RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 FBN3Q75N90 2809 aa7.61□□□□□ -1.19
VPS52-218ENST00000482399 ZNF861PO60384 105 aa7.61□□□□□ -1.19
VPS52-218ENST00000482399 NUPR2A6NF83 97 aa7.6□□□□□ -1.19
VPS52-218ENST00000482399 CDC42SE1Q9NRR8 79 aa7.6□□□□□ -1.19
VPS52-218ENST00000482399 Q5W150 140 aa7.6□□□□□ -1.19
VPS52-218ENST00000482399 SPACA4Q8TDM5 124 aa7.6□□□□□ -1.19
VPS52-218ENST00000482399 Q96NJ1 140 aa7.6□□□□□ -1.19
VPS52-218ENST00000482399 WWC2-AS2Q96NR7 200 aa7.59□□□□□ -1.19
VPS52-218ENST00000482399 ACYP2P14621 99 aa7.58□□□□□ -1.2
VPS52-218ENST00000482399 PRAC1Q96KF2 57 aa7.58□□□□□ -1.2
VPS52-218ENST00000482399 A0A1B0GU69 56 aa7.57□□□□□ -1.2
VPS52-218ENST00000482399 LINC01558Q9Y6Z2 57 aa7.57□□□□□ -1.2
VPS52-218ENST00000482399 LYSTQ99698 3801 aa7.56□□□□□ -1.2
VPS52-218ENST00000482399 LINC00313P59037 77 aa7.55□□□□□ -1.2
VPS52-218ENST00000482399 KRTAP13-1Q8IUC0 172 aa7.53□□□□□ -1.2
VPS52-218ENST00000482399 Q6ZR54 194 aa7.52□□□□□ -1.21
VPS52-218ENST00000482399 C1orf134Q5TEV5 83 aa7.52□□□□□ -1.21
VPS52-218ENST00000482399 C7orf65Q6ZTY9 151 aa7.51□□□□□ -1.21
VPS52-218ENST00000482399 IGLV7-43P04211 117 aa7.49□□□□□ -1.21
VPS52-218ENST00000482399 DMBT1Q9UGM3 2413 aaPredicted RBP7.49□□□□□ -1.21
VPS52-218ENST00000482399 Q6ZRN7 208 aaPredicted RBP7.49□□□□□ -1.21
VPS52-218ENST00000482399 HUWE1Q7Z6Z7 4374 aaKnown RBP7.49□□□□□ -1.21
VPS52-218ENST00000482399 C8orf87E5RJ46 101 aa7.48□□□□□ -1.21
VPS52-218ENST00000482399 ADM2Q7Z4H4 148 aa7.47□□□□□ -1.21
VPS52-218ENST00000482399 MEGF8Q7Z7M0 2845 aa7.47□□□□□ -1.21
VPS52-218ENST00000482399 A6NN06 94 aa7.46□□□□□ -1.21
VPS52-218ENST00000482399 FLG2Q5D862 2391 aaPredicted RBP7.46□□□□□ -1.22
VPS52-218ENST00000482399 FAM229AH3BQW9 127 aa7.45□□□□□ -1.22
VPS52-218ENST00000482399 LINC00483Q53H64 154 aa7.45□□□□□ -1.22
VPS52-218ENST00000482399 Q8N1X5 172 aa7.42□□□□□ -1.22
VPS52-218ENST00000482399 MIR22HGQ0VDD5 57 aa7.4□□□□□ -1.22
VPS52-218ENST00000482399 PLAC8Q9NZF1 115 aa7.4□□□□□ -1.22
VPS52-218ENST00000482399 DNAH9Q9NYC9 4486 aa7.4□□□□□ -1.22
VPS52-218ENST00000482399 ASB16-AS1Q495Z4 193 aa7.39□□□□□ -1.23
VPS52-218ENST00000482399 SSBP3-AS1Q7Z2R9 100 aa7.38□□□□□ -1.23
VPS52-218ENST00000482399 UQCR11O14957 56 aa7.38□□□□□ -1.23
VPS52-218ENST00000482399 PLA2G1BP04054 148 aaKnown RBP7.35□□□□□ -1.23
VPS52-218ENST00000482399 KRTAP10-2P60368 255 aa7.35□□□□□ -1.23
VPS52-218ENST00000482399 DMAC1Q96GE9 116 aa7.32□□□□□ -1.24
VPS52-218ENST00000482399 TYMSOSQ8TAI1 123 aa7.32□□□□□ -1.24
VPS52-218ENST00000482399 PLECQ15149 4684 aaKnown RBP7.31□□□□□ -1.24
VPS52-218ENST00000482399 C9orf92A6NGG3 77 aa7.3□□□□□ -1.24
VPS52-218ENST00000482399 DNAH7Q8WXX0 4024 aa7.27□□□□□ -1.25
VPS52-218ENST00000482399 KRTAP13-2Q52LG2 175 aa7.26□□□□□ -1.25
VPS52-218ENST00000482399 SMR3BP02814 79 aaPredicted RBP7.26□□□□□ -1.25
VPS52-218ENST00000482399 FRAS1Q86XX4 4008 aa7.25□□□□□ -1.25
VPS52-218ENST00000482399 CSAG1Q6PB30 78 aa7.24□□□□□ -1.25
VPS52-218ENST00000482399 KRTAP10-1P60331 282 aa7.22□□□□□ -1.25
VPS52-218ENST00000482399 LINC01554Q52M75 96 aa7.22□□□□□ -1.25
VPS52-218ENST00000482399 CMYA5Q8N3K9 4069 aa7.22□□□□□ -1.25
VPS52-218ENST00000482399 DNAH1Q9P2D7 4330 aa7.22□□□□□ -1.25
VPS52-218ENST00000482399 KRTAP13-3Q3SY46 172 aa7.21□□□□□ -1.25
VPS52-218ENST00000482399 CRIPTQ9P021 101 aa7.18□□□□□ -1.26
VPS52-218ENST00000482399 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
VPS52-218ENST00000482399 DNAH8Q96JB1 4490 aa7.15□□□□□ -1.27
VPS52-218ENST00000482399 LINC00304Q8N9R0 145 aa7.14□□□□□ -1.27
VPS52-218ENST00000482399 KMT2AQ03164 3969 aa7.13□□□□□ -1.27
VPS52-218ENST00000482399 STARD9Q9P2P6 4700 aa7.13□□□□□ -1.27
VPS52-218ENST00000482399 DNAH3Q8TD57 4116 aa7.08□□□□□ -1.28
VPS52-218ENST00000482399 DNAH11Q96DT5 4516 aa7.08□□□□□ -1.28
VPS52-218ENST00000482399 KRTAP16-1A8MUX0 517 aa7.07□□□□□ -1.28
VPS52-218ENST00000482399 K7ERS5 55 aa7.07□□□□□ -1.28
VPS52-218ENST00000482399 A0A1B0GU33 70 aa7.06□□□□□ -1.28
VPS52-218ENST00000482399 DNAH17Q9UFH2 4485 aa7.05□□□□□ -1.28
VPS52-218ENST00000482399 KRTAP1-4P0C5Y4 121 aa7.04□□□□□ -1.28
VPS52-218ENST00000482399 A0A0D9SG42 100 aa7.02□□□□□ -1.29
VPS52-218ENST00000482399 PRKDCP78527 4128 aaKnown RBP7.02□□□□□ -1.29
VPS52-218ENST00000482399 Q6ZSA8 131 aa6.98□□□□□ -1.29
VPS52-218ENST00000482399 DNAH6Q9C0G6 4158 aa6.97□□□□□ -1.29
VPS52-218ENST00000482399 LRP1BQ9NZR2 4599 aa6.96□□□□□ -1.29
VPS52-218ENST00000482399 VPS13DQ5THJ4 4388 aa6.96□□□□□ -1.3
VPS52-218ENST00000482399 DNAH2Q9P225 4427 aa6.95□□□□□ -1.3
VPS52-218ENST00000482399 H0YAA0 97 aa6.94□□□□□ -1.3
VPS52-218ENST00000482399 HECTD4Q9Y4D8 3996 aa6.94□□□□□ -1.3
VPS52-218ENST00000482399 H1FX-AS1Q4G0G2 97 aa6.9□□□□□ -1.31
VPS52-218ENST00000482399 SPINT4Q6UDR6 99 aa6.84□□□□□ -1.31
VPS52-218ENST00000482399 DNHD1Q96M86 4753 aa6.83□□□□□ -1.32
VPS52-218ENST00000482399 KRTAP25-1Q3LHN0 102 aa6.83□□□□□ -1.32
VPS52-218ENST00000482399 A8MUU9 505 aa6.82□□□□□ -1.32
VPS52-218ENST00000482399 COX6B2Q6YFQ2 88 aa6.81□□□□□ -1.32
VPS52-218ENST00000482399 KRTAP3-1Q9BYR8 98 aa6.79□□□□□ -1.32
VPS52-218ENST00000482399 VPS13BQ7Z7G8 4022 aa6.78□□□□□ -1.32
VPS52-218ENST00000482399 DNAH5Q8TE73 4624 aa6.77□□□□□ -1.32
VPS52-218ENST00000482399 FAT1Q14517 4588 aa6.77□□□□□ -1.33
VPS52-218ENST00000482399 ALMS1Q8TCU4 4167 aa6.76□□□□□ -1.33
VPS52-218ENST00000482399 ROMO1P60602 79 aa6.74□□□□□ -1.33
VPS52-218ENST00000482399 C20orf166-AS1Q96NR2 134 aa6.74□□□□□ -1.33
VPS52-218ENST00000482399 DYNC2H1Q8NCM8 4307 aaKnown RBP6.74□□□□□ -1.33
VPS52-218ENST00000482399 RPL37P61927 97 aaKnown RBP6.71□□□□□ -1.34
VPS52-218ENST00000482399 HYDINQ4G0P3 5121 aa6.69□□□□□ -1.34
VPS52-218ENST00000482399 C10orf95Q9H7T3 257 aa6.68□□□□□ -1.34
VPS52-218ENST00000482399 RPS29P62273 56 aaKnown RBP6.65□□□□□ -1.35
VPS52-218ENST00000482399 S4R3F8 94 aa6.65□□□□□ -1.35
VPS52-218ENST00000482399 P0C880 135 aa6.64□□□□□ -1.35
VPS52-218ENST00000482399 MYCBP2O75592 4640 aa6.64□□□□□ -1.35
VPS52-218ENST00000482399 PKHD1P08F94 4074 aa6.63□□□□□ -1.35
VPS52-218ENST00000482399 FAT2Q9NYQ8 4349 aa6.61□□□□□ -1.35
VPS52-218ENST00000482399 NDUFAF8A1L188 74 aa6.59□□□□□ -1.35
VPS52-218ENST00000482399 KRTAP13-4Q3LI77 160 aa6.56□□□□□ -1.36
VPS52-218ENST00000482399 A0A0A0MQY5 61 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms