RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 KALRNO60229 2985 aa1.74□□□□□ -2.13
LMBR1-218ENST00000486837 RP1L1Q8IWN7 2480 aaPredicted RBP1.73□□□□□ -2.13
LMBR1-218ENST00000486837 CSPG4Q6UVK1 2322 aa1.73□□□□□ -2.13
LMBR1-218ENST00000486837 SPEGQ15772 3267 aa1.72□□□□□ -2.13
LMBR1-218ENST00000486837 MUC6Q6W4X9 2439 aa1.72□□□□□ -2.13
LMBR1-218ENST00000486837 DEFB135Q30KP9 77 aa1.72□□□□□ -2.13
LMBR1-218ENST00000486837 AKAP13Q12802 2813 aa1.72□□□□□ -2.13
LMBR1-218ENST00000486837 XIRP2A4UGR9 3374 aa1.72□□□□□ -2.13
LMBR1-218ENST00000486837 TRIOO75962 3097 aa1.72□□□□□ -2.13
LMBR1-218ENST00000486837 SPTBN5Q9NRC6 3674 aaKnown RBP1.71□□□□□ -2.14
LMBR1-218ENST00000486837 REV3LO60673 3130 aa1.71□□□□□ -2.14
LMBR1-218ENST00000486837 MAP1AP78559 2803 aaPredicted RBP1.71□□□□□ -2.14
LMBR1-218ENST00000486837 FRYQ5TBA9 3013 aa1.71□□□□□ -2.14
LMBR1-218ENST00000486837 ZNF462Q96JM2 2506 aa1.71□□□□□ -2.14
LMBR1-218ENST00000486837 DNAH12Q6ZR08 3092 aa1.7□□□□□ -2.14
LMBR1-218ENST00000486837 HTTP42858 3142 aa1.7□□□□□ -2.14
LMBR1-218ENST00000486837 MYCBP2O75592 4640 aa1.69□□□□□ -2.14
LMBR1-218ENST00000486837 USP34Q70CQ2 3546 aa1.69□□□□□ -2.14
LMBR1-218ENST00000486837 LAMA2P24043 3122 aaKnown RBP1.69□□□□□ -2.14
LMBR1-218ENST00000486837 DNAH11Q96DT5 4516 aa1.68□□□□□ -2.14
LMBR1-218ENST00000486837 COL12A1Q99715 3063 aa1.68□□□□□ -2.14
LMBR1-218ENST00000486837 DMDP11532 3685 aa1.68□□□□□ -2.14
LMBR1-218ENST00000486837 SPG11Q96JI7 2443 aa1.68□□□□□ -2.14
LMBR1-218ENST00000486837 ABCA2Q9BZC7 2435 aa1.68□□□□□ -2.14
LMBR1-218ENST00000486837 UBR5O95071 2799 aaPredicted RBP1.68□□□□□ -2.14
LMBR1-218ENST00000486837 CRYBG3Q68DQ2 2970 aa1.68□□□□□ -2.14
LMBR1-218ENST00000486837 F8P00451 2351 aa1.67□□□□□ -2.14
LMBR1-218ENST00000486837 DNAH1Q9P2D7 4330 aa1.67□□□□□ -2.14
LMBR1-218ENST00000486837 HIVEP3Q5T1R4 2406 aa1.67□□□□□ -2.14
LMBR1-218ENST00000486837 C5orf42Q9H799 3197 aa1.67□□□□□ -2.14
LMBR1-218ENST00000486837 NBASA2RRP1 2371 aa1.66□□□□□ -2.14
LMBR1-218ENST00000486837 CHD9Q3L8U1 2897 aa1.66□□□□□ -2.14
LMBR1-218ENST00000486837 CREBBPQ92793 2442 aa1.66□□□□□ -2.14
LMBR1-218ENST00000486837 NCOR2Q9Y618 2525 aa1.66□□□□□ -2.14
LMBR1-218ENST00000486837 DMXL1Q9Y485 3027 aa1.66□□□□□ -2.14
LMBR1-218ENST00000486837 FREM2Q5SZK8 3169 aa1.65□□□□□ -2.14
LMBR1-218ENST00000486837 PRRC2CQ9Y520 2896 aaKnown RBP1.65□□□□□ -2.14
LMBR1-218ENST00000486837 DNAH14Q0VDD8 3507 aa1.65□□□□□ -2.14
LMBR1-218ENST00000486837 AKAP9Q99996 3911 aa1.65□□□□□ -2.15
LMBR1-218ENST00000486837 VWFP04275 2813 aa1.65□□□□□ -2.15
LMBR1-218ENST00000486837 JMJD1CQ15652 2540 aa1.65□□□□□ -2.15
LMBR1-218ENST00000486837 ANKHD1Q8IWZ3 2542 aaKnown RBP1.65□□□□□ -2.15
LMBR1-218ENST00000486837 ZFHX4Q86UP3 3567 aa1.64□□□□□ -2.15
LMBR1-218ENST00000486837 RIF1Q5UIP0 2472 aaKnown RBP1.64□□□□□ -2.15
LMBR1-218ENST00000486837 CCDC168Q8NDH2 2452 aa1.64□□□□□ -2.15
LMBR1-218ENST00000486837 TRANK1O15050 2925 aa1.64□□□□□ -2.15
LMBR1-218ENST00000486837 EP400Q96L91 3159 aa1.64□□□□□ -2.15
LMBR1-218ENST00000486837 COL6A5A8TX70 2615 aa1.64□□□□□ -2.15
LMBR1-218ENST00000486837 LRBAP50851 2863 aa1.64□□□□□ -2.15
LMBR1-218ENST00000486837 NF1P21359 2839 aa1.63□□□□□ -2.15
LMBR1-218ENST00000486837 CELSR1Q9NYQ6 3014 aa1.63□□□□□ -2.15
LMBR1-218ENST00000486837 RPS29P62273 56 aaKnown RBP1.63□□□□□ -2.15
LMBR1-218ENST00000486837 NBPF19A0A087WUL8 3843 aa1.63□□□□□ -2.15
LMBR1-218ENST00000486837 NAV2Q8IVL1 2488 aa1.62□□□□□ -2.15
LMBR1-218ENST00000486837 DMXL2Q8TDJ6 3036 aa1.62□□□□□ -2.15
LMBR1-218ENST00000486837 DNAH8Q96JB1 4490 aa1.62□□□□□ -2.15
LMBR1-218ENST00000486837 CSMD1Q96PZ7 3565 aa1.62□□□□□ -2.15
LMBR1-218ENST00000486837 LAMA1P25391 3075 aa1.61□□□□□ -2.15
LMBR1-218ENST00000486837 CELSR3Q9NYQ7 3312 aa1.61□□□□□ -2.15
LMBR1-218ENST00000486837 SRRM2Q9UQ35 2752 aaKnown RBP1.6□□□□□ -2.15
LMBR1-218ENST00000486837 DMBT1Q9UGM3 2413 aaPredicted RBP1.6□□□□□ -2.15
LMBR1-218ENST00000486837 MEGF8Q7Z7M0 2845 aa1.59□□□□□ -2.16
LMBR1-218ENST00000486837 WDFY3Q8IZQ1 3526 aa1.59□□□□□ -2.16
LMBR1-218ENST00000486837 DNAH17Q9UFH2 4485 aa1.59□□□□□ -2.16
LMBR1-218ENST00000486837 PTPN13Q12923 2485 aa1.59□□□□□ -2.16
LMBR1-218ENST00000486837 ANK3Q12955 4377 aaKnown RBP1.59□□□□□ -2.16
LMBR1-218ENST00000486837 LAMA3Q16787 3333 aa1.58□□□□□ -2.16
LMBR1-218ENST00000486837 SONP18583 2426 aaKnown RBP1.58□□□□□ -2.16
LMBR1-218ENST00000486837 ATMQ13315 3056 aa1.58□□□□□ -2.16
LMBR1-218ENST00000486837 FRAS1Q86XX4 4008 aa1.57□□□□□ -2.16
LMBR1-218ENST00000486837 LOC400499M0QZD8 3231 aa1.57□□□□□ -2.16
LMBR1-218ENST00000486837 SPTAN1Q13813 2472 aaKnown RBP1.57□□□□□ -2.16
LMBR1-218ENST00000486837 PKD1L2Q7Z442 2459 aa1.57□□□□□ -2.16
LMBR1-218ENST00000486837 CRCT1Q9UGL9 99 aa1.57□□□□□ -2.16
LMBR1-218ENST00000486837 TACC2O95359 2948 aa1.57□□□□□ -2.16
LMBR1-218ENST00000486837 VCANP13611 3396 aa1.57□□□□□ -2.16
LMBR1-218ENST00000486837 DNAH2Q9P225 4427 aa1.57□□□□□ -2.16
LMBR1-218ENST00000486837 SPENQ96T58 3664 aaKnown RBP1.56□□□□□ -2.16
LMBR1-218ENST00000486837 SMR3AQ99954 134 aa1.56□□□□□ -2.16
LMBR1-218ENST00000486837 APCP25054 2843 aa1.56□□□□□ -2.16
LMBR1-218ENST00000486837 LAMA5O15230 3695 aa1.55□□□□□ -2.16
LMBR1-218ENST00000486837 TNP1P09430 55 aa1.55□□□□□ -2.16
LMBR1-218ENST00000486837 DNAH10Q8IVF4 4471 aa1.55□□□□□ -2.16
LMBR1-218ENST00000486837 RELNP78509 3460 aa1.55□□□□□ -2.16
LMBR1-218ENST00000486837 CEP290O15078 2479 aa1.55□□□□□ -2.16
LMBR1-218ENST00000486837 TLN1Q9Y490 2541 aaKnown RBP1.55□□□□□ -2.16
LMBR1-218ENST00000486837 SETD2Q9BYW2 2564 aaPredicted RBP1.54□□□□□ -2.16
LMBR1-218ENST00000486837 TEX15Q9BXT5 2789 aa1.54□□□□□ -2.16
LMBR1-218ENST00000486837 DYNC2H1Q8NCM8 4307 aaKnown RBP1.54□□□□□ -2.16
LMBR1-218ENST00000486837 DNAH9Q9NYC9 4486 aa1.54□□□□□ -2.16
LMBR1-218ENST00000486837 TTC28Q96AY4 2481 aa1.54□□□□□ -2.16
LMBR1-218ENST00000486837 HUWE1Q7Z6Z7 4374 aaKnown RBP1.53□□□□□ -2.16
LMBR1-218ENST00000486837 HELZ2Q9BYK8 2649 aaKnown RBP1.53□□□□□ -2.16
LMBR1-218ENST00000486837 CDH23Q9H251 3354 aa1.53□□□□□ -2.17
LMBR1-218ENST00000486837 DCHS2Q6V1P9 2916 aa1.53□□□□□ -2.17
LMBR1-218ENST00000486837 NIPBLQ6KC79 2804 aaeCLIP1.52□□□□□ -2.17
LMBR1-218ENST00000486837 BRCA2P51587 3418 aa1.52□□□□□ -2.17
LMBR1-218ENST00000486837 SETXQ7Z333 2677 aaKnown RBP1.51□□□□□ -2.17
LMBR1-218ENST00000486837 USP9XQ93008 2570 aaPredicted RBP1.51□□□□□ -2.17
LMBR1-218ENST00000486837 SACSQ9NZJ4 4579 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms