RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 MYO15AQ9UKN7 3530 aa6.43□□□□□ -1.38
AMBRA1-202ENST00000458649 STAB2Q8WWQ8 2551 aa6.42□□□□□ -1.38
AMBRA1-202ENST00000458649 S4R3F8 94 aa6.42□□□□□ -1.38
AMBRA1-202ENST00000458649 SPATA8Q6RVD6 105 aa6.4□□□□□ -1.38
AMBRA1-202ENST00000458649 DMBT1Q9UGM3 2413 aaPredicted RBP6.39□□□□□ -1.39
AMBRA1-202ENST00000458649 NF1P21359 2839 aa6.39□□□□□ -1.39
AMBRA1-202ENST00000458649 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
AMBRA1-202ENST00000458649 LINC00472Q9H8W2 130 aa6.38□□□□□ -1.39
AMBRA1-202ENST00000458649 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
AMBRA1-202ENST00000458649 Q5W150 140 aa6.38□□□□□ -1.39
AMBRA1-202ENST00000458649 CRYBG3Q68DQ2 2970 aa6.37□□□□□ -1.39
AMBRA1-202ENST00000458649 DCHS2Q6V1P9 2916 aa6.36□□□□□ -1.39
AMBRA1-202ENST00000458649 NDUFAF8A1L188 74 aa6.35□□□□□ -1.39
AMBRA1-202ENST00000458649 RPS29P62273 56 aaKnown RBP6.35□□□□□ -1.39
AMBRA1-202ENST00000458649 FBN2P35556 2912 aa6.34□□□□□ -1.39
AMBRA1-202ENST00000458649 PANO1I0J062 215 aa6.33□□□□□ -1.4
AMBRA1-202ENST00000458649 H1FX-AS1Q4G0G2 97 aa6.32□□□□□ -1.4
AMBRA1-202ENST00000458649 ADM2Q7Z4H4 148 aa6.31□□□□□ -1.4
AMBRA1-202ENST00000458649 R4GN34 69 aa6.31□□□□□ -1.4
AMBRA1-202ENST00000458649 TENM4Q6N022 2769 aa6.3□□□□□ -1.4
AMBRA1-202ENST00000458649 Q6ZRN7 208 aaPredicted RBP6.3□□□□□ -1.4
AMBRA1-202ENST00000458649 A0A087X002 238 aa6.28□□□□□ -1.4
AMBRA1-202ENST00000458649 MXRA5Q9NR99 2828 aa6.28□□□□□ -1.4
AMBRA1-202ENST00000458649 KRTAP29-1A8MX34 341 aaPredicted RBP6.26□□□□□ -1.41
AMBRA1-202ENST00000458649 A8MU10 97 aa6.25□□□□□ -1.41
AMBRA1-202ENST00000458649 KRTAP7-1Q8IUC3 87 aa6.24□□□□□ -1.41
AMBRA1-202ENST00000458649 RELNP78509 3460 aa6.23□□□□□ -1.41
AMBRA1-202ENST00000458649 KRTAP11-1Q8IUC1 163 aa6.22□□□□□ -1.41
AMBRA1-202ENST00000458649 MUC3AQ02505 3323 aa6.2□□□□□ -1.42
AMBRA1-202ENST00000458649 PLAC4Q8WY50 150 aa6.18□□□□□ -1.42
AMBRA1-202ENST00000458649 WDFY3Q8IZQ1 3526 aa6.17□□□□□ -1.42
AMBRA1-202ENST00000458649 LAMA5O15230 3695 aa6.15□□□□□ -1.43
AMBRA1-202ENST00000458649 DCHS1Q96JQ0 3298 aa6.14□□□□□ -1.43
AMBRA1-202ENST00000458649 M0QZ58 72 aa6.13□□□□□ -1.43
AMBRA1-202ENST00000458649 KRTAP13-1Q8IUC0 172 aa6.12□□□□□ -1.43
AMBRA1-202ENST00000458649 C20orf166-AS1Q96NR2 134 aa6.12□□□□□ -1.43
AMBRA1-202ENST00000458649 DMDP11532 3685 aa6.1□□□□□ -1.43
AMBRA1-202ENST00000458649 A8MUU9 505 aa6.1□□□□□ -1.43
AMBRA1-202ENST00000458649 ASPMQ8IZT6 3477 aa6.08□□□□□ -1.44
AMBRA1-202ENST00000458649 PDZD2O15018 2839 aa6.06□□□□□ -1.44
AMBRA1-202ENST00000458649 NOTCH2NLQ7Z3S9 236 aa6.06□□□□□ -1.44
AMBRA1-202ENST00000458649 KRTAP13-2Q52LG2 175 aa6.05□□□□□ -1.44
AMBRA1-202ENST00000458649 CELSR1Q9NYQ6 3014 aa6.05□□□□□ -1.44
AMBRA1-202ENST00000458649 TENM3Q9P273 2699 aa6.04□□□□□ -1.44
AMBRA1-202ENST00000458649 ZFHX4Q86UP3 3567 aa6.03□□□□□ -1.44
AMBRA1-202ENST00000458649 TENM1Q9UKZ4 2725 aa6.01□□□□□ -1.45
AMBRA1-202ENST00000458649 OTOGQ6ZRI0 2925 aa5.93□□□□□ -1.46
AMBRA1-202ENST00000458649 VWFP04275 2813 aa5.9□□□□□ -1.47
AMBRA1-202ENST00000458649 SMG1Q96Q15 3661 aaKnown RBP5.88□□□□□ -1.47
AMBRA1-202ENST00000458649 TPRXLQ17RH7 258 aa5.88□□□□□ -1.47
AMBRA1-202ENST00000458649 FBN1P35555 2871 aaKnown RBP5.86□□□□□ -1.47
AMBRA1-202ENST00000458649 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
AMBRA1-202ENST00000458649 TENM2Q9NT68 2774 aa5.85□□□□□ -1.47
AMBRA1-202ENST00000458649 CSMD1Q96PZ7 3565 aa5.83□□□□□ -1.48
AMBRA1-202ENST00000458649 KRTAP1-4P0C5Y4 121 aa5.82□□□□□ -1.48
AMBRA1-202ENST00000458649 PKD1L1Q8TDX9 2849 aa5.82□□□□□ -1.48
AMBRA1-202ENST00000458649 P0C880 135 aa5.81□□□□□ -1.48
AMBRA1-202ENST00000458649 XP32Q5T750 250 aa5.81□□□□□ -1.48
AMBRA1-202ENST00000458649 NBPF19A0A087WUL8 3843 aa5.8□□□□□ -1.48
AMBRA1-202ENST00000458649 TGP01266 2768 aa5.79□□□□□ -1.48
AMBRA1-202ENST00000458649 PP632Q6XCG6 107 aa5.79□□□□□ -1.48
AMBRA1-202ENST00000458649 TNP1P09430 55 aa5.75□□□□□ -1.49
AMBRA1-202ENST00000458649 A0A1B0GVY2 172 aa5.73□□□□□ -1.49
AMBRA1-202ENST00000458649 SVEP1Q4LDE5 3571 aa5.72□□□□□ -1.49
AMBRA1-202ENST00000458649 ZFHX3Q15911 3703 aa5.71□□□□□ -1.5
AMBRA1-202ENST00000458649 H0YAA0 97 aa5.71□□□□□ -1.5
AMBRA1-202ENST00000458649 SPENQ96T58 3664 aaKnown RBP5.71□□□□□ -1.5
AMBRA1-202ENST00000458649 CSMD2Q7Z408 3487 aa5.67□□□□□ -1.5
AMBRA1-202ENST00000458649 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
AMBRA1-202ENST00000458649 ANK3Q12955 4377 aaKnown RBP5.66□□□□□ -1.5
AMBRA1-202ENST00000458649 BSNQ9UPA5 3926 aa5.66□□□□□ -1.5
AMBRA1-202ENST00000458649 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
AMBRA1-202ENST00000458649 KRTAP10-8P60410 259 aa5.63□□□□□ -1.51
AMBRA1-202ENST00000458649 KRTAP10-10P60014 251 aa5.62□□□□□ -1.51
AMBRA1-202ENST00000458649 CUBNO60494 3623 aa5.56□□□□□ -1.52
AMBRA1-202ENST00000458649 TRRAPQ9Y4A5 3859 aa5.54□□□□□ -1.52
AMBRA1-202ENST00000458649 FBN3Q75N90 2809 aa5.48□□□□□ -1.53
AMBRA1-202ENST00000458649 MEGF8Q7Z7M0 2845 aa5.44□□□□□ -1.54
AMBRA1-202ENST00000458649 SRRM2Q9UQ35 2752 aaKnown RBP5.42□□□□□ -1.54
AMBRA1-202ENST00000458649 VPS13CQ709C8 3753 aa5.31□□□□□ -1.56
AMBRA1-202ENST00000458649 COL7A1Q02388 2944 aa5.29□□□□□ -1.56
AMBRA1-202ENST00000458649 ZNF469Q96JG9 3925 aaPredicted RBP5.25□□□□□ -1.57
AMBRA1-202ENST00000458649 HUWE1Q7Z6Z7 4374 aaKnown RBP5.24□□□□□ -1.57
AMBRA1-202ENST00000458649 KRTAP12-2P59991 146 aa5.23□□□□□ -1.57
AMBRA1-202ENST00000458649 INE1O15225 51 aa5.21□□□□□ -1.58
AMBRA1-202ENST00000458649 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
AMBRA1-202ENST00000458649 KRTAP13-4Q3LI77 160 aa5.19□□□□□ -1.58
AMBRA1-202ENST00000458649 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
AMBRA1-202ENST00000458649 KRTAP12-1P59990 96 aa5.16□□□□□ -1.58
AMBRA1-202ENST00000458649 AKAP9Q99996 3911 aa5.15□□□□□ -1.59
AMBRA1-202ENST00000458649 MT1HL1P0DM35 61 aa5.15□□□□□ -1.59
AMBRA1-202ENST00000458649 KRTAP10-4P60372 401 aaPredicted RBP5.14□□□□□ -1.59
AMBRA1-202ENST00000458649 DNAH9Q9NYC9 4486 aa5.07□□□□□ -1.6
AMBRA1-202ENST00000458649 KRTAP10-6P60371 365 aaPredicted RBP5□□□□□ -1.61
AMBRA1-202ENST00000458649 KRTAP4-5Q9BYR2 181 aa4.96□□□□□ -1.62
AMBRA1-202ENST00000458649 CSMD3Q7Z407 3707 aa4.95□□□□□ -1.62
AMBRA1-202ENST00000458649 ALMS1Q8TCU4 4167 aa4.94□□□□□ -1.62
AMBRA1-202ENST00000458649 PLECQ15149 4684 aaKnown RBP4.93□□□□□ -1.62
AMBRA1-202ENST00000458649 KRTAP3-3Q9BYR6 98 aa4.91□□□□□ -1.62
AMBRA1-202ENST00000458649 DNHD1Q96M86 4753 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms