RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 C14orf177Q52M58 125 aa8.06□□□□□ -1.12
HDAC1-206ENST00000476391 MAST4O15021 2626 aa8.05□□□□□ -1.12
HDAC1-206ENST00000476391 A8MUU9 505 aa8.03□□□□□ -1.12
HDAC1-206ENST00000476391 TEP1Q99973 2627 aaKnown RBP8.02□□□□□ -1.12
HDAC1-206ENST00000476391 SPINK6Q6UWN8 80 aa8.02□□□□□ -1.13
HDAC1-206ENST00000476391 TENM3Q9P273 2699 aa8.01□□□□□ -1.13
HDAC1-206ENST00000476391 KRTAP10-11P60412 298 aa8□□□□□ -1.13
HDAC1-206ENST00000476391 IGLV5-52A0A0A0MRZ9 124 aa7.99□□□□□ -1.13
HDAC1-206ENST00000476391 INAFM1C9JVW0 142 aa7.99□□□□□ -1.13
HDAC1-206ENST00000476391 KRTAP1-5Q9BYS1 174 aa7.98□□□□□ -1.13
HDAC1-206ENST00000476391 FBN1P35555 2871 aaKnown RBP7.97□□□□□ -1.13
HDAC1-206ENST00000476391 TENM1Q9UKZ4 2725 aa7.96□□□□□ -1.14
HDAC1-206ENST00000476391 LY6G6CO95867 125 aa7.96□□□□□ -1.14
HDAC1-206ENST00000476391 LINC00304Q8N9R0 145 aa7.95□□□□□ -1.14
HDAC1-206ENST00000476391 DNAH10Q8IVF4 4471 aa7.95□□□□□ -1.14
HDAC1-206ENST00000476391 ANK2Q01484 3957 aa7.94□□□□□ -1.14
HDAC1-206ENST00000476391 NSD1Q96L73 2696 aaPredicted RBP7.93□□□□□ -1.14
HDAC1-206ENST00000476391 IGKV2D-30A0A075B6S6 120 aa7.92□□□□□ -1.14
HDAC1-206ENST00000476391 PANO1I0J062 215 aa7.92□□□□□ -1.14
HDAC1-206ENST00000476391 H0YAA0 97 aa7.9□□□□□ -1.15
HDAC1-206ENST00000476391 LYSTQ99698 3801 aa7.89□□□□□ -1.15
HDAC1-206ENST00000476391 P0C880 135 aa7.89□□□□□ -1.15
HDAC1-206ENST00000476391 ANAPC11Q9NYG5 84 aa7.89□□□□□ -1.15
HDAC1-206ENST00000476391 Q6ZSA8 131 aa7.88□□□□□ -1.15
HDAC1-206ENST00000476391 ATRQ13535 2644 aa7.87□□□□□ -1.15
HDAC1-206ENST00000476391 SPACA4Q8TDM5 124 aa7.87□□□□□ -1.15
HDAC1-206ENST00000476391 COL7A1Q02388 2944 aa7.86□□□□□ -1.15
HDAC1-206ENST00000476391 PSORS1C2Q9UIG4 136 aa7.83□□□□□ -1.16
HDAC1-206ENST00000476391 CIRBP-AS1Q8TBR5 109 aa7.82□□□□□ -1.16
HDAC1-206ENST00000476391 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.82□□□□□ -1.16
HDAC1-206ENST00000476391 DNAH9Q9NYC9 4486 aa7.82□□□□□ -1.16
HDAC1-206ENST00000476391 SPINK1P00995 79 aa7.81□□□□□ -1.16
HDAC1-206ENST00000476391 KRTAP16-1A8MUX0 517 aa7.8□□□□□ -1.16
HDAC1-206ENST00000476391 SSBP3-AS1Q7Z2R9 100 aa7.79□□□□□ -1.16
HDAC1-206ENST00000476391 UBE2DNLQ8IWF7 75 aa7.78□□□□□ -1.16
HDAC1-206ENST00000476391 A0A1B0GU33 70 aa7.77□□□□□ -1.17
HDAC1-206ENST00000476391 NBEAL1Q6ZS30 2694 aa7.74□□□□□ -1.17
HDAC1-206ENST00000476391 DNAH8Q96JB1 4490 aa7.74□□□□□ -1.17
HDAC1-206ENST00000476391 A0A0A0MQY5 61 aa7.73□□□□□ -1.17
HDAC1-206ENST00000476391 K7ERS5 55 aa7.73□□□□□ -1.17
HDAC1-206ENST00000476391 KRTAP24-1Q3LI83 254 aa7.73□□□□□ -1.17
HDAC1-206ENST00000476391 H1FX-AS1Q4G0G2 97 aa7.72□□□□□ -1.17
HDAC1-206ENST00000476391 FRAS1Q86XX4 4008 aa7.7□□□□□ -1.18
HDAC1-206ENST00000476391 TYMSOSQ8TAI1 123 aa7.7□□□□□ -1.18
HDAC1-206ENST00000476391 Q6ZRN7 208 aaPredicted RBP7.69□□□□□ -1.18
HDAC1-206ENST00000476391 Q8N1X5 172 aa7.69□□□□□ -1.18
HDAC1-206ENST00000476391 CRIPTQ9P021 101 aa7.69□□□□□ -1.18
HDAC1-206ENST00000476391 COL6A5A8TX70 2615 aa7.68□□□□□ -1.18
HDAC1-206ENST00000476391 MEGF8Q7Z7M0 2845 aa7.67□□□□□ -1.18
HDAC1-206ENST00000476391 APLNQ9ULZ1 77 aa7.67□□□□□ -1.18
HDAC1-206ENST00000476391 DNAH3Q8TD57 4116 aa7.67□□□□□ -1.18
HDAC1-206ENST00000476391 STAB1Q9NY15 2570 aa7.67□□□□□ -1.18
HDAC1-206ENST00000476391 HUWE1Q7Z6Z7 4374 aaKnown RBP7.66□□□□□ -1.18
HDAC1-206ENST00000476391 FLG2Q5D862 2391 aaPredicted RBP7.66□□□□□ -1.18
HDAC1-206ENST00000476391 NBDYA0A0U1RRE5 68 aa7.65□□□□□ -1.18
HDAC1-206ENST00000476391 NUPR2A6NF83 97 aa7.65□□□□□ -1.18
HDAC1-206ENST00000476391 CMYA5Q8N3K9 4069 aa7.64□□□□□ -1.19
HDAC1-206ENST00000476391 SPINT4Q6UDR6 99 aa7.63□□□□□ -1.19
HDAC1-206ENST00000476391 NOTCH1P46531 2555 aa7.63□□□□□ -1.19
HDAC1-206ENST00000476391 A0A087WTM6 91 aa7.62□□□□□ -1.19
HDAC1-206ENST00000476391 C20orf166-AS1Q96NR2 134 aa7.6□□□□□ -1.19
HDAC1-206ENST00000476391 NDUFAF8A1L188 74 aa7.57□□□□□ -1.2
HDAC1-206ENST00000476391 DNAH17Q9UFH2 4485 aa7.55□□□□□ -1.2
HDAC1-206ENST00000476391 KRTAP15-1Q3LI76 137 aa7.54□□□□□ -1.2
HDAC1-206ENST00000476391 TGP01266 2768 aa7.54□□□□□ -1.2
HDAC1-206ENST00000476391 COX6B2Q6YFQ2 88 aa7.52□□□□□ -1.21
HDAC1-206ENST00000476391 KRTAP13-2Q52LG2 175 aa7.51□□□□□ -1.21
HDAC1-206ENST00000476391 TPRXLQ17RH7 258 aa7.5□□□□□ -1.21
HDAC1-206ENST00000476391 DNAH7Q8WXX0 4024 aa7.49□□□□□ -1.21
HDAC1-206ENST00000476391 DNHD1Q96M86 4753 aa7.49□□□□□ -1.21
HDAC1-206ENST00000476391 HECTD4Q9Y4D8 3996 aa7.47□□□□□ -1.21
HDAC1-206ENST00000476391 DYNC2H1Q8NCM8 4307 aaKnown RBP7.47□□□□□ -1.21
HDAC1-206ENST00000476391 RPL37P61927 97 aaKnown RBP7.47□□□□□ -1.21
HDAC1-206ENST00000476391 VPS13DQ5THJ4 4388 aa7.47□□□□□ -1.21
HDAC1-206ENST00000476391 KRTAP3-1Q9BYR8 98 aa7.45□□□□□ -1.22
HDAC1-206ENST00000476391 STAB2Q8WWQ8 2551 aa7.42□□□□□ -1.22
HDAC1-206ENST00000476391 MGAM2Q2M2H8 2515 aa7.42□□□□□ -1.22
HDAC1-206ENST00000476391 PLECQ15149 4684 aaKnown RBP7.37□□□□□ -1.23
HDAC1-206ENST00000476391 C10orf95Q9H7T3 257 aa7.34□□□□□ -1.23
HDAC1-206ENST00000476391 KRTAP1-4P0C5Y4 121 aa7.31□□□□□ -1.24
HDAC1-206ENST00000476391 PRKDCP78527 4128 aaKnown RBP7.29□□□□□ -1.24
HDAC1-206ENST00000476391 KMT2AQ03164 3969 aa7.28□□□□□ -1.24
HDAC1-206ENST00000476391 KRTAP10-6P60371 365 aaPredicted RBP7.26□□□□□ -1.25
HDAC1-206ENST00000476391 KRTAP3-3Q9BYR6 98 aa7.26□□□□□ -1.25
HDAC1-206ENST00000476391 KRTAP3-2Q9BYR7 98 aa7.26□□□□□ -1.25
HDAC1-206ENST00000476391 KRTAP21-3Q3LHN1 58 aa7.25□□□□□ -1.25
HDAC1-206ENST00000476391 KRTAP13-4Q3LI77 160 aa7.25□□□□□ -1.25
HDAC1-206ENST00000476391 DNAH11Q96DT5 4516 aa7.25□□□□□ -1.25
HDAC1-206ENST00000476391 A0A0D9SG42 100 aa7.24□□□□□ -1.25
HDAC1-206ENST00000476391 RPS29P62273 56 aaKnown RBP7.24□□□□□ -1.25
HDAC1-206ENST00000476391 DNAH2Q9P225 4427 aa7.23□□□□□ -1.25
HDAC1-206ENST00000476391 FBN3Q75N90 2809 aa7.19□□□□□ -1.26
HDAC1-206ENST00000476391 DNAH6Q9C0G6 4158 aa7.19□□□□□ -1.26
HDAC1-206ENST00000476391 S4R3F8 94 aa7.18□□□□□ -1.26
HDAC1-206ENST00000476391 LUZP6Q538Z0 58 aa7.16□□□□□ -1.26
HDAC1-206ENST00000476391 C9orf92A6NGG3 77 aa7.12□□□□□ -1.27
HDAC1-206ENST00000476391 STARD9Q9P2P6 4700 aa7.12□□□□□ -1.27
HDAC1-206ENST00000476391 XP32Q5T750 250 aa7.11□□□□□ -1.27
HDAC1-206ENST00000476391 SEC61BP60468 96 aaKnown RBP7.1□□□□□ -1.27
HDAC1-206ENST00000476391 DMBT1Q9UGM3 2413 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms