RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 KRTAP13-1Q8IUC0 172 aa2.18□□□□□ -2.06
COMMD6-210ENST00000483290 DNAH14Q0VDD8 3507 aa2.18□□□□□ -2.06
COMMD6-210ENST00000483290 ZNF292O60281 2723 aa2.18□□□□□ -2.06
COMMD6-210ENST00000483290 ZFHX4Q86UP3 3567 aa2.18□□□□□ -2.06
COMMD6-210ENST00000483290 ACACBO00763 2458 aa2.17□□□□□ -2.06
COMMD6-210ENST00000483290 FASNP49327 2511 aaKnown RBP2.17□□□□□ -2.06
COMMD6-210ENST00000483290 GCN1Q92616 2671 aaKnown RBP2.17□□□□□ -2.06
COMMD6-210ENST00000483290 CSPG4Q6UVK1 2322 aa2.17□□□□□ -2.06
COMMD6-210ENST00000483290 DEFB133Q30KQ1 61 aa2.16□□□□□ -2.06
COMMD6-210ENST00000483290 LINC01556Q5JQF7 62 aa2.16□□□□□ -2.06
COMMD6-210ENST00000483290 FRYLO94915 3013 aa2.16□□□□□ -2.06
COMMD6-210ENST00000483290 USP24Q9UPU5 2620 aa2.16□□□□□ -2.06
COMMD6-210ENST00000483290 H3BNG1 76 aa2.15□□□□□ -2.07
COMMD6-210ENST00000483290 TNP1P09430 55 aa2.15□□□□□ -2.07
COMMD6-210ENST00000483290 CACNA1HO95180 2353 aa2.15□□□□□ -2.07
COMMD6-210ENST00000483290 DSPP15924 2871 aaKnown RBP2.15□□□□□ -2.07
COMMD6-210ENST00000483290 ASPMQ8IZT6 3477 aa2.15□□□□□ -2.07
COMMD6-210ENST00000483290 NBEAQ8NFP9 2946 aa2.14□□□□□ -2.07
COMMD6-210ENST00000483290 NAV2Q8IVL1 2488 aa2.14□□□□□ -2.07
COMMD6-210ENST00000483290 ACACAQ13085 2346 aa2.14□□□□□ -2.07
COMMD6-210ENST00000483290 SPTA1P02549 2419 aa2.13□□□□□ -2.07
COMMD6-210ENST00000483290 GVINP1Q7Z2Y8 2422 aa2.13□□□□□ -2.07
COMMD6-210ENST00000483290 ABCA2Q9BZC7 2435 aa2.13□□□□□ -2.07
COMMD6-210ENST00000483290 ASH1LQ9NR48 2969 aaKnown RBP2.13□□□□□ -2.07
COMMD6-210ENST00000483290 NCOR2Q9Y618 2525 aa2.13□□□□□ -2.07
COMMD6-210ENST00000483290 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
COMMD6-210ENST00000483290 DEFB135Q30KP9 77 aa2.13□□□□□ -2.07
COMMD6-210ENST00000483290 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
COMMD6-210ENST00000483290 CEP250Q9BV73 2442 aa2.13□□□□□ -2.07
COMMD6-210ENST00000483290 SPTBN2O15020 2390 aa2.13□□□□□ -2.07
COMMD6-210ENST00000483290 FRYQ5TBA9 3013 aa2.12□□□□□ -2.07
COMMD6-210ENST00000483290 EP300Q09472 2414 aaPredicted RBP2.12□□□□□ -2.07
COMMD6-210ENST00000483290 MAST4O15021 2626 aa2.12□□□□□ -2.07
COMMD6-210ENST00000483290 FLNBO75369 2602 aaKnown RBP2.12□□□□□ -2.07
COMMD6-210ENST00000483290 UNC79Q9P2D8 2635 aa2.12□□□□□ -2.07
COMMD6-210ENST00000483290 F8P00451 2351 aa2.11□□□□□ -2.07
COMMD6-210ENST00000483290 MGAQ8IWI9 3026 aa2.1□□□□□ -2.07
COMMD6-210ENST00000483290 ZZEF1O43149 2961 aa2.09□□□□□ -2.07
COMMD6-210ENST00000483290 WDFY3Q8IZQ1 3526 aa2.09□□□□□ -2.07
COMMD6-210ENST00000483290 J3QKU1 62 aa2.09□□□□□ -2.07
COMMD6-210ENST00000483290 SPEGQ15772 3267 aa2.09□□□□□ -2.08
COMMD6-210ENST00000483290 HELZ2Q9BYK8 2649 aaKnown RBP2.08□□□□□ -2.08
COMMD6-210ENST00000483290 ZFYVE26Q68DK2 2539 aa2.08□□□□□ -2.08
COMMD6-210ENST00000483290 TENM4Q6N022 2769 aa2.08□□□□□ -2.08
COMMD6-210ENST00000483290 CELSR2Q9HCU4 2923 aa2.07□□□□□ -2.08
COMMD6-210ENST00000483290 USP9XQ93008 2570 aaPredicted RBP2.07□□□□□ -2.08
COMMD6-210ENST00000483290 TENM2Q9NT68 2774 aa2.07□□□□□ -2.08
COMMD6-210ENST00000483290 KRTAP6-3Q3LI67 103 aa2.07□□□□□ -2.08
COMMD6-210ENST00000483290 IGSF10Q6WRI0 2623 aa2.07□□□□□ -2.08
COMMD6-210ENST00000483290 ITPR1Q14643 2758 aa2.07□□□□□ -2.08
COMMD6-210ENST00000483290 C2CD3Q4AC94 2353 aa2.07□□□□□ -2.08
COMMD6-210ENST00000483290 TEP1Q99973 2627 aaKnown RBP2.06□□□□□ -2.08
COMMD6-210ENST00000483290 DMXL2Q8TDJ6 3036 aa2.06□□□□□ -2.08
COMMD6-210ENST00000483290 HTN3P15516 51 aa2.06□□□□□ -2.08
COMMD6-210ENST00000483290 MYO18BQ8IUG5 2567 aa2.06□□□□□ -2.08
COMMD6-210ENST00000483290 AKAP13Q12802 2813 aa2.06□□□□□ -2.08
COMMD6-210ENST00000483290 LOC400499M0QZD8 3231 aa2.06□□□□□ -2.08
COMMD6-210ENST00000483290 SMG1Q96Q15 3661 aaKnown RBP2.05□□□□□ -2.08
COMMD6-210ENST00000483290 DOPEY1Q5JWR5 2465 aa2.05□□□□□ -2.08
COMMD6-210ENST00000483290 CEP295Q9C0D2 2601 aa2.04□□□□□ -2.08
COMMD6-210ENST00000483290 LAMA5O15230 3695 aa2.04□□□□□ -2.08
COMMD6-210ENST00000483290 LAMA1P25391 3075 aa2.04□□□□□ -2.08
COMMD6-210ENST00000483290 FREM2Q5SZK8 3169 aa2.04□□□□□ -2.08
COMMD6-210ENST00000483290 TEX15Q9BXT5 2789 aa2.03□□□□□ -2.09
COMMD6-210ENST00000483290 HECTD1Q9ULT8 2610 aa2.02□□□□□ -2.09
COMMD6-210ENST00000483290 KALRNO60229 2985 aa2.01□□□□□ -2.09
COMMD6-210ENST00000483290 OTOGQ6ZRI0 2925 aa2.01□□□□□ -2.09
COMMD6-210ENST00000483290 C9orf92A6NGG3 77 aa2.01□□□□□ -2.09
COMMD6-210ENST00000483290 CFAP46Q8IYW2 2715 aa2.01□□□□□ -2.09
COMMD6-210ENST00000483290 PTPN13Q12923 2485 aa2□□□□□ -2.09
COMMD6-210ENST00000483290 COL12A1Q99715 3063 aa2□□□□□ -2.09
COMMD6-210ENST00000483290 ITPR3Q14573 2671 aa2□□□□□ -2.09
COMMD6-210ENST00000483290 M0R2T5 61 aa2□□□□□ -2.09
COMMD6-210ENST00000483290 MYO9AB2RTY4 2548 aa2□□□□□ -2.09
COMMD6-210ENST00000483290 CREBBPQ92793 2442 aa2□□□□□ -2.09
COMMD6-210ENST00000483290 NBPF19A0A087WUL8 3843 aa2□□□□□ -2.09
COMMD6-210ENST00000483290 SPTAN1Q13813 2472 aaKnown RBP1.99□□□□□ -2.09
COMMD6-210ENST00000483290 RELNP78509 3460 aa1.99□□□□□ -2.09
COMMD6-210ENST00000483290 ABCA12Q86UK0 2595 aa1.99□□□□□ -2.09
COMMD6-210ENST00000483290 FBN1P35555 2871 aaKnown RBP1.99□□□□□ -2.09
COMMD6-210ENST00000483290 PRRC2CQ9Y520 2896 aaKnown RBP1.99□□□□□ -2.09
COMMD6-210ENST00000483290 UTP20O75691 2785 aaKnown RBP1.98□□□□□ -2.09
COMMD6-210ENST00000483290 ATMQ13315 3056 aa1.98□□□□□ -2.09
COMMD6-210ENST00000483290 VPS13DQ5THJ4 4388 aa1.98□□□□□ -2.09
COMMD6-210ENST00000483290 FBN2P35556 2912 aa1.97□□□□□ -2.09
COMMD6-210ENST00000483290 CCDC168Q8NDH2 2452 aa1.97□□□□□ -2.09
COMMD6-210ENST00000483290 COL6A5A8TX70 2615 aa1.97□□□□□ -2.09
COMMD6-210ENST00000483290 CRYBG3Q68DQ2 2970 aa1.97□□□□□ -2.09
COMMD6-210ENST00000483290 CELSR3Q9NYQ7 3312 aa1.96□□□□□ -2.1
COMMD6-210ENST00000483290 APC2O95996 2303 aa1.96□□□□□ -2.1
COMMD6-210ENST00000483290 RPS29P62273 56 aaKnown RBP1.96□□□□□ -2.1
COMMD6-210ENST00000483290 UBR5O95071 2799 aaPredicted RBP1.96□□□□□ -2.1
COMMD6-210ENST00000483290 POLQO75417 2590 aa1.95□□□□□ -2.1
COMMD6-210ENST00000483290 KRTAP21-3Q3LHN1 58 aa1.95□□□□□ -2.1
COMMD6-210ENST00000483290 ITPR2Q14571 2701 aa1.95□□□□□ -2.1
COMMD6-210ENST00000483290 FLNCQ14315 2725 aa1.94□□□□□ -2.1
COMMD6-210ENST00000483290 LRBAP50851 2863 aa1.93□□□□□ -2.1
COMMD6-210ENST00000483290 MYCBP2O75592 4640 aa1.93□□□□□ -2.1
COMMD6-210ENST00000483290 CENPEQ02224 2701 aa1.93□□□□□ -2.1
COMMD6-210ENST00000483290 SETD2Q9BYW2 2564 aaPredicted RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 816 ms