RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 KMT2AQ03164 3969 aa0.47□□□□□ -2.33
VPS36-205ENST00000492650 LPAP08519 4548 aa0.47□□□□□ -2.33
VPS36-205ENST00000492650 SPRR2DP22532 72 aa0.47□□□□□ -2.33
VPS36-205ENST00000492650 LYSTQ99698 3801 aa0.47□□□□□ -2.33
VPS36-205ENST00000492650 IGSF10Q6WRI0 2623 aa0.47□□□□□ -2.33
VPS36-205ENST00000492650 CLTCL1P53675 1640 aa0.46□□□□□ -2.34
VPS36-205ENST00000492650 C9orf92A6NGG3 77 aa0.46□□□□□ -2.34
VPS36-205ENST00000492650 MYCBP2O75592 4640 aa0.45□□□□□ -2.34
VPS36-205ENST00000492650 M0QY20 66 aa0.45□□□□□ -2.34
VPS36-205ENST00000492650 SNRPGP62308 76 aaKnown RBP0.45□□□□□ -2.34
VPS36-205ENST00000492650 CELSR1Q9NYQ6 3014 aa0.45□□□□□ -2.34
VPS36-205ENST00000492650 MUC5BQ9HC84 5762 aaPredicted RBP0.44□□□□□ -2.34
VPS36-205ENST00000492650 ACACAQ13085 2346 aa0.44□□□□□ -2.34
VPS36-205ENST00000492650 NF1P21359 2839 aa0.43□□□□□ -2.34
VPS36-205ENST00000492650 FLNBO75369 2602 aaKnown RBP0.43□□□□□ -2.34
VPS36-205ENST00000492650 A8MTW9 85 aa0.42□□□□□ -2.34
VPS36-205ENST00000492650 SPRR2BP35325 72 aa0.42□□□□□ -2.34
VPS36-205ENST00000492650 NSD1Q96L73 2696 aaPredicted RBP0.42□□□□□ -2.34
VPS36-205ENST00000492650 MTORP42345 2549 aa0.42□□□□□ -2.34
VPS36-205ENST00000492650 VPS13BQ7Z7G8 4022 aa0.42□□□□□ -2.34
VPS36-205ENST00000492650 SRRM2Q9UQ35 2752 aaKnown RBP0.41□□□□□ -2.34
VPS36-205ENST00000492650 HRNRQ86YZ3 2850 aaPredicted RBP0.41□□□□□ -2.34
VPS36-205ENST00000492650 RIF1Q5UIP0 2472 aaKnown RBP0.41□□□□□ -2.34
VPS36-205ENST00000492650 SETD2Q9BYW2 2564 aaPredicted RBP0.41□□□□□ -2.34
VPS36-205ENST00000492650 DMBT1Q9UGM3 2413 aaPredicted RBP0.41□□□□□ -2.34
VPS36-205ENST00000492650 H3BNG1 76 aa0.41□□□□□ -2.34
VPS36-205ENST00000492650 FLNCQ14315 2725 aa0.4□□□□□ -2.35
VPS36-205ENST00000492650 DUOX1Q9NRD9 1551 aa0.4□□□□□ -2.35
VPS36-205ENST00000492650 GCN1Q92616 2671 aaKnown RBP0.4□□□□□ -2.35
VPS36-205ENST00000492650 M0QZ58 72 aa0.39□□□□□ -2.35
VPS36-205ENST00000492650 SPG11Q96JI7 2443 aa0.39□□□□□ -2.35
VPS36-205ENST00000492650 ANKHD1Q8IWZ3 2542 aaKnown RBP0.39□□□□□ -2.35
VPS36-205ENST00000492650 FAT4Q6V0I7 4981 aa0.39□□□□□ -2.35
VPS36-205ENST00000492650 SPTBN4Q9H254 2564 aa0.39□□□□□ -2.35
VPS36-205ENST00000492650 EPG5Q9HCE0 2579 aa0.39□□□□□ -2.35
VPS36-205ENST00000492650 STAB1Q9NY15 2570 aa0.39□□□□□ -2.35
VPS36-205ENST00000492650 LRRK2Q5S007 2527 aa0.38□□□□□ -2.35
VPS36-205ENST00000492650 SACSQ9NZJ4 4579 aa0.38□□□□□ -2.35
VPS36-205ENST00000492650 MROH2BQ7Z745 1585 aa0.38□□□□□ -2.35
VPS36-205ENST00000492650 DNAH11Q96DT5 4516 aa0.38□□□□□ -2.35
VPS36-205ENST00000492650 SONP18583 2426 aaKnown RBP0.38□□□□□ -2.35
VPS36-205ENST00000492650 HECTD4Q9Y4D8 3996 aa0.38□□□□□ -2.35
VPS36-205ENST00000492650 PKD1P98161 4303 aa0.37□□□□□ -2.35
VPS36-205ENST00000492650 MDN1Q9NU22 5596 aa0.37□□□□□ -2.35
VPS36-205ENST00000492650 DNAH9Q9NYC9 4486 aa0.37□□□□□ -2.35
VPS36-205ENST00000492650 TNP1P09430 55 aa0.37□□□□□ -2.35
VPS36-205ENST00000492650 CUBNO60494 3623 aa0.37□□□□□ -2.35
VPS36-205ENST00000492650 FAM186AA6NE01 2351 aa0.37□□□□□ -2.35
VPS36-205ENST00000492650 DCHS2Q6V1P9 2916 aa0.36□□□□□ -2.35
VPS36-205ENST00000492650 POLR2KP53803 58 aaKnown RBP0.36□□□□□ -2.35
VPS36-205ENST00000492650 CLPSL2Q6UWE3 100 aa0.36□□□□□ -2.35
VPS36-205ENST00000492650 FLNAP21333 2647 aaKnown RBP0.36□□□□□ -2.35
VPS36-205ENST00000492650 SYNE2Q8WXH0 6885 aaKnown RBP0.36□□□□□ -2.35
VPS36-205ENST00000492650 ZZEF1O43149 2961 aa0.36□□□□□ -2.35
VPS36-205ENST00000492650 HSPG2P98160 4391 aa0.36□□□□□ -2.35
VPS36-205ENST00000492650 A0A0C4DFX4 3053 aa0.35□□□□□ -2.35
VPS36-205ENST00000492650 UTP20O75691 2785 aaKnown RBP0.35□□□□□ -2.35
VPS36-205ENST00000492650 DNAH3Q8TD57 4116 aa0.35□□□□□ -2.35
VPS36-205ENST00000492650 FASNP49327 2511 aaKnown RBP0.34□□□□□ -2.35
VPS36-205ENST00000492650 MACF1Q9UPN3 7388 aaKnown RBP0.34□□□□□ -2.35
VPS36-205ENST00000492650 LRP1BQ9NZR2 4599 aa0.34□□□□□ -2.36
VPS36-205ENST00000492650 PDZD2O15018 2839 aa0.34□□□□□ -2.36
VPS36-205ENST00000492650 TENM2Q9NT68 2774 aa0.34□□□□□ -2.36
VPS36-205ENST00000492650 FSIP2Q5CZC0 6907 aa0.34□□□□□ -2.36
VPS36-205ENST00000492650 MAST4O15021 2626 aa0.33□□□□□ -2.36
VPS36-205ENST00000492650 RPL39P62891 51 aaKnown RBP0.33□□□□□ -2.36
VPS36-205ENST00000492650 DEFB110Q30KQ9 67 aa0.33□□□□□ -2.36
VPS36-205ENST00000492650 FLGP20930 4061 aaPredicted RBP0.32□□□□□ -2.36
VPS36-205ENST00000492650 ANK3Q12955 4377 aaKnown RBP0.32□□□□□ -2.36
VPS36-205ENST00000492650 DMXL1Q9Y485 3027 aa0.32□□□□□ -2.36
VPS36-205ENST00000492650 PHGR1C9JFL3 82 aa0.32□□□□□ -2.36
VPS36-205ENST00000492650 SPRR2AP35326 72 aa0.32□□□□□ -2.36
VPS36-205ENST00000492650 KRTAP6-2Q3LI66 62 aa0.32□□□□□ -2.36
VPS36-205ENST00000492650 ANKRD11Q6UB99 2663 aaPredicted RBP0.32□□□□□ -2.36
VPS36-205ENST00000492650 PKHD1P08F94 4074 aa0.32□□□□□ -2.36
VPS36-205ENST00000492650 COL7A1Q02388 2944 aa0.31□□□□□ -2.36
VPS36-205ENST00000492650 COL6A3P12111 3177 aa0.31□□□□□ -2.36
VPS36-205ENST00000492650 MUC5ACP98088 5654 aa0.31□□□□□ -2.36
VPS36-205ENST00000492650 TACC2O95359 2948 aa0.31□□□□□ -2.36
VPS36-205ENST00000492650 COL6A5A8TX70 2615 aa0.31□□□□□ -2.36
VPS36-205ENST00000492650 GCC2Q8IWJ2 1684 aa0.3□□□□□ -2.36
VPS36-205ENST00000492650 APOBP04114 4563 aaKnown RBP0.3□□□□□ -2.36
VPS36-205ENST00000492650 HMCN2Q8NDA2 5059 aa0.29□□□□□ -2.36
VPS36-205ENST00000492650 ACACBO00763 2458 aa0.29□□□□□ -2.36
VPS36-205ENST00000492650 MT1AP04731 61 aa0.29□□□□□ -2.36
VPS36-205ENST00000492650 DNAH2Q9P225 4427 aa0.29□□□□□ -2.36
VPS36-205ENST00000492650 RPL39LQ96EH5 51 aaKnown RBP0.28□□□□□ -2.36
VPS36-205ENST00000492650 CCDC168Q8NDH2 2452 aa0.28□□□□□ -2.36
VPS36-205ENST00000492650 MYO18BQ8IUG5 2567 aa0.28□□□□□ -2.37
VPS36-205ENST00000492650 KMT2DO14686 5537 aa0.28□□□□□ -2.37
VPS36-205ENST00000492650 TEP1Q99973 2627 aaKnown RBP0.28□□□□□ -2.37
VPS36-205ENST00000492650 NBEAL2Q6ZNJ1 2754 aa0.28□□□□□ -2.37
VPS36-205ENST00000492650 FAT3Q8TDW7 4589 aa0.27□□□□□ -2.37
VPS36-205ENST00000492650 LRP2P98164 4655 aa0.27□□□□□ -2.37
VPS36-205ENST00000492650 PKHD1L1Q86WI1 4243 aa0.27□□□□□ -2.37
VPS36-205ENST00000492650 AKAP9Q99996 3911 aa0.26□□□□□ -2.37
VPS36-205ENST00000492650 STAB2Q8WWQ8 2551 aa0.26□□□□□ -2.37
VPS36-205ENST00000492650 RANBP2P49792 3224 aaKnown RBP0.26□□□□□ -2.37
VPS36-205ENST00000492650 NBEAQ8NFP9 2946 aa0.26□□□□□ -2.37
VPS36-205ENST00000492650 COL12A1Q99715 3063 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms