RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 TENM1Q9UKZ4 2725 aa8.67□□□□□ -1.02
HDAC7-219ENST00000470668 IGLV7-43P04211 117 aa8.67□□□□□ -1.02
HDAC7-219ENST00000470668 VWFP04275 2813 aa8.64□□□□□ -1.03
HDAC7-219ENST00000470668 ZFHX3Q15911 3703 aa8.64□□□□□ -1.03
HDAC7-219ENST00000470668 A6NN06 94 aa8.64□□□□□ -1.03
HDAC7-219ENST00000470668 CSMD2Q7Z408 3487 aa8.63□□□□□ -1.03
HDAC7-219ENST00000470668 TENM3Q9P273 2699 aa8.63□□□□□ -1.03
HDAC7-219ENST00000470668 ADM2Q7Z4H4 148 aa8.62□□□□□ -1.03
HDAC7-219ENST00000470668 SPRR1BP22528 89 aa8.62□□□□□ -1.03
HDAC7-219ENST00000470668 LCE6AA0A183 80 aa8.62□□□□□ -1.03
HDAC7-219ENST00000470668 A0A1B0GU33 70 aa8.61□□□□□ -1.03
HDAC7-219ENST00000470668 Q5W150 140 aa8.61□□□□□ -1.03
HDAC7-219ENST00000470668 PDZD2O15018 2839 aa8.59□□□□□ -1.03
HDAC7-219ENST00000470668 KRTAP1-5Q9BYS1 174 aa8.57□□□□□ -1.04
HDAC7-219ENST00000470668 OTOGQ6ZRI0 2925 aa8.55□□□□□ -1.04
HDAC7-219ENST00000470668 A0A087X002 238 aa8.54□□□□□ -1.04
HDAC7-219ENST00000470668 NOTCH2NLQ7Z3S9 236 aa8.54□□□□□ -1.04
HDAC7-219ENST00000470668 LINC00304Q8N9R0 145 aa8.53□□□□□ -1.04
HDAC7-219ENST00000470668 Q6ZR54 194 aa8.52□□□□□ -1.04
HDAC7-219ENST00000470668 PKD1L1Q8TDX9 2849 aa8.52□□□□□ -1.05
HDAC7-219ENST00000470668 NBPF19A0A087WUL8 3843 aa8.51□□□□□ -1.05
HDAC7-219ENST00000470668 WWC2-AS2Q96NR7 200 aa8.5□□□□□ -1.05
HDAC7-219ENST00000470668 SMR3BP02814 79 aaPredicted RBP8.49□□□□□ -1.05
HDAC7-219ENST00000470668 DMAC1Q96GE9 116 aa8.49□□□□□ -1.05
HDAC7-219ENST00000470668 KRTAP7-1Q8IUC3 87 aa8.48□□□□□ -1.05
HDAC7-219ENST00000470668 PANO1I0J062 215 aa8.46□□□□□ -1.05
HDAC7-219ENST00000470668 KRTAP11-1Q8IUC1 163 aa8.45□□□□□ -1.06
HDAC7-219ENST00000470668 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
HDAC7-219ENST00000470668 TENM2Q9NT68 2774 aa8.34□□□□□ -1.07
HDAC7-219ENST00000470668 BSNQ9UPA5 3926 aa8.34□□□□□ -1.07
HDAC7-219ENST00000470668 PLAC8Q9NZF1 115 aa8.34□□□□□ -1.07
HDAC7-219ENST00000470668 ASB16-AS1Q495Z4 193 aa8.32□□□□□ -1.08
HDAC7-219ENST00000470668 TGP01266 2768 aa8.28□□□□□ -1.08
HDAC7-219ENST00000470668 LINC00483Q53H64 154 aa8.28□□□□□ -1.08
HDAC7-219ENST00000470668 H1FX-AS1Q4G0G2 97 aa8.23□□□□□ -1.09
HDAC7-219ENST00000470668 LUZP6Q538Z0 58 aa8.22□□□□□ -1.09
HDAC7-219ENST00000470668 ROMO1P60602 79 aa8.22□□□□□ -1.09
HDAC7-219ENST00000470668 RPL37P61927 97 aaKnown RBP8.22□□□□□ -1.09
HDAC7-219ENST00000470668 KRTAP25-1Q3LHN0 102 aa8.21□□□□□ -1.09
HDAC7-219ENST00000470668 J3QL48 77 aa8.17□□□□□ -1.1
HDAC7-219ENST00000470668 KRTAP10-2P60368 255 aa8.17□□□□□ -1.1
HDAC7-219ENST00000470668 VPS13CQ709C8 3753 aa8.13□□□□□ -1.11
HDAC7-219ENST00000470668 TRRAPQ9Y4A5 3859 aa8.12□□□□□ -1.11
HDAC7-219ENST00000470668 SRRM2Q9UQ35 2752 aaKnown RBP8.12□□□□□ -1.11
HDAC7-219ENST00000470668 KRTAP13-1Q8IUC0 172 aa8.1□□□□□ -1.11
HDAC7-219ENST00000470668 KRTAP10-1P60331 282 aa8.09□□□□□ -1.11
HDAC7-219ENST00000470668 NDUFAF8A1L188 74 aa8.09□□□□□ -1.12
HDAC7-219ENST00000470668 S4R3F8 94 aa8.03□□□□□ -1.12
HDAC7-219ENST00000470668 COX6B2Q6YFQ2 88 aa8.03□□□□□ -1.12
HDAC7-219ENST00000470668 A8MUU9 505 aa8.02□□□□□ -1.13
HDAC7-219ENST00000470668 Q6ZRN7 208 aaPredicted RBP8.02□□□□□ -1.13
HDAC7-219ENST00000470668 KRTAP16-1A8MUX0 517 aa8.01□□□□□ -1.13
HDAC7-219ENST00000470668 CAMK2N1Q7Z7J9 78 aa8.01□□□□□ -1.13
HDAC7-219ENST00000470668 A0A0A0MQY5 61 aa7.97□□□□□ -1.13
HDAC7-219ENST00000470668 KRTAP13-2Q52LG2 175 aa7.96□□□□□ -1.13
HDAC7-219ENST00000470668 Q6ZSA8 131 aa7.95□□□□□ -1.14
HDAC7-219ENST00000470668 R4GN34 69 aa7.93□□□□□ -1.14
HDAC7-219ENST00000470668 FBN3Q75N90 2809 aa7.9□□□□□ -1.14
HDAC7-219ENST00000470668 H0YAA0 97 aa7.86□□□□□ -1.15
HDAC7-219ENST00000470668 C10orf95Q9H7T3 257 aa7.85□□□□□ -1.15
HDAC7-219ENST00000470668 ZNF469Q96JG9 3925 aaPredicted RBP7.85□□□□□ -1.15
HDAC7-219ENST00000470668 M0QZ58 72 aa7.84□□□□□ -1.15
HDAC7-219ENST00000470668 ANK3Q12955 4377 aaKnown RBP7.81□□□□□ -1.16
HDAC7-219ENST00000470668 C20orf166-AS1Q96NR2 134 aa7.75□□□□□ -1.17
HDAC7-219ENST00000470668 COL7A1Q02388 2944 aa7.75□□□□□ -1.17
HDAC7-219ENST00000470668 Q5VSD8 79 aa7.69□□□□□ -1.18
HDAC7-219ENST00000470668 KRTAP13-3Q3SY46 172 aa7.67□□□□□ -1.18
HDAC7-219ENST00000470668 KRTAP21-3Q3LHN1 58 aa7.66□□□□□ -1.18
HDAC7-219ENST00000470668 CSMD3Q7Z407 3707 aa7.66□□□□□ -1.18
HDAC7-219ENST00000470668 MEGF8Q7Z7M0 2845 aa7.65□□□□□ -1.18
HDAC7-219ENST00000470668 M0R2T5 61 aa7.6□□□□□ -1.19
HDAC7-219ENST00000470668 KRTAP1-4P0C5Y4 121 aa7.58□□□□□ -1.2
HDAC7-219ENST00000470668 RPS29P62273 56 aaKnown RBP7.58□□□□□ -1.2
HDAC7-219ENST00000470668 PLAC4Q8WY50 150 aa7.51□□□□□ -1.21
HDAC7-219ENST00000470668 P0C880 135 aa7.48□□□□□ -1.21
HDAC7-219ENST00000470668 SEC61BP60468 96 aaKnown RBP7.41□□□□□ -1.22
HDAC7-219ENST00000470668 KRTAP10-8P60410 259 aa7.38□□□□□ -1.23
HDAC7-219ENST00000470668 AKAP9Q99996 3911 aa7.38□□□□□ -1.23
HDAC7-219ENST00000470668 TPRXLQ17RH7 258 aa7.35□□□□□ -1.23
HDAC7-219ENST00000470668 KRTAP3-1Q9BYR8 98 aa7.27□□□□□ -1.25
HDAC7-219ENST00000470668 XP32Q5T750 250 aa7.25□□□□□ -1.25
HDAC7-219ENST00000470668 KRTAP12-2P59991 146 aa7.25□□□□□ -1.25
HDAC7-219ENST00000470668 DNHD1Q96M86 4753 aa7.24□□□□□ -1.25
HDAC7-219ENST00000470668 TNP1P09430 55 aa7.22□□□□□ -1.25
HDAC7-219ENST00000470668 HUWE1Q7Z6Z7 4374 aaKnown RBP7.19□□□□□ -1.26
HDAC7-219ENST00000470668 KRTAP13-4Q3LI77 160 aa7.15□□□□□ -1.26
HDAC7-219ENST00000470668 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
HDAC7-219ENST00000470668 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
HDAC7-219ENST00000470668 KRTAP10-6P60371 365 aaPredicted RBP7.07□□□□□ -1.28
HDAC7-219ENST00000470668 DNAH10Q8IVF4 4471 aa7□□□□□ -1.29
HDAC7-219ENST00000470668 A0A1B0GVY2 172 aa7□□□□□ -1.29
HDAC7-219ENST00000470668 KRTAP15-1Q3LI76 137 aa6.96□□□□□ -1.3
HDAC7-219ENST00000470668 PLECQ15149 4684 aaKnown RBP6.96□□□□□ -1.3
HDAC7-219ENST00000470668 DNAH9Q9NYC9 4486 aa6.95□□□□□ -1.3
HDAC7-219ENST00000470668 DNAH11Q96DT5 4516 aa6.89□□□□□ -1.31
HDAC7-219ENST00000470668 KRTAP3-2Q9BYR7 98 aa6.84□□□□□ -1.31
HDAC7-219ENST00000470668 KRTAP3-3Q9BYR6 98 aa6.8□□□□□ -1.32
HDAC7-219ENST00000470668 DNAH1Q9P2D7 4330 aa6.79□□□□□ -1.32
HDAC7-219ENST00000470668 PRKDCP78527 4128 aaKnown RBP6.77□□□□□ -1.33
HDAC7-219ENST00000470668 DNAH5Q8TE73 4624 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms