220ENST00000497580 VPS13BQ7Z7G8 4022 aa6.9□□□□□ -1.31
GAPVD1-220ENST00000497580 DNAH5Q8TE73 4624 aa6.87□□□□□ -1.31
GAPVD1-220ENST00000497580 HYDINQ4G0P3 5121 aa6.83□□□□□ -1.32
GAPVD1-220ENST00000497580 FAT2Q9NYQ8 4349 aa6.83□□□□□ -1.32
GAPVD1-220ENST00000497580 KRTAP15-1Q3LI76 137 aa6.83□□□□□ -1.32
GAPVD1-220ENST00000497580 FAT1Q14517 4588 aa6.82□□□□□ -1.32
GAPVD1-220ENST00000497580 PKHD1P08F94 4074 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms