RNA–Protein interactions for RNA: ENST00000460766.5

IMP4-208, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 1 (best)

Gene IMP4, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-208ENST00000460766 DNHD1Q96M86 4753 aa12.11□□□□□ -0.47
IMP4-208ENST00000460766 MRPL34Q9BQ48 92 aaKnown RBP12.1□□□□□ -0.47
IMP4-208ENST00000460766 PSPHP1O15172 72 aa12.09□□□□□ -0.47
IMP4-208ENST00000460766 KRTAP10-2P60368 255 aa12.06□□□□□ -0.48
IMP4-208ENST00000460766 IGLV7-46A0A075B6I9 117 aa12.05□□□□□ -0.48
IMP4-208ENST00000460766 DNAH6Q9C0G6 4158 aa12.04□□□□□ -0.48
IMP4-208ENST00000460766 CD164Q04900 197 aa12.04□□□□□ -0.48
IMP4-208ENST00000460766 V9GYY9 64 aa12□□□□□ -0.49
IMP4-208ENST00000460766 ALMS1Q8TCU4 4167 aa12□□□□□ -0.49
IMP4-208ENST00000460766 COA5Q86WW8 74 aa11.99□□□□□ -0.49
IMP4-208ENST00000460766 SSBP3-AS1Q7Z2R9 100 aa11.98□□□□□ -0.49
IMP4-208ENST00000460766 DNAH11Q96DT5 4516 aa11.98□□□□□ -0.49
IMP4-208ENST00000460766 A8MUN3 132 aa11.98□□□□□ -0.49
IMP4-208ENST00000460766 DNAH5Q8TE73 4624 aa11.95□□□□□ -0.5
IMP4-208ENST00000460766 Q8N9P0 234 aaPredicted RBP11.94□□□□□ -0.5
IMP4-208ENST00000460766 KRTAP10-1P60331 282 aa11.9□□□□□ -0.5
IMP4-208ENST00000460766 Q5W150 140 aa11.9□□□□□ -0.5
IMP4-208ENST00000460766 C1orf195Q5TG92 126 aa11.9□□□□□ -0.51
IMP4-208ENST00000460766 LIMD2Q9BT23 127 aa11.89□□□□□ -0.51
IMP4-208ENST00000460766 Q5VV11 94 aa11.87□□□□□ -0.51
IMP4-208ENST00000460766 KRTAP13-2Q52LG2 175 aa11.87□□□□□ -0.51
IMP4-208ENST00000460766 Q6ZSA8 131 aa11.87□□□□□ -0.51
IMP4-208ENST00000460766 LOC101927531A0A1B0GV80 90 aa11.86□□□□□ -0.51
IMP4-208ENST00000460766 PRR15LQ9BU68 103 aa11.86□□□□□ -0.51
IMP4-208ENST00000460766 C8orf87E5RJ46 101 aa11.85□□□□□ -0.51
IMP4-208ENST00000460766 KRTAP13-3Q3SY46 172 aa11.83□□□□□ -0.52
IMP4-208ENST00000460766 LINC00313P59037 77 aa11.82□□□□□ -0.52
IMP4-208ENST00000460766 LRP1BQ9NZR2 4599 aa11.81□□□□□ -0.52
IMP4-208ENST00000460766 CHKB-CPT1BH3BT56 60 aa11.8□□□□□ -0.52
IMP4-208ENST00000460766 HRES1P13985 223 aa11.8□□□□□ -0.52
IMP4-208ENST00000460766 HYDINQ4G0P3 5121 aa11.8□□□□□ -0.52
IMP4-208ENST00000460766 PKD1P98161 4303 aa11.79□□□□□ -0.52
IMP4-208ENST00000460766 SPAG11AQ6PDA7 123 aa11.77□□□□□ -0.53
IMP4-208ENST00000460766 FAT2Q9NYQ8 4349 aa11.76□□□□□ -0.53
IMP4-208ENST00000460766 KRTAP1-4P0C5Y4 121 aa11.74□□□□□ -0.53
IMP4-208ENST00000460766 RETNLBQ9BQ08 111 aa11.74□□□□□ -0.53
IMP4-208ENST00000460766 A8MU10 97 aa11.71□□□□□ -0.53
IMP4-208ENST00000460766 FAM229AH3BQW9 127 aa11.7□□□□□ -0.54
IMP4-208ENST00000460766 Q75L30 129 aa11.69□□□□□ -0.54
IMP4-208ENST00000460766 LINC01558Q9Y6Z2 57 aa11.68□□□□□ -0.54
IMP4-208ENST00000460766 VPS13BQ7Z7G8 4022 aa11.67□□□□□ -0.54
IMP4-208ENST00000460766 PLA2G1BP04054 148 aaKnown RBP11.67□□□□□ -0.54
IMP4-208ENST00000460766 A6NED7 52 aa11.65□□□□□ -0.54
IMP4-208ENST00000460766 C4orf48Q5BLP8 95 aa11.64□□□□□ -0.55
IMP4-208ENST00000460766 KRTAP16-1A8MUX0 517 aa11.63□□□□□ -0.55
IMP4-208ENST00000460766 ACYP2P14621 99 aa11.63□□□□□ -0.55
IMP4-208ENST00000460766 PRR26Q8N8Z3 221 aa11.63□□□□□ -0.55
IMP4-208ENST00000460766 TYMSOSQ8TAI1 123 aa11.63□□□□□ -0.55
IMP4-208ENST00000460766 IGKV2-30P06310 120 aa11.6□□□□□ -0.55
IMP4-208ENST00000460766 DMAC1Q96GE9 116 aa11.57□□□□□ -0.56
IMP4-208ENST00000460766 LCA10Q71F78 164 aa11.56□□□□□ -0.56
IMP4-208ENST00000460766 SPINK1P00995 79 aa11.55□□□□□ -0.56
IMP4-208ENST00000460766 SPTSSBQ8NFR3 76 aa11.52□□□□□ -0.57
IMP4-208ENST00000460766 IGKV2D-30A0A075B6S6 120 aa11.51□□□□□ -0.57
IMP4-208ENST00000460766 PKHD1P08F94 4074 aa11.51□□□□□ -0.57
IMP4-208ENST00000460766 PMAIP1Q13794 54 aa11.5□□□□□ -0.57
IMP4-208ENST00000460766 SPINK7P58062 85 aa11.47□□□□□ -0.57
IMP4-208ENST00000460766 CDC42SE1Q9NRR8 79 aa11.47□□□□□ -0.57
IMP4-208ENST00000460766 LINC00304Q8N9R0 145 aa11.45□□□□□ -0.58
IMP4-208ENST00000460766 SMR3BP02814 79 aaPredicted RBP11.44□□□□□ -0.58
IMP4-208ENST00000460766 ATP11AUNQ6ZP68 121 aa11.43□□□□□ -0.58
IMP4-208ENST00000460766 SACSQ9NZJ4 4579 aa11.38□□□□□ -0.59
IMP4-208ENST00000460766 KRTAP21-3Q3LHN1 58 aa11.37□□□□□ -0.59
IMP4-208ENST00000460766 C7orf65Q6ZTY9 151 aa11.36□□□□□ -0.59
IMP4-208ENST00000460766 RPS29P62273 56 aaKnown RBP11.35□□□□□ -0.59
IMP4-208ENST00000460766 A0A1B0GU69 56 aa11.32□□□□□ -0.6
IMP4-208ENST00000460766 DYNC1H1Q14204 4646 aaKnown RBP11.29□□□□□ -0.6
IMP4-208ENST00000460766 A6NN06 94 aa11.25□□□□□ -0.61
IMP4-208ENST00000460766 C9orf92A6NGG3 77 aa11.25□□□□□ -0.61
IMP4-208ENST00000460766 A0A1B0GVY2 172 aa11.24□□□□□ -0.61
IMP4-208ENST00000460766 Q8N1X5 172 aa11.23□□□□□ -0.61
IMP4-208ENST00000460766 FAT1Q14517 4588 aa11.22□□□□□ -0.61
IMP4-208ENST00000460766 KTN1-AS1Q86SY8 53 aa11.2□□□□□ -0.62
IMP4-208ENST00000460766 KRTAP10-4P60372 401 aaPredicted RBP11.2□□□□□ -0.62
IMP4-208ENST00000460766 APOBP04114 4563 aaKnown RBP11.16□□□□□ -0.62
IMP4-208ENST00000460766 C20orf166-AS1Q96NR2 134 aa11.13□□□□□ -0.63
IMP4-208ENST00000460766 A8MUU9 505 aa11.12□□□□□ -0.63
IMP4-208ENST00000460766 PKHD1L1Q86WI1 4243 aa11.11□□□□□ -0.63
IMP4-208ENST00000460766 UQCR11O14957 56 aa11.09□□□□□ -0.63
IMP4-208ENST00000460766 SEC61GP60059 68 aa11.08□□□□□ -0.64
IMP4-208ENST00000460766 SPATA8Q6RVD6 105 aa11.07□□□□□ -0.64
IMP4-208ENST00000460766 MIR22HGQ0VDD5 57 aa11.06□□□□□ -0.64
IMP4-208ENST00000460766 RYR2Q92736 4967 aa11.01□□□□□ -0.65
IMP4-208ENST00000460766 KRTAP3-1Q9BYR8 98 aa10.95□□□□□ -0.66
IMP4-208ENST00000460766 KMT2CQ8NEZ4 4911 aaKnown RBP10.94□□□□□ -0.66
IMP4-208ENST00000460766 RBM12B-AS1Q9P1G2 102 aa10.9□□□□□ -0.66
IMP4-208ENST00000460766 FLG2Q5D862 2391 aaPredicted RBP10.88□□□□□ -0.67
IMP4-208ENST00000460766 LRP1Q07954 4544 aaKnown RBP10.8□□□□□ -0.68
IMP4-208ENST00000460766 Q5VSD8 79 aa10.79□□□□□ -0.68
IMP4-208ENST00000460766 KRTAP10-8P60410 259 aa10.78□□□□□ -0.68
IMP4-208ENST00000460766 COX6B2Q6YFQ2 88 aa10.78□□□□□ -0.68
IMP4-208ENST00000460766 PRAC1Q96KF2 57 aa10.77□□□□□ -0.68
IMP4-208ENST00000460766 ADM2Q7Z4H4 148 aa10.77□□□□□ -0.69
IMP4-208ENST00000460766 TNXBP22105 4242 aa10.77□□□□□ -0.69
IMP4-208ENST00000460766 FAT3Q8TDW7 4589 aa10.76□□□□□ -0.69
IMP4-208ENST00000460766 H0YAA0 97 aa10.72□□□□□ -0.69
IMP4-208ENST00000460766 A0A1B0GU33 70 aa10.71□□□□□ -0.69
IMP4-208ENST00000460766 HSPG2P98160 4391 aa10.7□□□□□ -0.7
IMP4-208ENST00000460766 H1FX-AS1Q4G0G2 97 aa10.66□□□□□ -0.7
IMP4-208ENST00000460766 RPL37P61927 97 aaKnown RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms