RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 CRIPTQ9P021 101 aa7.19□□□□□ -1.26
IRF1-208ENST00000472045 CAMK2N1Q7Z7J9 78 aa7.18□□□□□ -1.26
IRF1-208ENST00000472045 SMG1Q96Q15 3661 aaKnown RBP7.16□□□□□ -1.26
IRF1-208ENST00000472045 KRTAP11-1Q8IUC1 163 aa7.16□□□□□ -1.26
IRF1-208ENST00000472045 ZFHX4Q86UP3 3567 aa7.14□□□□□ -1.27
IRF1-208ENST00000472045 DMBT1Q9UGM3 2413 aaPredicted RBP7.13□□□□□ -1.27
IRF1-208ENST00000472045 RPS29P62273 56 aaKnown RBP7.11□□□□□ -1.27
IRF1-208ENST00000472045 A0A1B0GU33 70 aa7.1□□□□□ -1.27
IRF1-208ENST00000472045 CDC42SE1Q9NRR8 79 aa7.09□□□□□ -1.27
IRF1-208ENST00000472045 KRTAP7-1Q8IUC3 87 aa7.09□□□□□ -1.28
IRF1-208ENST00000472045 KTN1-AS1Q86SY8 53 aa7.07□□□□□ -1.28
IRF1-208ENST00000472045 R4GN34 69 aa7.07□□□□□ -1.28
IRF1-208ENST00000472045 ZFHX3Q15911 3703 aa7.07□□□□□ -1.28
IRF1-208ENST00000472045 OTOGQ6ZRI0 2925 aa7.06□□□□□ -1.28
IRF1-208ENST00000472045 PDZD2O15018 2839 aa7.06□□□□□ -1.28
IRF1-208ENST00000472045 KRTAP13-2Q52LG2 175 aa7.05□□□□□ -1.28
IRF1-208ENST00000472045 NBPF19A0A087WUL8 3843 aa7.05□□□□□ -1.28
IRF1-208ENST00000472045 ASB16-AS1Q495Z4 193 aa7.03□□□□□ -1.28
IRF1-208ENST00000472045 Q1T7F1 81 aa7.02□□□□□ -1.29
IRF1-208ENST00000472045 KRTAP13-1Q8IUC0 172 aa7.02□□□□□ -1.29
IRF1-208ENST00000472045 LCA10Q71F78 164 aa7.02□□□□□ -1.29
IRF1-208ENST00000472045 PKD1L1Q8TDX9 2849 aa7.02□□□□□ -1.29
IRF1-208ENST00000472045 FLG2Q5D862 2391 aaPredicted RBP7.01□□□□□ -1.29
IRF1-208ENST00000472045 TENM1Q9UKZ4 2725 aa7□□□□□ -1.29
IRF1-208ENST00000472045 CELSR1Q9NYQ6 3014 aa6.99□□□□□ -1.29
IRF1-208ENST00000472045 DMAC1Q96GE9 116 aa6.97□□□□□ -1.29
IRF1-208ENST00000472045 FBN1P35555 2871 aaKnown RBP6.97□□□□□ -1.29
IRF1-208ENST00000472045 Q5XG85 94 aa6.95□□□□□ -1.3
IRF1-208ENST00000472045 NOTCH2NLQ7Z3S9 236 aa6.95□□□□□ -1.3
IRF1-208ENST00000472045 Q75L30 129 aa6.94□□□□□ -1.3
IRF1-208ENST00000472045 TENM3Q9P273 2699 aa6.93□□□□□ -1.3
IRF1-208ENST00000472045 M0QZ58 72 aa6.93□□□□□ -1.3
IRF1-208ENST00000472045 KRTAP29-1A8MX34 341 aaPredicted RBP6.92□□□□□ -1.3
IRF1-208ENST00000472045 TENM2Q9NT68 2774 aa6.92□□□□□ -1.3
IRF1-208ENST00000472045 RPL37P61927 97 aaKnown RBP6.92□□□□□ -1.3
IRF1-208ENST00000472045 LINC01558Q9Y6Z2 57 aa6.9□□□□□ -1.3
IRF1-208ENST00000472045 H1FX-AS1Q4G0G2 97 aa6.9□□□□□ -1.31
IRF1-208ENST00000472045 CSMD1Q96PZ7 3565 aa6.89□□□□□ -1.31
IRF1-208ENST00000472045 CSMD2Q7Z408 3487 aa6.88□□□□□ -1.31
IRF1-208ENST00000472045 ADM2Q7Z4H4 148 aa6.87□□□□□ -1.31
IRF1-208ENST00000472045 PLAC4Q8WY50 150 aa6.87□□□□□ -1.31
IRF1-208ENST00000472045 VWFP04275 2813 aa6.83□□□□□ -1.32
IRF1-208ENST00000472045 TGP01266 2768 aa6.82□□□□□ -1.32
IRF1-208ENST00000472045 C20orf166-AS1Q96NR2 134 aa6.81□□□□□ -1.32
IRF1-208ENST00000472045 CYSTM1Q9H1C7 97 aa6.81□□□□□ -1.32
IRF1-208ENST00000472045 SPENQ96T58 3664 aaKnown RBP6.79□□□□□ -1.32
IRF1-208ENST00000472045 KRTAP1-4P0C5Y4 121 aa6.79□□□□□ -1.32
IRF1-208ENST00000472045 SVEP1Q4LDE5 3571 aa6.77□□□□□ -1.33
IRF1-208ENST00000472045 Q5VV11 94 aa6.73□□□□□ -1.33
IRF1-208ENST00000472045 A8MUU9 505 aa6.73□□□□□ -1.33
IRF1-208ENST00000472045 A0A1B0GVY2 172 aa6.71□□□□□ -1.33
IRF1-208ENST00000472045 CUBNO60494 3623 aa6.7□□□□□ -1.34
IRF1-208ENST00000472045 XP32Q5T750 250 aa6.7□□□□□ -1.34
IRF1-208ENST00000472045 LUZP6Q538Z0 58 aa6.69□□□□□ -1.34
IRF1-208ENST00000472045 SPATA8Q6RVD6 105 aa6.67□□□□□ -1.34
IRF1-208ENST00000472045 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
IRF1-208ENST00000472045 BSNQ9UPA5 3926 aa6.63□□□□□ -1.35
IRF1-208ENST00000472045 ROMO1P60602 79 aa6.6□□□□□ -1.35
IRF1-208ENST00000472045 PRAC1Q96KF2 57 aa6.59□□□□□ -1.35
IRF1-208ENST00000472045 SRRM2Q9UQ35 2752 aaKnown RBP6.57□□□□□ -1.36
IRF1-208ENST00000472045 KRTAP13-3Q3SY46 172 aa6.53□□□□□ -1.36
IRF1-208ENST00000472045 KRTAP10-8P60410 259 aa6.52□□□□□ -1.37
IRF1-208ENST00000472045 TRRAPQ9Y4A5 3859 aa6.52□□□□□ -1.37
IRF1-208ENST00000472045 ANK3Q12955 4377 aaKnown RBP6.5□□□□□ -1.37
IRF1-208ENST00000472045 A8MU10 97 aa6.46□□□□□ -1.38
IRF1-208ENST00000472045 FBN3Q75N90 2809 aa6.44□□□□□ -1.38
IRF1-208ENST00000472045 H3BS24 57 aa6.43□□□□□ -1.38
IRF1-208ENST00000472045 KRTAP10-10P60014 251 aa6.42□□□□□ -1.38
IRF1-208ENST00000472045 KRTAP16-1A8MUX0 517 aa6.39□□□□□ -1.39
IRF1-208ENST00000472045 A0A0A0MQY5 61 aa6.39□□□□□ -1.39
IRF1-208ENST00000472045 TNP1P09430 55 aa6.35□□□□□ -1.39
IRF1-208ENST00000472045 COL7A1Q02388 2944 aa6.34□□□□□ -1.39
IRF1-208ENST00000472045 A6NN06 94 aa6.33□□□□□ -1.4
IRF1-208ENST00000472045 ZNF469Q96JG9 3925 aaPredicted RBP6.26□□□□□ -1.41
IRF1-208ENST00000472045 VPS13CQ709C8 3753 aa6.25□□□□□ -1.41
IRF1-208ENST00000472045 KRTAP25-1Q3LHN0 102 aa6.23□□□□□ -1.41
IRF1-208ENST00000472045 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
IRF1-208ENST00000472045 MEGF8Q7Z7M0 2845 aa6.16□□□□□ -1.42
IRF1-208ENST00000472045 P0C880 135 aa6.11□□□□□ -1.43
IRF1-208ENST00000472045 MT1HL1P0DM35 61 aa6.07□□□□□ -1.44
IRF1-208ENST00000472045 AKAP9Q99996 3911 aa6.07□□□□□ -1.44
IRF1-208ENST00000472045 PP632Q6XCG6 107 aa6.05□□□□□ -1.44
IRF1-208ENST00000472045 H0YAA0 97 aa6.03□□□□□ -1.44
IRF1-208ENST00000472045 KRTAP4-5Q9BYR2 181 aa6.02□□□□□ -1.45
IRF1-208ENST00000472045 DNHD1Q96M86 4753 aa6.02□□□□□ -1.45
IRF1-208ENST00000472045 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
IRF1-208ENST00000472045 NDUFAF8A1L188 74 aa5.95□□□□□ -1.46
IRF1-208ENST00000472045 HUWE1Q7Z6Z7 4374 aaKnown RBP5.95□□□□□ -1.46
IRF1-208ENST00000472045 KRTAP10-4P60372 401 aaPredicted RBP5.92□□□□□ -1.46
IRF1-208ENST00000472045 KRTAP3-1Q9BYR8 98 aa5.84□□□□□ -1.47
IRF1-208ENST00000472045 ALMS1Q8TCU4 4167 aa5.83□□□□□ -1.48
IRF1-208ENST00000472045 CSMD3Q7Z407 3707 aa5.81□□□□□ -1.48
IRF1-208ENST00000472045 DNAH9Q9NYC9 4486 aa5.81□□□□□ -1.48
IRF1-208ENST00000472045 KRTAP12-2P59991 146 aa5.76□□□□□ -1.49
IRF1-208ENST00000472045 KRTAP12-1P59990 96 aa5.69□□□□□ -1.5
IRF1-208ENST00000472045 KRTAP13-4Q3LI77 160 aa5.69□□□□□ -1.5
IRF1-208ENST00000472045 PLECQ15149 4684 aaKnown RBP5.63□□□□□ -1.51
IRF1-208ENST00000472045 PRKDCP78527 4128 aaKnown RBP5.61□□□□□ -1.51
IRF1-208ENST00000472045 DNAH5Q8TE73 4624 aa5.6□□□□□ -1.51
IRF1-208ENST00000472045 KRTAP10-6P60371 365 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms