RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 KRTAP10-4P60372 401 aaPredicted RBP2.79□□□□□ -1.96
CMSS1-209ENST00000497345 Q6ZVQ6 151 aa2.79□□□□□ -1.96
CMSS1-209ENST00000497345 TYMSOSQ8TAI1 123 aa2.79□□□□□ -1.96
CMSS1-209ENST00000497345 SIGMAR1Q99720 223 aa2.79□□□□□ -1.96
CMSS1-209ENST00000497345 UBL5Q9BZL1 73 aa2.79□□□□□ -1.96
CMSS1-209ENST00000497345 APOBP04114 4563 aaKnown RBP2.78□□□□□ -1.96
CMSS1-209ENST00000497345 IGLV8-61A0A075B6I0 122 aa2.78□□□□□ -1.96
CMSS1-209ENST00000497345 HIST1H4AP62805 103 aaKnown RBP2.78□□□□□ -1.96
CMSS1-209ENST00000497345 Q8N9L7 120 aa2.78□□□□□ -1.96
CMSS1-209ENST00000497345 KIAA1109Q2LD37 5005 aa2.78□□□□□ -1.97
CMSS1-209ENST00000497345 TRBV7-7A0A0K0K1E9 115 aa2.77□□□□□ -1.97
CMSS1-209ENST00000497345 FAM229BQ4G0N7 80 aa2.77□□□□□ -1.97
CMSS1-209ENST00000497345 LINC00643Q86TS7 51 aa2.77□□□□□ -1.97
CMSS1-209ENST00000497345 RYR1P21817 5038 aa2.76□□□□□ -1.97
CMSS1-209ENST00000497345 BPY2O14599 106 aa2.76□□□□□ -1.97
CMSS1-209ENST00000497345 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
CMSS1-209ENST00000497345 SSBP3-AS1Q7Z2R9 100 aa2.76□□□□□ -1.97
CMSS1-209ENST00000497345 FAT1Q14517 4588 aa2.75□□□□□ -1.97
CMSS1-209ENST00000497345 PKHD1P08F94 4074 aa2.75□□□□□ -1.97
CMSS1-209ENST00000497345 A0A087WVE0 104 aa2.75□□□□□ -1.97
CMSS1-209ENST00000497345 LINC00304Q8N9R0 145 aa2.75□□□□□ -1.97
CMSS1-209ENST00000497345 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
CMSS1-209ENST00000497345 IGKV4-1P06312 121 aa2.74□□□□□ -1.97
CMSS1-209ENST00000497345 Q6Q795 121 aa2.73□□□□□ -1.97
CMSS1-209ENST00000497345 RETNLBQ9BQ08 111 aa2.73□□□□□ -1.97
CMSS1-209ENST00000497345 SS18L2Q9UHA2 77 aa2.73□□□□□ -1.97
CMSS1-209ENST00000497345 FLG2Q5D862 2391 aaPredicted RBP2.72□□□□□ -1.97
CMSS1-209ENST00000497345 IGHV6-1A0A0B4J1U7 121 aa2.72□□□□□ -1.97
CMSS1-209ENST00000497345 FAM236AA0A1B0GUQ0 79 aa2.72□□□□□ -1.97
CMSS1-209ENST00000497345 FAM236BA0A1B0GV22 79 aa2.72□□□□□ -1.97
CMSS1-209ENST00000497345 K7EQZ3 153 aa2.72□□□□□ -1.97
CMSS1-209ENST00000497345 DSCR10P59022 87 aa2.72□□□□□ -1.97
CMSS1-209ENST00000497345 ATP5EP2Q5VTU8 51 aa2.72□□□□□ -1.97
CMSS1-209ENST00000497345 WFDC13Q8IUB5 93 aa2.72□□□□□ -1.97
CMSS1-209ENST00000497345 LINC00472Q9H8W2 130 aa2.72□□□□□ -1.97
CMSS1-209ENST00000497345 A0A1B0GW54 56 aa2.71□□□□□ -1.98
CMSS1-209ENST00000497345 CXCL6P80162 114 aa2.71□□□□□ -1.98
CMSS1-209ENST00000497345 CD164Q04900 197 aa2.71□□□□□ -1.98
CMSS1-209ENST00000497345 Q96NJ1 140 aa2.71□□□□□ -1.98
CMSS1-209ENST00000497345 LIMD2Q9BT23 127 aa2.71□□□□□ -1.98
CMSS1-209ENST00000497345 NDUFB1O75438 58 aa2.7□□□□□ -1.98
CMSS1-209ENST00000497345 SPINK1P00995 79 aa2.7□□□□□ -1.98
CMSS1-209ENST00000497345 SCGB1A1P11684 91 aa2.7□□□□□ -1.98
CMSS1-209ENST00000497345 KRTAP5-9P26371 169 aa2.7□□□□□ -1.98
CMSS1-209ENST00000497345 C1orf195Q5TG92 126 aa2.7□□□□□ -1.98
CMSS1-209ENST00000497345 BIRC6Q9NR09 4857 aa2.7□□□□□ -1.98
CMSS1-209ENST00000497345 HSPG2P98160 4391 aa2.7□□□□□ -1.98
CMSS1-209ENST00000497345 A8MWP4 228 aa2.69□□□□□ -1.98
CMSS1-209ENST00000497345 J3KT08 172 aa2.69□□□□□ -1.98
CMSS1-209ENST00000497345 KRTAP10-8P60410 259 aa2.69□□□□□ -1.98
CMSS1-209ENST00000497345 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
CMSS1-209ENST00000497345 SPAG11AQ6PDA7 123 aa2.69□□□□□ -1.98
CMSS1-209ENST00000497345 NOTCH2NLQ7Z3S9 236 aa2.69□□□□□ -1.98
CMSS1-209ENST00000497345 VPS13BQ7Z7G8 4022 aa2.68□□□□□ -1.98
CMSS1-209ENST00000497345 A0A1B0GVX0 72 aa2.68□□□□□ -1.98
CMSS1-209ENST00000497345 C9orf92A6NGG3 77 aa2.68□□□□□ -1.98
CMSS1-209ENST00000497345 NDUFS5O43920 106 aa2.68□□□□□ -1.98
CMSS1-209ENST00000497345 PRR15Q8IV56 129 aa2.68□□□□□ -1.98
CMSS1-209ENST00000497345 SVIPQ8NHG7 77 aa2.68□□□□□ -1.98
CMSS1-209ENST00000497345 ANAPC13Q9BS18 74 aa2.68□□□□□ -1.98
CMSS1-209ENST00000497345 IMUPQ9GZP8 106 aa2.68□□□□□ -1.98
CMSS1-209ENST00000497345 HCG22E2RYF7 251 aa2.67□□□□□ -1.98
CMSS1-209ENST00000497345 MT1HL1P0DM35 61 aa2.67□□□□□ -1.98
CMSS1-209ENST00000497345 CASC2Q6XLA1 102 aa2.67□□□□□ -1.98
CMSS1-209ENST00000497345 C8orf17Q9NRJ1 99 aa2.67□□□□□ -1.98
CMSS1-209ENST00000497345 MMP24-AS1A0A0U1RRL7 71 aa2.66□□□□□ -1.98
CMSS1-209ENST00000497345 PRR4Q16378 134 aa2.66□□□□□ -1.98
CMSS1-209ENST00000497345 PKHD1L1Q86WI1 4243 aa2.66□□□□□ -1.98
CMSS1-209ENST00000497345 ABCA13Q86UQ4 5058 aa2.66□□□□□ -1.98
CMSS1-209ENST00000497345 LRP1Q07954 4544 aaKnown RBP2.65□□□□□ -1.98
CMSS1-209ENST00000497345 hDV103S1A0JD37 113 aa2.65□□□□□ -1.99
CMSS1-209ENST00000497345 ATOX1O00244 68 aa2.65□□□□□ -1.99
CMSS1-209ENST00000497345 OXTP01178 125 aa2.65□□□□□ -1.99
CMSS1-209ENST00000497345 LINC00313P59037 77 aa2.65□□□□□ -1.99
CMSS1-209ENST00000497345 ASB16-AS1Q495Z4 193 aa2.65□□□□□ -1.99
CMSS1-209ENST00000497345 Q5XG85 94 aa2.65□□□□□ -1.99
CMSS1-209ENST00000497345 SEC61BP60468 96 aaKnown RBP2.64□□□□□ -1.99
CMSS1-209ENST00000497345 HERC2O95714 4834 aa2.64□□□□□ -1.99
CMSS1-209ENST00000497345 DMBT1Q9UGM3 2413 aaPredicted RBP2.63□□□□□ -1.99
CMSS1-209ENST00000497345 IGLV7-46A0A075B6I9 117 aa2.63□□□□□ -1.99
CMSS1-209ENST00000497345 C8orf87E5RJ46 101 aa2.63□□□□□ -1.99
CMSS1-209ENST00000497345 CCDC179H3BU77 68 aa2.63□□□□□ -1.99
CMSS1-209ENST00000497345 RPS29P62273 56 aaKnown RBP2.63□□□□□ -1.99
CMSS1-209ENST00000497345 FAT3Q8TDW7 4589 aa2.63□□□□□ -1.99
CMSS1-209ENST00000497345 TMEM254Q8TBM7 123 aa2.62□□□□□ -1.99
CMSS1-209ENST00000497345 MRPL34Q9BQ48 92 aaKnown RBP2.62□□□□□ -1.99
CMSS1-209ENST00000497345 SNURFQ9Y675 71 aa2.62□□□□□ -1.99
CMSS1-209ENST00000497345 TRAV7A0A075B6U4 112 aa2.61□□□□□ -1.99
CMSS1-209ENST00000497345 C20orf197Q8N268 126 aa2.61□□□□□ -1.99
CMSS1-209ENST00000497345 SERP2Q8N6R1 65 aa2.61□□□□□ -1.99
CMSS1-209ENST00000497345 H0Y9P7 68 aa2.6□□□□□ -1.99
CMSS1-209ENST00000497345 COX7CP15954 63 aa2.6□□□□□ -1.99
CMSS1-209ENST00000497345 OCR1Q9BZK8 76 aa2.6□□□□□ -1.99
CMSS1-209ENST00000497345 KRTAP16-1A8MUX0 517 aa2.59□□□□□ -1.99
CMSS1-209ENST00000497345 UQCRQO14949 82 aa2.59□□□□□ -1.99
CMSS1-209ENST00000497345 Q5W150 140 aa2.59□□□□□ -1.99
CMSS1-209ENST00000497345 SMIM20Q8N5G0 67 aa2.59□□□□□ -1.99
CMSS1-209ENST00000497345 LINC00208Q96KT6 92 aa2.59□□□□□ -1.99
CMSS1-209ENST00000497345 MYCBP2O75592 4640 aa2.58□□□□□ -2
CMSS1-209ENST00000497345 MP68P56378 58 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms