RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 MRPL34Q9BQ48 92 aaKnown RBP12.18□□□□□ -0.46
CRAT-207ENST00000458362 DNHD1Q96M86 4753 aa12.16□□□□□ -0.46
CRAT-207ENST00000458362 LY6G6CO95867 125 aa12.16□□□□□ -0.46
CRAT-207ENST00000458362 SPINK6Q6UWN8 80 aa12.14□□□□□ -0.47
CRAT-207ENST00000458362 A8MUN3 132 aa12.14□□□□□ -0.47
CRAT-207ENST00000458362 CIRBP-AS1Q8TBR5 109 aa12.14□□□□□ -0.47
CRAT-207ENST00000458362 DNAH6Q9C0G6 4158 aa12.13□□□□□ -0.47
CRAT-207ENST00000458362 COA5Q86WW8 74 aa12.12□□□□□ -0.47
CRAT-207ENST00000458362 ALMS1Q8TCU4 4167 aa12.11□□□□□ -0.47
CRAT-207ENST00000458362 KRTAP10-2P60368 255 aa12.11□□□□□ -0.47
CRAT-207ENST00000458362 Q8N9P0 234 aaPredicted RBP12.11□□□□□ -0.47
CRAT-207ENST00000458362 V9GYY9 64 aa12.1□□□□□ -0.47
CRAT-207ENST00000458362 DNAH5Q8TE73 4624 aa12.06□□□□□ -0.48
CRAT-207ENST00000458362 DNAH11Q96DT5 4516 aa12.06□□□□□ -0.48
CRAT-207ENST00000458362 Q5VV11 94 aa12.06□□□□□ -0.48
CRAT-207ENST00000458362 Q5W150 140 aa12.04□□□□□ -0.48
CRAT-207ENST00000458362 SSBP3-AS1Q7Z2R9 100 aa12.03□□□□□ -0.48
CRAT-207ENST00000458362 KRTAP13-3Q3SY46 172 aa12.01□□□□□ -0.49
CRAT-207ENST00000458362 C1orf195Q5TG92 126 aa12.01□□□□□ -0.49
CRAT-207ENST00000458362 LIMD2Q9BT23 127 aa12□□□□□ -0.49
CRAT-207ENST00000458362 PRR15LQ9BU68 103 aa11.99□□□□□ -0.49
CRAT-207ENST00000458362 KRTAP13-2Q52LG2 175 aa11.97□□□□□ -0.49
CRAT-207ENST00000458362 KRTAP10-1P60331 282 aa11.96□□□□□ -0.49
CRAT-207ENST00000458362 HRES1P13985 223 aa11.95□□□□□ -0.5
CRAT-207ENST00000458362 LOC101927531A0A1B0GV80 90 aa11.94□□□□□ -0.5
CRAT-207ENST00000458362 A8MU10 97 aa11.94□□□□□ -0.5
CRAT-207ENST00000458362 Q6ZSA8 131 aa11.94□□□□□ -0.5
CRAT-207ENST00000458362 C8orf87E5RJ46 101 aa11.92□□□□□ -0.5
CRAT-207ENST00000458362 CHKB-CPT1BH3BT56 60 aa11.91□□□□□ -0.5
CRAT-207ENST00000458362 PKD1P98161 4303 aa11.91□□□□□ -0.5
CRAT-207ENST00000458362 LRP1BQ9NZR2 4599 aa11.89□□□□□ -0.51
CRAT-207ENST00000458362 FAT2Q9NYQ8 4349 aa11.87□□□□□ -0.51
CRAT-207ENST00000458362 SPAG11AQ6PDA7 123 aa11.87□□□□□ -0.51
CRAT-207ENST00000458362 LINC00313P59037 77 aa11.86□□□□□ -0.51
CRAT-207ENST00000458362 Q75L30 129 aa11.85□□□□□ -0.51
CRAT-207ENST00000458362 HYDINQ4G0P3 5121 aa11.84□□□□□ -0.51
CRAT-207ENST00000458362 LINC01558Q9Y6Z2 57 aa11.83□□□□□ -0.52
CRAT-207ENST00000458362 KRTAP1-4P0C5Y4 121 aa11.83□□□□□ -0.52
CRAT-207ENST00000458362 RETNLBQ9BQ08 111 aa11.82□□□□□ -0.52
CRAT-207ENST00000458362 KRTAP16-1A8MUX0 517 aa11.77□□□□□ -0.53
CRAT-207ENST00000458362 VPS13BQ7Z7G8 4022 aa11.76□□□□□ -0.53
CRAT-207ENST00000458362 FAM229AH3BQW9 127 aa11.76□□□□□ -0.53
CRAT-207ENST00000458362 LCA10Q71F78 164 aa11.76□□□□□ -0.53
CRAT-207ENST00000458362 PRR26Q8N8Z3 221 aa11.76□□□□□ -0.53
CRAT-207ENST00000458362 A6NED7 52 aa11.75□□□□□ -0.53
CRAT-207ENST00000458362 IGKV2-30P06310 120 aa11.71□□□□□ -0.54
CRAT-207ENST00000458362 ACYP2P14621 99 aa11.7□□□□□ -0.54
CRAT-207ENST00000458362 DMAC1Q96GE9 116 aa11.69□□□□□ -0.54
CRAT-207ENST00000458362 PLA2G1BP04054 148 aaKnown RBP11.66□□□□□ -0.54
CRAT-207ENST00000458362 SPINK7P58062 85 aa11.64□□□□□ -0.55
CRAT-207ENST00000458362 TYMSOSQ8TAI1 123 aa11.63□□□□□ -0.55
CRAT-207ENST00000458362 PMAIP1Q13794 54 aa11.62□□□□□ -0.55
CRAT-207ENST00000458362 SPTSSBQ8NFR3 76 aa11.62□□□□□ -0.55
CRAT-207ENST00000458362 CDC42SE1Q9NRR8 79 aa11.62□□□□□ -0.55
CRAT-207ENST00000458362 KRTAP21-3Q3LHN1 58 aa11.61□□□□□ -0.55
CRAT-207ENST00000458362 C4orf48Q5BLP8 95 aa11.61□□□□□ -0.55
CRAT-207ENST00000458362 ATP11AUNQ6ZP68 121 aa11.57□□□□□ -0.56
CRAT-207ENST00000458362 IGKV2D-30A0A075B6S6 120 aa11.56□□□□□ -0.56
CRAT-207ENST00000458362 PKHD1P08F94 4074 aa11.56□□□□□ -0.56
CRAT-207ENST00000458362 SPINK1P00995 79 aa11.56□□□□□ -0.56
CRAT-207ENST00000458362 SACSQ9NZJ4 4579 aa11.5□□□□□ -0.57
CRAT-207ENST00000458362 LINC00304Q8N9R0 145 aa11.47□□□□□ -0.57
CRAT-207ENST00000458362 A6NN06 94 aa11.46□□□□□ -0.57
CRAT-207ENST00000458362 RPS29P62273 56 aaKnown RBP11.44□□□□□ -0.58
CRAT-207ENST00000458362 SMR3BP02814 79 aaPredicted RBP11.43□□□□□ -0.58
CRAT-207ENST00000458362 C7orf65Q6ZTY9 151 aa11.42□□□□□ -0.58
CRAT-207ENST00000458362 DYNC1H1Q14204 4646 aaKnown RBP11.39□□□□□ -0.59
CRAT-207ENST00000458362 A0A1B0GU69 56 aa11.39□□□□□ -0.59
CRAT-207ENST00000458362 KTN1-AS1Q86SY8 53 aa11.36□□□□□ -0.59
CRAT-207ENST00000458362 A0A1B0GVY2 172 aa11.31□□□□□ -0.6
CRAT-207ENST00000458362 Q8N1X5 172 aa11.31□□□□□ -0.6
CRAT-207ENST00000458362 KRTAP10-4P60372 401 aaPredicted RBP11.3□□□□□ -0.6
CRAT-207ENST00000458362 C9orf92A6NGG3 77 aa11.28□□□□□ -0.6
CRAT-207ENST00000458362 PKHD1L1Q86WI1 4243 aa11.28□□□□□ -0.6
CRAT-207ENST00000458362 SEC61GP60059 68 aa11.28□□□□□ -0.6
CRAT-207ENST00000458362 APOBP04114 4563 aaKnown RBP11.26□□□□□ -0.61
CRAT-207ENST00000458362 FAT1Q14517 4588 aa11.26□□□□□ -0.61
CRAT-207ENST00000458362 SPATA8Q6RVD6 105 aa11.22□□□□□ -0.61
CRAT-207ENST00000458362 A8MUU9 505 aa11.21□□□□□ -0.61
CRAT-207ENST00000458362 C20orf166-AS1Q96NR2 134 aa11.21□□□□□ -0.62
CRAT-207ENST00000458362 UQCR11O14957 56 aa11.16□□□□□ -0.62
CRAT-207ENST00000458362 MIR22HGQ0VDD5 57 aa11.16□□□□□ -0.62
CRAT-207ENST00000458362 RYR2Q92736 4967 aa11.13□□□□□ -0.63
CRAT-207ENST00000458362 RBM12B-AS1Q9P1G2 102 aa11.1□□□□□ -0.63
CRAT-207ENST00000458362 KRTAP3-1Q9BYR8 98 aa11.1□□□□□ -0.63
CRAT-207ENST00000458362 FLG2Q5D862 2391 aaPredicted RBP11.02□□□□□ -0.65
CRAT-207ENST00000458362 KMT2CQ8NEZ4 4911 aaKnown RBP11□□□□□ -0.65
CRAT-207ENST00000458362 ADM2Q7Z4H4 148 aa10.96□□□□□ -0.65
CRAT-207ENST00000458362 PRAC1Q96KF2 57 aa10.96□□□□□ -0.65
CRAT-207ENST00000458362 TNXBP22105 4242 aa10.89□□□□□ -0.67
CRAT-207ENST00000458362 FAT3Q8TDW7 4589 aa10.87□□□□□ -0.67
CRAT-207ENST00000458362 H0YAA0 97 aa10.86□□□□□ -0.67
CRAT-207ENST00000458362 LRP1Q07954 4544 aaKnown RBP10.85□□□□□ -0.67
CRAT-207ENST00000458362 COX6B2Q6YFQ2 88 aa10.85□□□□□ -0.67
CRAT-207ENST00000458362 KRTAP10-8P60410 259 aa10.84□□□□□ -0.67
CRAT-207ENST00000458362 HSPG2P98160 4391 aa10.79□□□□□ -0.68
CRAT-207ENST00000458362 A0A1B0GU33 70 aa10.79□□□□□ -0.68
CRAT-207ENST00000458362 H1FX-AS1Q4G0G2 97 aa10.77□□□□□ -0.69
CRAT-207ENST00000458362 Q5VSD8 79 aa10.77□□□□□ -0.69
CRAT-207ENST00000458362 DMBT1Q9UGM3 2413 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms