RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 RETNLBQ9BQ08 111 aa9.27□□□□□ -0.93
BRD9-208ENST00000489816 DNAH5Q8TE73 4624 aa9.26□□□□□ -0.93
BRD9-208ENST00000489816 CYP4F30PQ9H0H9 118 aa9.25□□□□□ -0.93
BRD9-208ENST00000489816 A8MUN3 132 aa9.24□□□□□ -0.93
BRD9-208ENST00000489816 CD164Q04900 197 aa9.23□□□□□ -0.93
BRD9-208ENST00000489816 ALMS1Q8TCU4 4167 aa9.23□□□□□ -0.93
BRD9-208ENST00000489816 PRO0628Q9UI54 55 aa9.23□□□□□ -0.93
BRD9-208ENST00000489816 MRPL34Q9BQ48 92 aaKnown RBP9.22□□□□□ -0.93
BRD9-208ENST00000489816 KRTAP10-1P60331 282 aa9.22□□□□□ -0.93
BRD9-208ENST00000489816 Q5W150 140 aa9.2□□□□□ -0.94
BRD9-208ENST00000489816 A8MU10 97 aa9.18□□□□□ -0.94
BRD9-208ENST00000489816 H3BPC8 53 aa9.17□□□□□ -0.94
BRD9-208ENST00000489816 ASB16-AS1Q495Z4 193 aa9.16□□□□□ -0.94
BRD9-208ENST00000489816 COA5Q86WW8 74 aa9.16□□□□□ -0.94
BRD9-208ENST00000489816 Q1T7F1 81 aa9.16□□□□□ -0.94
BRD9-208ENST00000489816 TP53AIP1Q9HCN2 124 aa9.15□□□□□ -0.94
BRD9-208ENST00000489816 SPANXA2-OT1Q8N9U9 137 aa9.14□□□□□ -0.95
BRD9-208ENST00000489816 KRTAP13-2Q52LG2 175 aa9.13□□□□□ -0.95
BRD9-208ENST00000489816 VPS13BQ7Z7G8 4022 aa9.12□□□□□ -0.95
BRD9-208ENST00000489816 PKHD1P08F94 4074 aa9.12□□□□□ -0.95
BRD9-208ENST00000489816 IGLV7-46A0A075B6I9 117 aa9.12□□□□□ -0.95
BRD9-208ENST00000489816 PRR15LQ9BU68 103 aa9.12□□□□□ -0.95
BRD9-208ENST00000489816 FAT2Q9NYQ8 4349 aa9.12□□□□□ -0.95
BRD9-208ENST00000489816 SPAG11AQ6PDA7 123 aa9.11□□□□□ -0.95
BRD9-208ENST00000489816 Q8N9P0 234 aaPredicted RBP9.1□□□□□ -0.95
BRD9-208ENST00000489816 CHKB-CPT1BH3BT56 60 aa9.08□□□□□ -0.96
BRD9-208ENST00000489816 PKD1P98161 4303 aa9.08□□□□□ -0.96
BRD9-208ENST00000489816 SSBP3-AS1Q7Z2R9 100 aa9.07□□□□□ -0.96
BRD9-208ENST00000489816 Q5VV11 94 aa9.06□□□□□ -0.96
BRD9-208ENST00000489816 LINC00313P59037 77 aa9.05□□□□□ -0.96
BRD9-208ENST00000489816 SMR3BP02814 79 aaPredicted RBP9.04□□□□□ -0.96
BRD9-208ENST00000489816 C1orf195Q5TG92 126 aa9.04□□□□□ -0.96
BRD9-208ENST00000489816 HRES1P13985 223 aa9.04□□□□□ -0.96
BRD9-208ENST00000489816 PRR26Q8N8Z3 221 aa9.04□□□□□ -0.96
BRD9-208ENST00000489816 PLA2G1BP04054 148 aaKnown RBP9.03□□□□□ -0.96
BRD9-208ENST00000489816 Q6ZSA8 131 aa8.99□□□□□ -0.97
BRD9-208ENST00000489816 KRTAP1-4P0C5Y4 121 aa8.99□□□□□ -0.97
BRD9-208ENST00000489816 V9GYY9 64 aa8.98□□□□□ -0.97
BRD9-208ENST00000489816 FAT1Q14517 4588 aa8.97□□□□□ -0.97
BRD9-208ENST00000489816 LIMD2Q9BT23 127 aa8.96□□□□□ -0.98
BRD9-208ENST00000489816 LOC101927531A0A1B0GV80 90 aa8.96□□□□□ -0.98
BRD9-208ENST00000489816 A6NED7 52 aa8.96□□□□□ -0.98
BRD9-208ENST00000489816 SPTSSBQ8NFR3 76 aa8.96□□□□□ -0.98
BRD9-208ENST00000489816 KRTAP13-3Q3SY46 172 aa8.95□□□□□ -0.98
BRD9-208ENST00000489816 IGKV2D-30A0A075B6S6 120 aa8.95□□□□□ -0.98
BRD9-208ENST00000489816 IGKV2-30P06310 120 aa8.95□□□□□ -0.98
BRD9-208ENST00000489816 C4orf48Q5BLP8 95 aa8.95□□□□□ -0.98
BRD9-208ENST00000489816 TYMSOSQ8TAI1 123 aa8.95□□□□□ -0.98
BRD9-208ENST00000489816 C8orf87E5RJ46 101 aa8.91□□□□□ -0.98
BRD9-208ENST00000489816 SACSQ9NZJ4 4579 aa8.89□□□□□ -0.99
BRD9-208ENST00000489816 LCA10Q71F78 164 aa8.87□□□□□ -0.99
BRD9-208ENST00000489816 FAM229AH3BQW9 127 aa8.86□□□□□ -0.99
BRD9-208ENST00000489816 SPINK7P58062 85 aa8.85□□□□□ -0.99
BRD9-208ENST00000489816 PMAIP1Q13794 54 aa8.85□□□□□ -0.99
BRD9-208ENST00000489816 KRTAP16-1A8MUX0 517 aa8.84□□□□□ -0.99
BRD9-208ENST00000489816 DYNC1H1Q14204 4646 aaKnown RBP8.83□□□□□ -1
BRD9-208ENST00000489816 ACYP2P14621 99 aa8.82□□□□□ -1
BRD9-208ENST00000489816 C9orf92A6NGG3 77 aa8.81□□□□□ -1
BRD9-208ENST00000489816 Q75L30 129 aa8.81□□□□□ -1
BRD9-208ENST00000489816 LINC01558Q9Y6Z2 57 aa8.81□□□□□ -1
BRD9-208ENST00000489816 SPINK1P00995 79 aa8.78□□□□□ -1
BRD9-208ENST00000489816 LINC00304Q8N9R0 145 aa8.77□□□□□ -1
BRD9-208ENST00000489816 Q8N1X5 172 aa8.76□□□□□ -1.01
BRD9-208ENST00000489816 DMBT1Q9UGM3 2413 aaPredicted RBP8.75□□□□□ -1.01
BRD9-208ENST00000489816 DMAC1Q96GE9 116 aa8.75□□□□□ -1.01
BRD9-208ENST00000489816 FLG2Q5D862 2391 aaPredicted RBP8.75□□□□□ -1.01
BRD9-208ENST00000489816 KMT2CQ8NEZ4 4911 aaKnown RBP8.74□□□□□ -1.01
BRD9-208ENST00000489816 C7orf65Q6ZTY9 151 aa8.73□□□□□ -1.01
BRD9-208ENST00000489816 CDC42SE1Q9NRR8 79 aa8.67□□□□□ -1.02
BRD9-208ENST00000489816 A0A1B0GU69 56 aa8.65□□□□□ -1.02
BRD9-208ENST00000489816 LRP1Q07954 4544 aaKnown RBP8.64□□□□□ -1.03
BRD9-208ENST00000489816 APOBP04114 4563 aaKnown RBP8.64□□□□□ -1.03
BRD9-208ENST00000489816 ATP11AUNQ6ZP68 121 aa8.62□□□□□ -1.03
BRD9-208ENST00000489816 MYCBP2O75592 4640 aa8.57□□□□□ -1.04
BRD9-208ENST00000489816 A0A1B0GVY2 172 aa8.57□□□□□ -1.04
BRD9-208ENST00000489816 KRTAP10-4P60372 401 aaPredicted RBP8.54□□□□□ -1.04
BRD9-208ENST00000489816 RYR2Q92736 4967 aa8.54□□□□□ -1.04
BRD9-208ENST00000489816 A6NN06 94 aa8.52□□□□□ -1.05
BRD9-208ENST00000489816 PKHD1L1Q86WI1 4243 aa8.49□□□□□ -1.05
BRD9-208ENST00000489816 KRTAP21-3Q3LHN1 58 aa8.47□□□□□ -1.05
BRD9-208ENST00000489816 KTN1-AS1Q86SY8 53 aa8.47□□□□□ -1.05
BRD9-208ENST00000489816 SEC61GP60059 68 aa8.44□□□□□ -1.06
BRD9-208ENST00000489816 MIR22HGQ0VDD5 57 aa8.44□□□□□ -1.06
BRD9-208ENST00000489816 RPS29P62273 56 aaKnown RBP8.43□□□□□ -1.06
BRD9-208ENST00000489816 UQCR11O14957 56 aa8.42□□□□□ -1.06
BRD9-208ENST00000489816 KRTAP3-1Q9BYR8 98 aa8.42□□□□□ -1.06
BRD9-208ENST00000489816 A8MUU9 505 aa8.42□□□□□ -1.06
BRD9-208ENST00000489816 ADM2Q7Z4H4 148 aa8.42□□□□□ -1.06
BRD9-208ENST00000489816 PRAC1Q96KF2 57 aa8.41□□□□□ -1.06
BRD9-208ENST00000489816 C20orf166-AS1Q96NR2 134 aa8.41□□□□□ -1.06
BRD9-208ENST00000489816 HSPG2P98160 4391 aa8.39□□□□□ -1.07
BRD9-208ENST00000489816 RYR3Q15413 4870 aa8.38□□□□□ -1.07
BRD9-208ENST00000489816 KIAA1109Q2LD37 5005 aa8.37□□□□□ -1.07
BRD9-208ENST00000489816 SPATA8Q6RVD6 105 aa8.36□□□□□ -1.07
BRD9-208ENST00000489816 FAT3Q8TDW7 4589 aa8.36□□□□□ -1.07
BRD9-208ENST00000489816 Q5VSD8 79 aa8.34□□□□□ -1.07
BRD9-208ENST00000489816 RBM12B-AS1Q9P1G2 102 aa8.33□□□□□ -1.08
BRD9-208ENST00000489816 KRTAP17-1Q9BYP8 105 aa8.32□□□□□ -1.08
BRD9-208ENST00000489816 TNXBP22105 4242 aa8.27□□□□□ -1.09
BRD9-208ENST00000489816 H0YAA0 97 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms