RNA–Protein interactions for RNA: ENST00000496384.6

BRAF-204, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 8,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-204ENST00000496384 COL6A3P12111 3177 aa2.53□□□□□ -2
BRAF-204ENST00000496384 F8P00451 2351 aa2.53□□□□□ -2
BRAF-204ENST00000496384 UTP20O75691 2785 aaKnown RBP2.52□□□□□ -2.01
BRAF-204ENST00000496384 MGAQ8IWI9 3026 aa2.52□□□□□ -2.01
BRAF-204ENST00000496384 DMXL1Q9Y485 3027 aa2.52□□□□□ -2.01
BRAF-204ENST00000496384 KRTAP10-2P60368 255 aa2.52□□□□□ -2.01
BRAF-204ENST00000496384 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
BRAF-204ENST00000496384 NBASA2RRP1 2371 aa2.51□□□□□ -2.01
BRAF-204ENST00000496384 FLNCQ14315 2725 aa2.51□□□□□ -2.01
BRAF-204ENST00000496384 KRTAP10-1P60331 282 aa2.51□□□□□ -2.01
BRAF-204ENST00000496384 NOTCH3Q9UM47 2321 aa2.51□□□□□ -2.01
BRAF-204ENST00000496384 VWFP04275 2813 aa2.51□□□□□ -2.01
BRAF-204ENST00000496384 KMT2BQ9UMN6 2715 aaPredicted RBP2.51□□□□□ -2.01
BRAF-204ENST00000496384 WDFY4Q6ZS81 3184 aa2.51□□□□□ -2.01
BRAF-204ENST00000496384 DNAH14Q0VDD8 3507 aa2.51□□□□□ -2.01
BRAF-204ENST00000496384 ANKRD17O75179 2603 aaKnown RBP2.5□□□□□ -2.01
BRAF-204ENST00000496384 WDFY3Q8IZQ1 3526 aa2.5□□□□□ -2.01
BRAF-204ENST00000496384 NUPR2A6NF83 97 aa2.5□□□□□ -2.01
BRAF-204ENST00000496384 USP24Q9UPU5 2620 aa2.49□□□□□ -2.01
BRAF-204ENST00000496384 FAT4Q6V0I7 4981 aa2.49□□□□□ -2.01
BRAF-204ENST00000496384 K7ERS5 55 aa2.49□□□□□ -2.01
BRAF-204ENST00000496384 SPINK1P00995 79 aa2.49□□□□□ -2.01
BRAF-204ENST00000496384 ALMS1Q8TCU4 4167 aa2.49□□□□□ -2.01
BRAF-204ENST00000496384 ANK2Q01484 3957 aa2.49□□□□□ -2.01
BRAF-204ENST00000496384 KRTAP10-8P60410 259 aa2.49□□□□□ -2.01
BRAF-204ENST00000496384 DMXL2Q8TDJ6 3036 aa2.48□□□□□ -2.01
BRAF-204ENST00000496384 NF1P21359 2839 aa2.48□□□□□ -2.01
BRAF-204ENST00000496384 Q8N1X5 172 aa2.48□□□□□ -2.01
BRAF-204ENST00000496384 PKHD1L1Q86WI1 4243 aa2.48□□□□□ -2.01
BRAF-204ENST00000496384 SPG11Q96JI7 2443 aa2.48□□□□□ -2.01
BRAF-204ENST00000496384 FLNBO75369 2602 aaKnown RBP2.47□□□□□ -2.01
BRAF-204ENST00000496384 MYO18BQ8IUG5 2567 aa2.47□□□□□ -2.01
BRAF-204ENST00000496384 J3QL48 77 aa2.47□□□□□ -2.01
BRAF-204ENST00000496384 RPL37P61927 97 aaKnown RBP2.47□□□□□ -2.01
BRAF-204ENST00000496384 SPINK6Q6UWN8 80 aa2.47□□□□□ -2.01
BRAF-204ENST00000496384 KRTAP17-1Q9BYP8 105 aa2.47□□□□□ -2.01
BRAF-204ENST00000496384 TENM3Q9P273 2699 aa2.47□□□□□ -2.01
BRAF-204ENST00000496384 SMG1Q96Q15 3661 aaKnown RBP2.47□□□□□ -2.01
BRAF-204ENST00000496384 KRTAP12-1P59990 96 aa2.47□□□□□ -2.01
BRAF-204ENST00000496384 NSD1Q96L73 2696 aaPredicted RBP2.47□□□□□ -2.01
BRAF-204ENST00000496384 CDK2AP2O75956 126 aa2.47□□□□□ -2.01
BRAF-204ENST00000496384 TENM4Q6N022 2769 aa2.46□□□□□ -2.02
BRAF-204ENST00000496384 CSPG4Q6UVK1 2322 aa2.46□□□□□ -2.02
BRAF-204ENST00000496384 TENM1Q9UKZ4 2725 aa2.46□□□□□ -2.02
BRAF-204ENST00000496384 APCP25054 2843 aa2.46□□□□□ -2.02
BRAF-204ENST00000496384 A0A1B0GVY2 172 aa2.46□□□□□ -2.02
BRAF-204ENST00000496384 KRTAP19-2Q3LHN2 52 aa2.46□□□□□ -2.02
BRAF-204ENST00000496384 CHD8Q9HCK8 2581 aa2.46□□□□□ -2.02
BRAF-204ENST00000496384 BSNQ9UPA5 3926 aa2.45□□□□□ -2.02
BRAF-204ENST00000496384 ROS1P08922 2347 aa2.45□□□□□ -2.02
BRAF-204ENST00000496384 ZFHX4Q86UP3 3567 aa2.45□□□□□ -2.02
BRAF-204ENST00000496384 FN1P02751 2386 aaKnown RBP2.44□□□□□ -2.02
BRAF-204ENST00000496384 LRRK2Q5S007 2527 aa2.44□□□□□ -2.02
BRAF-204ENST00000496384 HIVEP2P31629 2446 aa2.44□□□□□ -2.02
BRAF-204ENST00000496384 MAST4O15021 2626 aa2.44□□□□□ -2.02
BRAF-204ENST00000496384 KRTAP12-2P59991 146 aa2.43□□□□□ -2.02
BRAF-204ENST00000496384 PTPN13Q12923 2485 aa2.43□□□□□ -2.02
BRAF-204ENST00000496384 SPTBN4Q9H254 2564 aa2.43□□□□□ -2.02
BRAF-204ENST00000496384 CCDC168Q8NDH2 2452 aa2.43□□□□□ -2.02
BRAF-204ENST00000496384 MEGF8Q7Z7M0 2845 aa2.42□□□□□ -2.02
BRAF-204ENST00000496384 MUC17Q685J3 4493 aa2.42□□□□□ -2.02
BRAF-204ENST00000496384 LOC400499M0QZD8 3231 aa2.41□□□□□ -2.02
BRAF-204ENST00000496384 NBPF19A0A087WUL8 3843 aa2.41□□□□□ -2.02
BRAF-204ENST00000496384 SONP18583 2426 aaKnown RBP2.41□□□□□ -2.02
BRAF-204ENST00000496384 CUBNO60494 3623 aa2.41□□□□□ -2.02
BRAF-204ENST00000496384 MYO9AB2RTY4 2548 aa2.41□□□□□ -2.02
BRAF-204ENST00000496384 UBE2DNLQ8IWF7 75 aa2.41□□□□□ -2.02
BRAF-204ENST00000496384 C10orf95Q9H7T3 257 aa2.4□□□□□ -2.02
BRAF-204ENST00000496384 ABCA12Q86UK0 2595 aa2.4□□□□□ -2.03
BRAF-204ENST00000496384 FBN3Q75N90 2809 aa2.4□□□□□ -2.03
BRAF-204ENST00000496384 PKD1P98161 4303 aa2.39□□□□□ -2.03
BRAF-204ENST00000496384 CELSR2Q9HCU4 2923 aa2.39□□□□□ -2.03
BRAF-204ENST00000496384 C2CD3Q4AC94 2353 aa2.39□□□□□ -2.03
BRAF-204ENST00000496384 CRIPTQ9P021 101 aa2.39□□□□□ -2.03
BRAF-204ENST00000496384 TACC2O95359 2948 aa2.38□□□□□ -2.03
BRAF-204ENST00000496384 PLAC4Q8WY50 150 aa2.38□□□□□ -2.03
BRAF-204ENST00000496384 DNAH6Q9C0G6 4158 aa2.37□□□□□ -2.03
BRAF-204ENST00000496384 MYO15AQ9UKN7 3530 aa2.36□□□□□ -2.03
BRAF-204ENST00000496384 NBEAL2Q6ZNJ1 2754 aa2.36□□□□□ -2.03
BRAF-204ENST00000496384 DMDP11532 3685 aa2.36□□□□□ -2.03
BRAF-204ENST00000496384 FBN1P35555 2871 aaKnown RBP2.36□□□□□ -2.03
BRAF-204ENST00000496384 A0A0A0MQY5 61 aa2.36□□□□□ -2.03
BRAF-204ENST00000496384 SEC61BP60468 96 aaKnown RBP2.36□□□□□ -2.03
BRAF-204ENST00000496384 ASH1LQ9NR48 2969 aaKnown RBP2.36□□□□□ -2.03
BRAF-204ENST00000496384 S4R3F8 94 aa2.36□□□□□ -2.03
BRAF-204ENST00000496384 ZFYVE26Q68DK2 2539 aa2.35□□□□□ -2.03
BRAF-204ENST00000496384 KRTAP23-1A1A580 65 aa2.35□□□□□ -2.03
BRAF-204ENST00000496384 NDUFAF8A1L188 74 aa2.35□□□□□ -2.03
BRAF-204ENST00000496384 MT1HL1P0DM35 61 aa2.34□□□□□ -2.03
BRAF-204ENST00000496384 CENPEQ02224 2701 aa2.34□□□□□ -2.04
BRAF-204ENST00000496384 JMJD1CQ15652 2540 aa2.33□□□□□ -2.04
BRAF-204ENST00000496384 TLN2Q9Y4G6 2542 aa2.33□□□□□ -2.04
BRAF-204ENST00000496384 PKHD1P08F94 4074 aa2.32□□□□□ -2.04
BRAF-204ENST00000496384 M0QZ58 72 aa2.32□□□□□ -2.04
BRAF-204ENST00000496384 COL12A1Q99715 3063 aa2.32□□□□□ -2.04
BRAF-204ENST00000496384 GCN1Q92616 2671 aaKnown RBP2.32□□□□□ -2.04
BRAF-204ENST00000496384 PRKDCP78527 4128 aaKnown RBP2.31□□□□□ -2.04
BRAF-204ENST00000496384 STAB2Q8WWQ8 2551 aa2.31□□□□□ -2.04
BRAF-204ENST00000496384 ACANP16112 2415 aa2.31□□□□□ -2.04
BRAF-204ENST00000496384 USH2AO75445 5202 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms