RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 DCAF8L2P0C7V8 631 aa22.37■■□□□ 1.17
IRF1-208ENST00000472045 NISCHQ9Y2I1 1504 aa21.95■■□□□ 1.1
IRF1-208ENST00000472045 SUPT5HO00267 1087 aaKnown RBP20.69■□□□□ 0.9
IRF1-208ENST00000472045 SHROOM4Q9ULL8 1493 aa20.63■□□□□ 0.89
IRF1-208ENST00000472045 EHMT2Q96KQ7 1210 aa19.89■□□□□ 0.77
IRF1-208ENST00000472045 FAM9AQ8IZU1 332 aaPredicted RBP19.68■□□□□ 0.74
IRF1-208ENST00000472045 APLP2Q06481 763 aa19.57■□□□□ 0.72
IRF1-208ENST00000472045 ABCC9O60706 1549 aa19.32■□□□□ 0.68
IRF1-208ENST00000472045 RANGAP1P46060 587 aaPredicted RBP19.26■□□□□ 0.67
IRF1-208ENST00000472045 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
IRF1-208ENST00000472045 ATP1B4Q9UN42 357 aaPredicted RBP19.15■□□□□ 0.66
IRF1-208ENST00000472045 TTBK1Q5TCY1 1321 aaPredicted RBP19.1■□□□□ 0.65
IRF1-208ENST00000472045 UBTFP17480 764 aaKnown RBP19.04■□□□□ 0.64
IRF1-208ENST00000472045 PABPN1Q86U42 306 aaKnown RBP eCLIP19.03■□□□□ 0.64
IRF1-208ENST00000472045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
IRF1-208ENST00000472045 HNRNPUL2Q1KMD3 747 aaKnown RBP18.68■□□□□ 0.58
IRF1-208ENST00000472045 PCGF6Q9BYE7 350 aa18.62■□□□□ 0.57
IRF1-208ENST00000472045 MYT1LQ9UL68 1186 aa18.6■□□□□ 0.57
IRF1-208ENST00000472045 CCER1Q8TC90 406 aaPredicted RBP18.44■□□□□ 0.54
IRF1-208ENST00000472045 PPARGC1BQ86YN6 1023 aaKnown RBP18.36■□□□□ 0.53
IRF1-208ENST00000472045 FBLN2P98095 1184 aa18.32■□□□□ 0.52
IRF1-208ENST00000472045 ITGAEP38570 1179 aa18.28■□□□□ 0.52
IRF1-208ENST00000472045 SCRIBQ14160 1630 aa18.27■□□□□ 0.52
IRF1-208ENST00000472045 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.52
IRF1-208ENST00000472045 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
IRF1-208ENST00000472045 CCDC180Q9P1Z9 1646 aa18.24■□□□□ 0.51
IRF1-208ENST00000472045 ZEB1P37275 1124 aaPredicted RBP18.22■□□□□ 0.51
IRF1-208ENST00000472045 LOC105371045A0A1W2PR82 267 aa18.15■□□□□ 0.5
IRF1-208ENST00000472045 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
IRF1-208ENST00000472045 RB1CC1Q8TDY2 1594 aa18.07■□□□□ 0.48
IRF1-208ENST00000472045 TRIM26Q12899 539 aaPredicted RBP17.99■□□□□ 0.47
IRF1-208ENST00000472045 FAM50AQ14320 339 aaKnown RBP17.95■□□□□ 0.46
IRF1-208ENST00000472045 POLR3GLQ9BT43 218 aa17.93■□□□□ 0.46
IRF1-208ENST00000472045 P3H3Q8IVL6 736 aa17.84■□□□□ 0.45
IRF1-208ENST00000472045 NACADO15069 1562 aa17.83■□□□□ 0.44
IRF1-208ENST00000472045 ARID3CA6NKF2 412 aa17.83■□□□□ 0.44
IRF1-208ENST00000472045 TRIM52Q96A61 297 aa17.82■□□□□ 0.44
IRF1-208ENST00000472045 CENPBP07199 599 aaPredicted RBP17.82■□□□□ 0.44
IRF1-208ENST00000472045 CSRNP3Q8WYN3 585 aa17.78■□□□□ 0.44
IRF1-208ENST00000472045 SLC4A1APQ9BWU0 796 aaKnown RBP17.78■□□□□ 0.44
IRF1-208ENST00000472045 NPM1P06748 294 aaKnown RBP eCLIP17.76■□□□□ 0.43
IRF1-208ENST00000472045 CDK11AQ9UQ88 783 aaPredicted RBP17.71■□□□□ 0.43
IRF1-208ENST00000472045 NEFLP07196 543 aa17.66■□□□□ 0.42
IRF1-208ENST00000472045 CNGB1Q14028 1251 aaPredicted RBP17.66■□□□□ 0.42
IRF1-208ENST00000472045 ZNF777Q9ULD5 760 aaPredicted RBP17.65■□□□□ 0.42
IRF1-208ENST00000472045 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
IRF1-208ENST00000472045 YTHDC1Q96MU7 727 aaKnown RBP17.64■□□□□ 0.41
IRF1-208ENST00000472045 ESF1Q9H501 851 aaKnown RBP17.61■□□□□ 0.41
IRF1-208ENST00000472045 BCANQ96GW7 911 aa17.58■□□□□ 0.4
IRF1-208ENST00000472045 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
IRF1-208ENST00000472045 NEUROD1Q13562 356 aa17.53■□□□□ 0.4
IRF1-208ENST00000472045 ZNF326Q5BKZ1 582 aaKnown RBP17.53■□□□□ 0.4
IRF1-208ENST00000472045 ERCC6Q03468 1493 aa17.52■□□□□ 0.4
IRF1-208ENST00000472045 PLPPR3Q6T4P5 718 aa17.44■□□□□ 0.38
IRF1-208ENST00000472045 ERICH6Q7L0X2 663 aa17.43■□□□□ 0.38
IRF1-208ENST00000472045 RSF1Q96T23 1441 aaPredicted RBP17.41■□□□□ 0.38
IRF1-208ENST00000472045 HRCP23327 699 aa17.39■□□□□ 0.37
IRF1-208ENST00000472045 STAG3Q9UJ98 1225 aa17.38■□□□□ 0.37
IRF1-208ENST00000472045 DCAF1Q9Y4B6 1507 aa17.35■□□□□ 0.37
IRF1-208ENST00000472045 BAZ1AQ9NRL2 1556 aaPredicted RBP17.33■□□□□ 0.36
IRF1-208ENST00000472045 CHGAP10645 457 aaKnown RBP17.32■□□□□ 0.36
IRF1-208ENST00000472045 WRNQ14191 1432 aaPredicted RBP eCLIP17.25■□□□□ 0.35
IRF1-208ENST00000472045 KCNH8Q96L42 1107 aa17.25■□□□□ 0.35
IRF1-208ENST00000472045 TSPY4P0CV99 314 aa17.24■□□□□ 0.35
IRF1-208ENST00000472045 TSPY10P0CW01 314 aa17.24■□□□□ 0.35
IRF1-208ENST00000472045 MTUS2Q5JR59 1369 aa17.23■□□□□ 0.35
IRF1-208ENST00000472045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
IRF1-208ENST00000472045 CECR2Q9BXF3 1484 aa17.21■□□□□ 0.35
IRF1-208ENST00000472045 PLEKHD1A6NEE1 506 aa17.19■□□□□ 0.34
IRF1-208ENST00000472045 KIF27Q86VH2 1401 aa17.18■□□□□ 0.34
IRF1-208ENST00000472045 CHIC2Q9UKJ5 165 aa17.18■□□□□ 0.34
IRF1-208ENST00000472045 SLC24A1O60721 1099 aa17.13■□□□□ 0.33
IRF1-208ENST00000472045 EEA1Q15075 1411 aa17.12■□□□□ 0.33
IRF1-208ENST00000472045 NEFMP07197 916 aa17.12■□□□□ 0.33
IRF1-208ENST00000472045 CLIP1P30622 1438 aa17.12■□□□□ 0.33
IRF1-208ENST00000472045 PDS5BQ9NTI5 1447 aa17.1■□□□□ 0.33
IRF1-208ENST00000472045 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
IRF1-208ENST00000472045 DIEXFQ68CQ4 756 aaKnown RBP17.08■□□□□ 0.32
IRF1-208ENST00000472045 ANP32CO43423 234 aa17.07■□□□□ 0.32
IRF1-208ENST00000472045 ARID4BQ4LE39 1312 aaPredicted RBP17.07■□□□□ 0.32
IRF1-208ENST00000472045 DAXXQ9UER7 740 aaPredicted RBP17.06■□□□□ 0.32
IRF1-208ENST00000472045 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
IRF1-208ENST00000472045 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
IRF1-208ENST00000472045 TONSLQ96HA7 1378 aa17.03■□□□□ 0.32
IRF1-208ENST00000472045 CLSPNQ9HAW4 1339 aa16.98■□□□□ 0.31
IRF1-208ENST00000472045 CUX2O14529 1486 aa16.98■□□□□ 0.31
IRF1-208ENST00000472045 CFDP1Q9UEE9 299 aaPredicted RBP16.97■□□□□ 0.31
IRF1-208ENST00000472045 MYO15BQ96JP2 1530 aa16.97■□□□□ 0.31
IRF1-208ENST00000472045 MROH2BQ7Z745 1585 aa16.96■□□□□ 0.31
IRF1-208ENST00000472045 PPP1R15AO75807 674 aaPredicted RBP16.96■□□□□ 0.31
IRF1-208ENST00000472045 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
IRF1-208ENST00000472045 EIF4G1Q04637 1599 aaKnown RBP16.93■□□□□ 0.3
IRF1-208ENST00000472045 RRP7BPQ9NSQ0 103 aa16.92■□□□□ 0.3
IRF1-208ENST00000472045 CARMIL1Q5VZK9 1371 aa16.92■□□□□ 0.3
IRF1-208ENST00000472045 ZBTB47Q9UFB7 747 aaPredicted RBP16.91■□□□□ 0.3
IRF1-208ENST00000472045 KDM2AQ9Y2K7 1162 aa16.9■□□□□ 0.3
IRF1-208ENST00000472045 CCDC88BA6NC98 1476 aa16.89■□□□□ 0.29
IRF1-208ENST00000472045 CEP162Q5TB80 1403 aa16.88■□□□□ 0.29
IRF1-208ENST00000472045 SCAF1Q9H7N4 1312 aaKnown RBP16.87■□□□□ 0.29
IRF1-208ENST00000472045 SOGA1O94964 1423 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms