RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 SPINK6Q6UWN8 80 aa8.13□□□□□ -1.11
PTPRE-204ENST00000455661 NBDYA0A0U1RRE5 68 aa8.12□□□□□ -1.11
PTPRE-204ENST00000455661 FBN1P35555 2871 aaKnown RBP8.11□□□□□ -1.11
PTPRE-204ENST00000455661 KRTAP13-3Q3SY46 172 aa8.11□□□□□ -1.11
PTPRE-204ENST00000455661 ANAPC11Q9NYG5 84 aa8.11□□□□□ -1.11
PTPRE-204ENST00000455661 LYSTQ99698 3801 aa8.11□□□□□ -1.11
PTPRE-204ENST00000455661 NOTCH1P46531 2555 aa8.09□□□□□ -1.11
PTPRE-204ENST00000455661 PSORS1C2Q9UIG4 136 aa8.09□□□□□ -1.11
PTPRE-204ENST00000455661 IGLV5-52A0A0A0MRZ9 124 aa8.09□□□□□ -1.11
PTPRE-204ENST00000455661 ZNF861PO60384 105 aa8.09□□□□□ -1.11
PTPRE-204ENST00000455661 STAB1Q9NY15 2570 aa8.08□□□□□ -1.12
PTPRE-204ENST00000455661 LINC00313P59037 77 aa8.08□□□□□ -1.12
PTPRE-204ENST00000455661 Q6ZRN7 208 aaPredicted RBP8.08□□□□□ -1.12
PTPRE-204ENST00000455661 DMAC1Q96GE9 116 aa8.07□□□□□ -1.12
PTPRE-204ENST00000455661 A0A1B0GU69 56 aa8.07□□□□□ -1.12
PTPRE-204ENST00000455661 C8orf87E5RJ46 101 aa8.07□□□□□ -1.12
PTPRE-204ENST00000455661 NBEAL1Q6ZS30 2694 aa8.06□□□□□ -1.12
PTPRE-204ENST00000455661 CSMD3Q7Z407 3707 aa8.04□□□□□ -1.12
PTPRE-204ENST00000455661 COL6A5A8TX70 2615 aa8.03□□□□□ -1.12
PTPRE-204ENST00000455661 CIRBP-AS1Q8TBR5 109 aa8.03□□□□□ -1.12
PTPRE-204ENST00000455661 PLA2G1BP04054 148 aaKnown RBP8.02□□□□□ -1.13
PTPRE-204ENST00000455661 ALMS1Q8TCU4 4167 aa8.02□□□□□ -1.13
PTPRE-204ENST00000455661 FAM229AH3BQW9 127 aa8.01□□□□□ -1.13
PTPRE-204ENST00000455661 SPATA8Q6RVD6 105 aa8.01□□□□□ -1.13
PTPRE-204ENST00000455661 PRAC1Q96KF2 57 aa8.01□□□□□ -1.13
PTPRE-204ENST00000455661 A0A087WTM6 91 aa8□□□□□ -1.13
PTPRE-204ENST00000455661 RTL8CO15255 209 aa7.99□□□□□ -1.13
PTPRE-204ENST00000455661 COL7A1Q02388 2944 aa7.98□□□□□ -1.13
PTPRE-204ENST00000455661 UQCR11O14957 56 aa7.97□□□□□ -1.13
PTPRE-204ENST00000455661 MIR22HGQ0VDD5 57 aa7.97□□□□□ -1.13
PTPRE-204ENST00000455661 NUPR2A6NF83 97 aa7.96□□□□□ -1.13
PTPRE-204ENST00000455661 IGKV2-30P06310 120 aa7.96□□□□□ -1.14
PTPRE-204ENST00000455661 SSBP3-AS1Q7Z2R9 100 aa7.96□□□□□ -1.14
PTPRE-204ENST00000455661 RETNLBQ9BQ08 111 aa7.96□□□□□ -1.14
PTPRE-204ENST00000455661 ADM2Q7Z4H4 148 aa7.95□□□□□ -1.14
PTPRE-204ENST00000455661 IGLV7-43P04211 117 aa7.94□□□□□ -1.14
PTPRE-204ENST00000455661 DYNC2H1Q8NCM8 4307 aaKnown RBP7.92□□□□□ -1.14
PTPRE-204ENST00000455661 DNAH7Q8WXX0 4024 aa7.92□□□□□ -1.14
PTPRE-204ENST00000455661 STAB2Q8WWQ8 2551 aa7.92□□□□□ -1.14
PTPRE-204ENST00000455661 LINC01554Q52M75 96 aa7.91□□□□□ -1.14
PTPRE-204ENST00000455661 DNAH8Q96JB1 4490 aa7.9□□□□□ -1.14
PTPRE-204ENST00000455661 FRAS1Q86XX4 4008 aa7.87□□□□□ -1.15
PTPRE-204ENST00000455661 PLECQ15149 4684 aaKnown RBP7.85□□□□□ -1.15
PTPRE-204ENST00000455661 IGKV2D-30A0A075B6S6 120 aa7.84□□□□□ -1.15
PTPRE-204ENST00000455661 H3BS24 57 aa7.84□□□□□ -1.15
PTPRE-204ENST00000455661 KRTAP16-1A8MUX0 517 aa7.81□□□□□ -1.16
PTPRE-204ENST00000455661 HECTD4Q9Y4D8 3996 aa7.79□□□□□ -1.16
PTPRE-204ENST00000455661 MGAM2Q2M2H8 2515 aa7.78□□□□□ -1.16
PTPRE-204ENST00000455661 CSAG1Q6PB30 78 aa7.77□□□□□ -1.17
PTPRE-204ENST00000455661 KRTAP13-2Q52LG2 175 aa7.74□□□□□ -1.17
PTPRE-204ENST00000455661 VPS13DQ5THJ4 4388 aa7.74□□□□□ -1.17
PTPRE-204ENST00000455661 C1orf134Q5TEV5 83 aa7.74□□□□□ -1.17
PTPRE-204ENST00000455661 DNAH17Q9UFH2 4485 aa7.73□□□□□ -1.17
PTPRE-204ENST00000455661 SPINK1P00995 79 aa7.72□□□□□ -1.17
PTPRE-204ENST00000455661 STARD9Q9P2P6 4700 aa7.66□□□□□ -1.18
PTPRE-204ENST00000455661 LY6G6CO95867 125 aa7.66□□□□□ -1.18
PTPRE-204ENST00000455661 Q8N1X5 172 aa7.66□□□□□ -1.18
PTPRE-204ENST00000455661 DNAH2Q9P225 4427 aa7.63□□□□□ -1.19
PTPRE-204ENST00000455661 PRKDCP78527 4128 aaKnown RBP7.6□□□□□ -1.19
PTPRE-204ENST00000455661 KMT2AQ03164 3969 aa7.6□□□□□ -1.19
PTPRE-204ENST00000455661 Q6ZSA8 131 aa7.59□□□□□ -1.19
PTPRE-204ENST00000455661 KRTAP1-4P0C5Y4 121 aa7.58□□□□□ -1.2
PTPRE-204ENST00000455661 KRTAP10-2P60368 255 aa7.58□□□□□ -1.2
PTPRE-204ENST00000455661 FBN3Q75N90 2809 aa7.58□□□□□ -1.2
PTPRE-204ENST00000455661 TGP01266 2768 aa7.58□□□□□ -1.2
PTPRE-204ENST00000455661 A8MUU9 505 aa7.58□□□□□ -1.2
PTPRE-204ENST00000455661 H0YAA0 97 aa7.57□□□□□ -1.2
PTPRE-204ENST00000455661 TYMSOSQ8TAI1 123 aa7.57□□□□□ -1.2
PTPRE-204ENST00000455661 MEGF8Q7Z7M0 2845 aa7.57□□□□□ -1.2
PTPRE-204ENST00000455661 DNAH11Q96DT5 4516 aa7.57□□□□□ -1.2
PTPRE-204ENST00000455661 A0A1B0GU33 70 aa7.53□□□□□ -1.2
PTPRE-204ENST00000455661 KRTAP25-1Q3LHN0 102 aa7.53□□□□□ -1.2
PTPRE-204ENST00000455661 LINC00304Q8N9R0 145 aa7.52□□□□□ -1.2
PTPRE-204ENST00000455661 KRTAP10-1P60331 282 aa7.5□□□□□ -1.21
PTPRE-204ENST00000455661 DNAH6Q9C0G6 4158 aa7.49□□□□□ -1.21
PTPRE-204ENST00000455661 H1FX-AS1Q4G0G2 97 aa7.49□□□□□ -1.21
PTPRE-204ENST00000455661 DNAH5Q8TE73 4624 aa7.47□□□□□ -1.21
PTPRE-204ENST00000455661 LCE2BO14633 110 aa7.46□□□□□ -1.22
PTPRE-204ENST00000455661 RPS29P62273 56 aaKnown RBP7.45□□□□□ -1.22
PTPRE-204ENST00000455661 K7ERS5 55 aa7.44□□□□□ -1.22
PTPRE-204ENST00000455661 LRP1BQ9NZR2 4599 aa7.41□□□□□ -1.22
PTPRE-204ENST00000455661 ROMO1P60602 79 aa7.4□□□□□ -1.22
PTPRE-204ENST00000455661 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
PTPRE-204ENST00000455661 LCE2CQ5TA81 110 aa7.4□□□□□ -1.23
PTPRE-204ENST00000455661 C20orf166-AS1Q96NR2 134 aa7.39□□□□□ -1.23
PTPRE-204ENST00000455661 C9orf92A6NGG3 77 aa7.38□□□□□ -1.23
PTPRE-204ENST00000455661 VPS13BQ7Z7G8 4022 aa7.34□□□□□ -1.23
PTPRE-204ENST00000455661 COX6B2Q6YFQ2 88 aa7.32□□□□□ -1.24
PTPRE-204ENST00000455661 LCE2AQ5TA79 106 aaPredicted RBP7.32□□□□□ -1.24
PTPRE-204ENST00000455661 CRIPTQ9P021 101 aa7.3□□□□□ -1.24
PTPRE-204ENST00000455661 PKD1P98161 4303 aa7.29□□□□□ -1.24
PTPRE-204ENST00000455661 RPL37P61927 97 aaKnown RBP7.21□□□□□ -1.26
PTPRE-204ENST00000455661 FLG2Q5D862 2391 aaPredicted RBP7.21□□□□□ -1.26
PTPRE-204ENST00000455661 FAT2Q9NYQ8 4349 aa7.2□□□□□ -1.26
PTPRE-204ENST00000455661 SACSQ9NZJ4 4579 aa7.18□□□□□ -1.26
PTPRE-204ENST00000455661 P0C880 135 aa7.16□□□□□ -1.26
PTPRE-204ENST00000455661 A0A0A0MQY5 61 aa7.14□□□□□ -1.27
PTPRE-204ENST00000455661 SMR3BP02814 79 aaPredicted RBP7.14□□□□□ -1.27
PTPRE-204ENST00000455661 HYDINQ4G0P3 5121 aa7.13□□□□□ -1.27
PTPRE-204ENST00000455661 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms