RNA–Protein interactions for RNA: ENST00000496384.6

BRAF-204, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 8,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-204ENST00000496384 NISCHQ9Y2I1 1504 aa10.1□□□□□ -0.79
BRAF-204ENST00000496384 HRCP23327 699 aa8.82□□□□□ -1
BRAF-204ENST00000496384 ZCCHC6Q5VYS8 1495 aaKnown RBP8.75□□□□□ -1.01
BRAF-204ENST00000496384 MYO15BQ96JP2 1530 aa8.65□□□□□ -1.02
BRAF-204ENST00000496384 DCAF1Q9Y4B6 1507 aa8.65□□□□□ -1.03
BRAF-204ENST00000496384 CHIC1Q5VXU3 224 aa8.63□□□□□ -1.03
BRAF-204ENST00000496384 PELP1Q8IZL8 1130 aaKnown RBP8.35□□□□□ -1.07
BRAF-204ENST00000496384 PPARGC1BQ86YN6 1023 aaKnown RBP8.31□□□□□ -1.08
BRAF-204ENST00000496384 CCDC180Q9P1Z9 1646 aa8.27□□□□□ -1.08
BRAF-204ENST00000496384 SCAF1Q9H7N4 1312 aaKnown RBP8.22□□□□□ -1.09
BRAF-204ENST00000496384 TRIM26Q12899 539 aaPredicted RBP8.19□□□□□ -1.1
BRAF-204ENST00000496384 RSF1Q96T23 1441 aaPredicted RBP8.19□□□□□ -1.1
BRAF-204ENST00000496384 SHROOM4Q9ULL8 1493 aa8.17□□□□□ -1.1
BRAF-204ENST00000496384 SUPT5HO00267 1087 aaKnown RBP8.16□□□□□ -1.1
BRAF-204ENST00000496384 WRNQ14191 1432 aaPredicted RBP eCLIP8.15□□□□□ -1.1
BRAF-204ENST00000496384 PCGF6Q9BYE7 350 aa8.15□□□□□ -1.1
BRAF-204ENST00000496384 ABCC9O60706 1549 aa8.14□□□□□ -1.11
BRAF-204ENST00000496384 ZEB1P37275 1124 aaPredicted RBP8.14□□□□□ -1.11
BRAF-204ENST00000496384 EIF4G1Q04637 1599 aaKnown RBP8.09□□□□□ -1.11
BRAF-204ENST00000496384 ACIN1Q9UKV3 1341 aaKnown RBP8.03□□□□□ -1.12
BRAF-204ENST00000496384 LOC105371045A0A1W2PR82 267 aa8.02□□□□□ -1.13
BRAF-204ENST00000496384 TRIM41Q8WV44 630 aa8.01□□□□□ -1.13
BRAF-204ENST00000496384 MYT1Q01538 1121 aa7.98□□□□□ -1.13
BRAF-204ENST00000496384 NEUROD1Q13562 356 aa7.96□□□□□ -1.13
BRAF-204ENST00000496384 RB1CC1Q8TDY2 1594 aa7.95□□□□□ -1.14
BRAF-204ENST00000496384 TNIKQ9UKE5 1360 aa7.87□□□□□ -1.15
BRAF-204ENST00000496384 CUX2O14529 1486 aa7.83□□□□□ -1.16
BRAF-204ENST00000496384 EEA1Q15075 1411 aa7.82□□□□□ -1.16
BRAF-204ENST00000496384 CECR2Q9BXF3 1484 aa7.82□□□□□ -1.16
BRAF-204ENST00000496384 MROH2BQ7Z745 1585 aa7.8□□□□□ -1.16
BRAF-204ENST00000496384 CEP162Q5TB80 1403 aa7.73□□□□□ -1.17
BRAF-204ENST00000496384 CLSPNQ9HAW4 1339 aa7.73□□□□□ -1.17
BRAF-204ENST00000496384 GTF3C3Q9Y5Q9 886 aa7.72□□□□□ -1.17
BRAF-204ENST00000496384 BAZ1AQ9NRL2 1556 aaPredicted RBP7.69□□□□□ -1.18
BRAF-204ENST00000496384 CCDC88BA6NC98 1476 aa7.68□□□□□ -1.18
BRAF-204ENST00000496384 ZNF316A6NFI3 1004 aaPredicted RBP7.67□□□□□ -1.18
BRAF-204ENST00000496384 TOP2AP11388 1531 aaKnown RBP7.66□□□□□ -1.18
BRAF-204ENST00000496384 TTBK1Q5TCY1 1321 aaPredicted RBP7.66□□□□□ -1.18
BRAF-204ENST00000496384 SOGA1O94964 1423 aa7.65□□□□□ -1.18
BRAF-204ENST00000496384 DHX57Q6P158 1386 aaKnown RBP7.65□□□□□ -1.18
BRAF-204ENST00000496384 DIEXFQ68CQ4 756 aaKnown RBP7.64□□□□□ -1.19
BRAF-204ENST00000496384 RRBP1Q9P2E9 1410 aaKnown RBP7.63□□□□□ -1.19
BRAF-204ENST00000496384 VPS8Q8N3P4 1428 aa7.63□□□□□ -1.19
BRAF-204ENST00000496384 TSHZ2Q9NRE2 1034 aa7.62□□□□□ -1.19
BRAF-204ENST00000496384 PEG3Q9GZU2 1588 aa7.61□□□□□ -1.19
BRAF-204ENST00000496384 BAZ1BQ9UIG0 1483 aaKnown RBP7.61□□□□□ -1.19
BRAF-204ENST00000496384 CENPBP07199 599 aaPredicted RBP7.61□□□□□ -1.19
BRAF-204ENST00000496384 NACADO15069 1562 aa7.61□□□□□ -1.19
BRAF-204ENST00000496384 CLIP1P30622 1438 aa7.61□□□□□ -1.19
BRAF-204ENST00000496384 PRXQ9BXM0 1461 aa7.6□□□□□ -1.19
BRAF-204ENST00000496384 SMARCA2P51531 1590 aa7.6□□□□□ -1.19
BRAF-204ENST00000496384 GOLGA3Q08378 1498 aa7.6□□□□□ -1.19
BRAF-204ENST00000496384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.59□□□□□ -1.19
BRAF-204ENST00000496384 MIER1Q8N108 512 aa7.58□□□□□ -1.2
BRAF-204ENST00000496384 CSRNP3Q8WYN3 585 aa7.58□□□□□ -1.2
BRAF-204ENST00000496384 RUSC2Q8N2Y8 1516 aa7.57□□□□□ -1.2
BRAF-204ENST00000496384 SUPT16HQ9Y5B9 1047 aaKnown RBP7.56□□□□□ -1.2
BRAF-204ENST00000496384 CEP164Q9UPV0 1460 aa7.55□□□□□ -1.2
BRAF-204ENST00000496384 KIF21BO75037 1637 aa7.54□□□□□ -1.2
BRAF-204ENST00000496384 ANP32EQ9BTT0 268 aa7.54□□□□□ -1.2
BRAF-204ENST00000496384 ABCC8Q09428 1581 aa7.51□□□□□ -1.21
BRAF-204ENST00000496384 MAP3K1Q13233 1512 aa7.51□□□□□ -1.21
BRAF-204ENST00000496384 FAM9AQ8IZU1 332 aaPredicted RBP7.5□□□□□ -1.21
BRAF-204ENST00000496384 MAPKBP1O60336 1514 aa7.49□□□□□ -1.21
BRAF-204ENST00000496384 KDM5BQ9UGL1 1544 aa7.49□□□□□ -1.21
BRAF-204ENST00000496384 ARAP1Q96P48 1450 aa7.47□□□□□ -1.21
BRAF-204ENST00000496384 ERICH3Q5RHP9 1530 aa7.47□□□□□ -1.21
BRAF-204ENST00000496384 TIMELESSQ9UNS1 1208 aa7.46□□□□□ -1.21
BRAF-204ENST00000496384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.46□□□□□ -1.22
BRAF-204ENST00000496384 SCRIBQ14160 1630 aa7.46□□□□□ -1.22
BRAF-204ENST00000496384 PPP1R15AO75807 674 aaPredicted RBP7.45□□□□□ -1.22
BRAF-204ENST00000496384 CCER1Q8TC90 406 aaPredicted RBP7.44□□□□□ -1.22
BRAF-204ENST00000496384 NCAPD3P42695 1498 aa7.41□□□□□ -1.22
BRAF-204ENST00000496384 BCL11AQ9H165 835 aa7.41□□□□□ -1.22
BRAF-204ENST00000496384 FANCIQ9NVI1 1328 aa7.4□□□□□ -1.22
BRAF-204ENST00000496384 SMARCA4P51532 1647 aa7.4□□□□□ -1.22
BRAF-204ENST00000496384 RAPGEF2Q9Y4G8 1499 aa7.4□□□□□ -1.23
BRAF-204ENST00000496384 WIZO95785 1651 aa7.4□□□□□ -1.23
BRAF-204ENST00000496384 MSH5O43196 834 aa7.39□□□□□ -1.23
BRAF-204ENST00000496384 SYNJ1O43426 1573 aa7.39□□□□□ -1.23
BRAF-204ENST00000496384 CCER2I3L3R5 266 aa7.38□□□□□ -1.23
BRAF-204ENST00000496384 ATAD2BQ9ULI0 1458 aa7.37□□□□□ -1.23
BRAF-204ENST00000496384 DENND4BO75064 1496 aaPredicted RBP7.34□□□□□ -1.23
BRAF-204ENST00000496384 RNF123Q5XPI4 1314 aa7.34□□□□□ -1.23
BRAF-204ENST00000496384 KANK4Q5T7N3 995 aaPredicted RBP7.33□□□□□ -1.24
BRAF-204ENST00000496384 NCOA2Q15596 1464 aa7.33□□□□□ -1.24
BRAF-204ENST00000496384 ARHGAP35Q9NRY4 1499 aa7.33□□□□□ -1.24
BRAF-204ENST00000496384 ERICH6BQ5W0A0 696 aa7.32□□□□□ -1.24
BRAF-204ENST00000496384 BICRAQ9NZM4 1560 aa7.32□□□□□ -1.24
BRAF-204ENST00000496384 TOP2BQ02880 1626 aa7.29□□□□□ -1.24
BRAF-204ENST00000496384 ARHGEF11O15085 1522 aa7.29□□□□□ -1.24
BRAF-204ENST00000496384 AQRO60306 1485 aaKnown RBP eCLIP7.28□□□□□ -1.24
BRAF-204ENST00000496384 CCNB3Q8WWL7 1395 aa7.28□□□□□ -1.24
BRAF-204ENST00000496384 AKNAQ7Z591 1439 aa7.28□□□□□ -1.24
BRAF-204ENST00000496384 DCAF8L2P0C7V8 631 aa7.28□□□□□ -1.24
BRAF-204ENST00000496384 RBM19Q9Y4C8 960 aaKnown RBP7.28□□□□□ -1.24
BRAF-204ENST00000496384 PHLDB1Q86UU1 1377 aa7.28□□□□□ -1.24
BRAF-204ENST00000496384 IGF1RP08069 1367 aa7.27□□□□□ -1.25
BRAF-204ENST00000496384 CFTRP13569 1480 aa7.25□□□□□ -1.25
BRAF-204ENST00000496384 RAB3GAP2Q9H2M9 1393 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 379.9 ms