RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 TACC2O95359 2948 aa0.39□□□□□ -2.35
SSR3-208ENST00000496050 ATXN8Q156A1 80 aa0.39□□□□□ -2.35
SSR3-208ENST00000496050 PRUNE2Q8WUY3 3088 aa0.39□□□□□ -2.35
SSR3-208ENST00000496050 CSPG4Q6UVK1 2322 aa0.39□□□□□ -2.35
SSR3-208ENST00000496050 NWD1Q149M9 1564 aa0.39□□□□□ -2.35
SSR3-208ENST00000496050 CDC42BPGQ6DT37 1551 aa0.39□□□□□ -2.35
SSR3-208ENST00000496050 PREX1Q8TCU6 1659 aa0.39□□□□□ -2.35
SSR3-208ENST00000496050 ERICH3Q5RHP9 1530 aa0.38□□□□□ -2.35
SSR3-208ENST00000496050 TSC2P49815 1807 aa0.38□□□□□ -2.35
SSR3-208ENST00000496050 COL14A1Q05707 1796 aaKnown RBP0.38□□□□□ -2.35
SSR3-208ENST00000496050 ZC3H13Q5T200 1668 aaKnown RBP0.38□□□□□ -2.35
SSR3-208ENST00000496050 LELP1Q5T871 98 aa0.38□□□□□ -2.35
SSR3-208ENST00000496050 HILPDAQ9Y5L2 63 aa0.38□□□□□ -2.35
SSR3-208ENST00000496050 TIAM2Q8IVF5 1701 aa0.38□□□□□ -2.35
SSR3-208ENST00000496050 EFCAB5A4FU69 1503 aa0.38□□□□□ -2.35
SSR3-208ENST00000496050 LMTK2Q8IWU2 1503 aa0.38□□□□□ -2.35
SSR3-208ENST00000496050 BCORQ6W2J9 1755 aa0.37□□□□□ -2.35
SSR3-208ENST00000496050 NDUFA3O95167 84 aa0.37□□□□□ -2.35
SSR3-208ENST00000496050 KLK9Q2XQG4 91 aa0.37□□□□□ -2.35
SSR3-208ENST00000496050 KCNQ1DNQ9H478 68 aa0.37□□□□□ -2.35
SSR3-208ENST00000496050 U3KQA8 63 aa0.37□□□□□ -2.35
SSR3-208ENST00000496050 EIF2AK4Q9P2K8 1649 aaKnown RBP0.37□□□□□ -2.35
SSR3-208ENST00000496050 PKHD1P08F94 4074 aa0.37□□□□□ -2.35
SSR3-208ENST00000496050 CFAP43Q8NDM7 1665 aa0.37□□□□□ -2.35
SSR3-208ENST00000496050 LRP1BQ9NZR2 4599 aa0.37□□□□□ -2.35
SSR3-208ENST00000496050 ALMS1Q8TCU4 4167 aa0.36□□□□□ -2.35
SSR3-208ENST00000496050 DEFB131BA0A096LNP1 70 aa0.36□□□□□ -2.35
SSR3-208ENST00000496050 C3orf79P0CE67 100 aa0.36□□□□□ -2.35
SSR3-208ENST00000496050 ENHOQ6UWT2 76 aa0.36□□□□□ -2.35
SSR3-208ENST00000496050 HFM1A2PYH4 1435 aa0.36□□□□□ -2.35
SSR3-208ENST00000496050 APC2O95996 2303 aa0.36□□□□□ -2.35
SSR3-208ENST00000496050 RALGAPBQ86X10 1494 aa0.35□□□□□ -2.35
SSR3-208ENST00000496050 MADDQ8WXG6 1647 aa0.35□□□□□ -2.35
SSR3-208ENST00000496050 WFDC13Q8IUB5 93 aa0.35□□□□□ -2.35
SSR3-208ENST00000496050 CSMD3Q7Z407 3707 aa0.35□□□□□ -2.35
SSR3-208ENST00000496050 ABCA9Q8IUA7 1624 aa0.35□□□□□ -2.35
SSR3-208ENST00000496050 MROH1Q8NDA8 1641 aa0.35□□□□□ -2.35
SSR3-208ENST00000496050 CICQ96RK0 1608 aaPredicted RBP0.35□□□□□ -2.35
SSR3-208ENST00000496050 LRP2P98164 4655 aa0.34□□□□□ -2.35
SSR3-208ENST00000496050 CHD7Q9P2D1 2997 aa0.34□□□□□ -2.35
SSR3-208ENST00000496050 NHSQ6T4R5 1651 aa0.34□□□□□ -2.35
SSR3-208ENST00000496050 ITSN1Q15811 1721 aa0.34□□□□□ -2.36
SSR3-208ENST00000496050 PARP4Q9UKK3 1724 aaKnown RBP0.34□□□□□ -2.36
SSR3-208ENST00000496050 NESP48681 1621 aa0.34□□□□□ -2.36
SSR3-208ENST00000496050 PRKDCP78527 4128 aaKnown RBP0.34□□□□□ -2.36
SSR3-208ENST00000496050 WIZO95785 1651 aa0.33□□□□□ -2.36
SSR3-208ENST00000496050 STARD9Q9P2P6 4700 aa0.33□□□□□ -2.36
SSR3-208ENST00000496050 INO80Q9ULG1 1556 aaPredicted RBP0.33□□□□□ -2.36
SSR3-208ENST00000496050 UBL5Q9BZL1 73 aa0.33□□□□□ -2.36
SSR3-208ENST00000496050 FXYD6Q9H0Q3 95 aa0.33□□□□□ -2.36
SSR3-208ENST00000496050 PRO3102Q9H379 93 aa0.33□□□□□ -2.36
SSR3-208ENST00000496050 GNG13Q9P2W3 67 aa0.33□□□□□ -2.36
SSR3-208ENST00000496050 LRP1Q07954 4544 aaKnown RBP0.33□□□□□ -2.36
SSR3-208ENST00000496050 HRNRQ86YZ3 2850 aaPredicted RBP0.33□□□□□ -2.36
SSR3-208ENST00000496050 TNRC6CQ9HCJ0 1690 aaKnown RBP0.33□□□□□ -2.36
SSR3-208ENST00000496050 RICTORQ6R327 1708 aa0.33□□□□□ -2.36
SSR3-208ENST00000496050 PKD1P98161 4303 aa0.32□□□□□ -2.36
SSR3-208ENST00000496050 MRPL33O75394 65 aaKnown RBP0.32□□□□□ -2.36
SSR3-208ENST00000496050 DEFB114Q30KQ6 69 aa0.32□□□□□ -2.36
SSR3-208ENST00000496050 S100ZQ8WXG8 99 aa0.32□□□□□ -2.36
SSR3-208ENST00000496050 PLCH1Q4KWH8 1693 aa0.32□□□□□ -2.36
SSR3-208ENST00000496050 ETDCA0A1B0GVM5 59 aa0.31□□□□□ -2.36
SSR3-208ENST00000496050 LYNX1G3V0Z9 82 aa0.31□□□□□ -2.36
SSR3-208ENST00000496050 H0YAA0 97 aa0.31□□□□□ -2.36
SSR3-208ENST00000496050 CRIP1P50238 77 aa0.31□□□□□ -2.36
SSR3-208ENST00000496050 LINC00158P58513 81 aa0.31□□□□□ -2.36
SSR3-208ENST00000496050 LYSTQ99698 3801 aa0.31□□□□□ -2.36
SSR3-208ENST00000496050 RNF17Q9BXT8 1623 aaKnown RBP0.31□□□□□ -2.36
SSR3-208ENST00000496050 DMDP11532 3685 aa0.31□□□□□ -2.36
SSR3-208ENST00000496050 CMYA5Q8N3K9 4069 aa0.3□□□□□ -2.36
SSR3-208ENST00000496050 LINC01549A6NIU2 74 aa0.3□□□□□ -2.36
SSR3-208ENST00000496050 HSPG2P98160 4391 aa0.3□□□□□ -2.36
SSR3-208ENST00000496050 DYNC1H1Q14204 4646 aaKnown RBP0.29□□□□□ -2.36
SSR3-208ENST00000496050 TRRAPQ9Y4A5 3859 aa0.29□□□□□ -2.36
SSR3-208ENST00000496050 DNAH1Q9P2D7 4330 aa0.29□□□□□ -2.36
SSR3-208ENST00000496050 WNK2Q9Y3S1 2297 aa0.29□□□□□ -2.36
SSR3-208ENST00000496050 AKAP9Q99996 3911 aa0.29□□□□□ -2.36
SSR3-208ENST00000496050 TJP1Q07157 1748 aa0.29□□□□□ -2.36
SSR3-208ENST00000496050 KNL1Q8NG31 2342 aa0.29□□□□□ -2.36
SSR3-208ENST00000496050 DEPDC5O75140 1603 aa0.28□□□□□ -2.36
SSR3-208ENST00000496050 DDX60LQ5H9U9 1706 aaKnown RBP0.28□□□□□ -2.36
SSR3-208ENST00000496050 PRM1P04553 51 aa0.28□□□□□ -2.36
SSR3-208ENST00000496050 SFTA3P0C7M3 94 aa0.28□□□□□ -2.36
SSR3-208ENST00000496050 PLXNC1O60486 1568 aa0.28□□□□□ -2.37
SSR3-208ENST00000496050 NRAPQ86VF7 1730 aa0.27□□□□□ -2.37
SSR3-208ENST00000496050 THOC2Q8NI27 1593 aaKnown RBP0.27□□□□□ -2.37
SSR3-208ENST00000496050 DYNC2H1Q8NCM8 4307 aaKnown RBP0.26□□□□□ -2.37
SSR3-208ENST00000496050 ABCC6O95255 1503 aa0.26□□□□□ -2.37
SSR3-208ENST00000496050 SACSQ9NZJ4 4579 aa0.26□□□□□ -2.37
SSR3-208ENST00000496050 C4AP0C0L4 1744 aa0.26□□□□□ -2.37
SSR3-208ENST00000496050 C4BP0C0L5 1744 aa0.26□□□□□ -2.37
SSR3-208ENST00000496050 CCDC180Q9P1Z9 1646 aa0.25□□□□□ -2.37
SSR3-208ENST00000496050 K7EMI3 77 aa0.25□□□□□ -2.37
SSR3-208ENST00000496050 M0R2T5 61 aa0.25□□□□□ -2.37
SSR3-208ENST00000496050 SMIM5Q71RC9 77 aa0.25□□□□□ -2.37
SSR3-208ENST00000496050 ACACAQ13085 2346 aa0.25□□□□□ -2.37
SSR3-208ENST00000496050 ABCA6Q8N139 1617 aa0.24□□□□□ -2.37
SSR3-208ENST00000496050 DNAH9Q9NYC9 4486 aa0.24□□□□□ -2.37
SSR3-208ENST00000496050 DEFB130BP0DP73 79 aa0.24□□□□□ -2.37
SSR3-208ENST00000496050 DEFB130AP0DP74 79 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 237.9 ms