RNA–Protein interactions for RNA: ENST00000493960.6

FAM208A-209, Transcript of family with sequence similarity 208 member A, humanhuman

APPRIS P2 TSL 5 BASIC

Gene FAM208A, Length 5,600 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208A-209ENST00000493960 TENM4Q6N022 2769 aa9.26□□□□□ -0.93
FAM208A-209ENST00000493960 LRBAP50851 2863 aa9.26□□□□□ -0.93
FAM208A-209ENST00000493960 NIPBLQ6KC79 2804 aaeCLIP9.25□□□□□ -0.93
FAM208A-209ENST00000493960 FRYLO94915 3013 aa9.23□□□□□ -0.93
FAM208A-209ENST00000493960 CELSR3Q9NYQ7 3312 aa9.22□□□□□ -0.93
FAM208A-209ENST00000493960 TPRXLQ17RH7 258 aa9.2□□□□□ -0.94
FAM208A-209ENST00000493960 SZT2Q5T011 3432 aa9.19□□□□□ -0.94
FAM208A-209ENST00000493960 ADGRG4Q8IZF6 3080 aa9.16□□□□□ -0.94
FAM208A-209ENST00000493960 EYSQ5T1H1 3165 aa9.15□□□□□ -0.94
FAM208A-209ENST00000493960 DMXL2Q8TDJ6 3036 aa9.15□□□□□ -0.95
FAM208A-209ENST00000493960 LAMA1P25391 3075 aa9.14□□□□□ -0.95
FAM208A-209ENST00000493960 KRTAP16-1A8MUX0 517 aa9.09□□□□□ -0.95
FAM208A-209ENST00000493960 REV3LO60673 3130 aa9.09□□□□□ -0.95
FAM208A-209ENST00000493960 BOD1L1Q8NFC6 3051 aa9.09□□□□□ -0.96
FAM208A-209ENST00000493960 CRYBG3Q68DQ2 2970 aa9.08□□□□□ -0.96
FAM208A-209ENST00000493960 VCANP13611 3396 aa9.08□□□□□ -0.96
FAM208A-209ENST00000493960 FREM2Q5SZK8 3169 aa9.07□□□□□ -0.96
FAM208A-209ENST00000493960 COL6A3P12111 3177 aa9.06□□□□□ -0.96
FAM208A-209ENST00000493960 ZZEF1O43149 2961 aa9.05□□□□□ -0.96
FAM208A-209ENST00000493960 A0A1B0GVY2 172 aa9.05□□□□□ -0.96
FAM208A-209ENST00000493960 ASH1LQ9NR48 2969 aaKnown RBP9.05□□□□□ -0.96
FAM208A-209ENST00000493960 PP632Q6XCG6 107 aa9.04□□□□□ -0.96
FAM208A-209ENST00000493960 CELSR2Q9HCU4 2923 aa9.03□□□□□ -0.96
FAM208A-209ENST00000493960 KRTAP13-3Q3SY46 172 aa9.02□□□□□ -0.96
FAM208A-209ENST00000493960 KRTAP10-8P60410 259 aa9.02□□□□□ -0.97
FAM208A-209ENST00000493960 NBEAQ8NFP9 2946 aa9.01□□□□□ -0.97
FAM208A-209ENST00000493960 TNRC18O15417 2968 aaPredicted RBP9□□□□□ -0.97
FAM208A-209ENST00000493960 C10orf95Q9H7T3 257 aa8.98□□□□□ -0.97
FAM208A-209ENST00000493960 DNAH14Q0VDD8 3507 aa8.97□□□□□ -0.97
FAM208A-209ENST00000493960 DCHS2Q6V1P9 2916 aa8.96□□□□□ -0.98
FAM208A-209ENST00000493960 NDUFAF8A1L188 74 aa8.95□□□□□ -0.98
FAM208A-209ENST00000493960 ZANQ9Y493 2812 aa8.93□□□□□ -0.98
FAM208A-209ENST00000493960 HRNRQ86YZ3 2850 aaPredicted RBP8.92□□□□□ -0.98
FAM208A-209ENST00000493960 H0YAA0 97 aa8.92□□□□□ -0.98
FAM208A-209ENST00000493960 KRTAP10-10P60014 251 aa8.91□□□□□ -0.98
FAM208A-209ENST00000493960 CFAP47Q6ZTR5 3102 aa8.82□□□□□ -1
FAM208A-209ENST00000493960 USP34Q70CQ2 3546 aa8.82□□□□□ -1
FAM208A-209ENST00000493960 PRO2289Q9P1D8 64 aa8.82□□□□□ -1
FAM208A-209ENST00000493960 SPTBN5Q9NRC6 3674 aaKnown RBP8.78□□□□□ -1
FAM208A-209ENST00000493960 P0C880 135 aa8.77□□□□□ -1.01
FAM208A-209ENST00000493960 NF1P21359 2839 aa8.77□□□□□ -1.01
FAM208A-209ENST00000493960 DMXL1Q9Y485 3027 aa8.76□□□□□ -1.01
FAM208A-209ENST00000493960 TENM2Q9NT68 2774 aa8.74□□□□□ -1.01
FAM208A-209ENST00000493960 TENM1Q9UKZ4 2725 aa8.74□□□□□ -1.01
FAM208A-209ENST00000493960 FBN2P35556 2912 aa8.67□□□□□ -1.02
FAM208A-209ENST00000493960 TENM3Q9P273 2699 aa8.67□□□□□ -1.02
FAM208A-209ENST00000493960 SPEGQ15772 3267 aa8.6□□□□□ -1.03
FAM208A-209ENST00000493960 MXRA5Q9NR99 2828 aa8.57□□□□□ -1.04
FAM208A-209ENST00000493960 CELSR1Q9NYQ6 3014 aa8.54□□□□□ -1.04
FAM208A-209ENST00000493960 TGP01266 2768 aa8.49□□□□□ -1.05
FAM208A-209ENST00000493960 LOC400499M0QZD8 3231 aa8.46□□□□□ -1.05
FAM208A-209ENST00000493960 KRTAP12-2P59991 146 aa8.42□□□□□ -1.06
FAM208A-209ENST00000493960 PDZD2O15018 2839 aa8.41□□□□□ -1.06
FAM208A-209ENST00000493960 KRTAP13-4Q3LI77 160 aa8.35□□□□□ -1.07
FAM208A-209ENST00000493960 KRTAP3-1Q9BYR8 98 aa8.32□□□□□ -1.08
FAM208A-209ENST00000493960 PKD1L1Q8TDX9 2849 aa8.3□□□□□ -1.08
FAM208A-209ENST00000493960 KRTAP12-1P59990 96 aa8.3□□□□□ -1.08
FAM208A-209ENST00000493960 VWFP04275 2813 aa8.18□□□□□ -1.1
FAM208A-209ENST00000493960 RELNP78509 3460 aa8.17□□□□□ -1.1
FAM208A-209ENST00000493960 MYO15AQ9UKN7 3530 aa8.17□□□□□ -1.1
FAM208A-209ENST00000493960 WDFY3Q8IZQ1 3526 aa8.17□□□□□ -1.1
FAM208A-209ENST00000493960 OTOGQ6ZRI0 2925 aa8.13□□□□□ -1.11
FAM208A-209ENST00000493960 DCHS1Q96JQ0 3298 aa8.11□□□□□ -1.11
FAM208A-209ENST00000493960 MT1HL1P0DM35 61 aa8.1□□□□□ -1.11
FAM208A-209ENST00000493960 ANK3Q12955 4377 aaKnown RBP8.1□□□□□ -1.11
FAM208A-209ENST00000493960 NBPF19A0A087WUL8 3843 aa8.07□□□□□ -1.12
FAM208A-209ENST00000493960 KRTAP10-6P60371 365 aaPredicted RBP8.06□□□□□ -1.12
FAM208A-209ENST00000493960 KRTAP15-1Q3LI76 137 aa7.98□□□□□ -1.13
FAM208A-209ENST00000493960 ASPMQ8IZT6 3477 aa7.96□□□□□ -1.14
FAM208A-209ENST00000493960 FBN1P35555 2871 aaKnown RBP7.94□□□□□ -1.14
FAM208A-209ENST00000493960 KRTAP10-4P60372 401 aaPredicted RBP7.89□□□□□ -1.15
FAM208A-209ENST00000493960 FBN3Q75N90 2809 aa7.84□□□□□ -1.15
FAM208A-209ENST00000493960 LAMA5O15230 3695 aa7.82□□□□□ -1.16
FAM208A-209ENST00000493960 ZFHX4Q86UP3 3567 aa7.8□□□□□ -1.16
FAM208A-209ENST00000493960 KRTAP3-3Q9BYR6 98 aa7.8□□□□□ -1.16
FAM208A-209ENST00000493960 KRTAP4-5Q9BYR2 181 aa7.79□□□□□ -1.16
FAM208A-209ENST00000493960 KRTAP3-2Q9BYR7 98 aa7.79□□□□□ -1.16
FAM208A-209ENST00000493960 ZFHX3Q15911 3703 aa7.77□□□□□ -1.17
FAM208A-209ENST00000493960 MEGF8Q7Z7M0 2845 aa7.73□□□□□ -1.17
FAM208A-209ENST00000493960 KRTAP10-12P60413 245 aa7.7□□□□□ -1.18
FAM208A-209ENST00000493960 SRRM2Q9UQ35 2752 aaKnown RBP7.69□□□□□ -1.18
FAM208A-209ENST00000493960 HUWE1Q7Z6Z7 4374 aaKnown RBP7.68□□□□□ -1.18
FAM208A-209ENST00000493960 CSMD1Q96PZ7 3565 aa7.66□□□□□ -1.18
FAM208A-209ENST00000493960 ALMS1Q8TCU4 4167 aa7.66□□□□□ -1.18
FAM208A-209ENST00000493960 TRRAPQ9Y4A5 3859 aa7.57□□□□□ -1.2
FAM208A-209ENST00000493960 COL7A1Q02388 2944 aa7.56□□□□□ -1.2
FAM208A-209ENST00000493960 SMG1Q96Q15 3661 aaKnown RBP7.56□□□□□ -1.2
FAM208A-209ENST00000493960 DMDP11532 3685 aa7.55□□□□□ -1.2
FAM208A-209ENST00000493960 CSMD2Q7Z408 3487 aa7.47□□□□□ -1.21
FAM208A-209ENST00000493960 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.21
FAM208A-209ENST00000493960 KRTAP12-3P60328 96 aa7.46□□□□□ -1.22
FAM208A-209ENST00000493960 CRCT1Q9UGL9 99 aa7.43□□□□□ -1.22
FAM208A-209ENST00000493960 INE1O15225 51 aa7.41□□□□□ -1.22
FAM208A-209ENST00000493960 SPENQ96T58 3664 aaKnown RBP7.37□□□□□ -1.23
FAM208A-209ENST00000493960 SVEP1Q4LDE5 3571 aa7.36□□□□□ -1.23
FAM208A-209ENST00000493960 LCE3AQ5TA76 89 aa7.36□□□□□ -1.23
FAM208A-209ENST00000493960 LORP23490 312 aaPredicted RBP7.33□□□□□ -1.24
FAM208A-209ENST00000493960 MUC3AQ02505 3323 aa7.33□□□□□ -1.24
FAM208A-209ENST00000493960 CUBNO60494 3623 aa7.32□□□□□ -1.24
FAM208A-209ENST00000493960 BSNQ9UPA5 3926 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms