RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 LINC00472Q9H8W2 130 aa6.73□□□□□ -1.33
DDR1-239ENST00000452441 MRPL34Q9BQ48 92 aaKnown RBP6.73□□□□□ -1.33
DDR1-239ENST00000452441 A8MU10 97 aa6.72□□□□□ -1.33
DDR1-239ENST00000452441 A0A1B0GVX0 72 aa6.72□□□□□ -1.33
DDR1-239ENST00000452441 MMP24-AS1A0A0U1RRL7 71 aa6.71□□□□□ -1.33
DDR1-239ENST00000452441 C9orf92A6NGG3 77 aa6.7□□□□□ -1.34
DDR1-239ENST00000452441 KRTAP10-1P60331 282 aa6.69□□□□□ -1.34
DDR1-239ENST00000452441 SPRR1BP22528 89 aa6.69□□□□□ -1.34
DDR1-239ENST00000452441 LINC00313P59037 77 aa6.68□□□□□ -1.34
DDR1-239ENST00000452441 H3BPC8 53 aa6.67□□□□□ -1.34
DDR1-239ENST00000452441 STARD9Q9P2P6 4700 aa6.67□□□□□ -1.34
DDR1-239ENST00000452441 Q8N9P0 234 aaPredicted RBP6.67□□□□□ -1.34
DDR1-239ENST00000452441 DYNC2H1Q8NCM8 4307 aaKnown RBP6.66□□□□□ -1.34
DDR1-239ENST00000452441 Q6ZR54 194 aa6.66□□□□□ -1.34
DDR1-239ENST00000452441 CD164Q04900 197 aa6.66□□□□□ -1.34
DDR1-239ENST00000452441 Q96NJ1 140 aa6.66□□□□□ -1.34
DDR1-239ENST00000452441 PLAC8Q9NZF1 115 aa6.66□□□□□ -1.34
DDR1-239ENST00000452441 SPANXA2-OT1Q8N9U9 137 aa6.66□□□□□ -1.34
DDR1-239ENST00000452441 DNHD1Q96M86 4753 aa6.65□□□□□ -1.34
DDR1-239ENST00000452441 Q5VV11 94 aa6.64□□□□□ -1.35
DDR1-239ENST00000452441 TP53AIP1Q9HCN2 124 aa6.64□□□□□ -1.35
DDR1-239ENST00000452441 PRKDCP78527 4128 aaKnown RBP6.64□□□□□ -1.35
DDR1-239ENST00000452441 FRAS1Q86XX4 4008 aa6.62□□□□□ -1.35
DDR1-239ENST00000452441 LIMD2Q9BT23 127 aa6.62□□□□□ -1.35
DDR1-239ENST00000452441 KMT2AQ03164 3969 aa6.61□□□□□ -1.35
DDR1-239ENST00000452441 C7orf65Q6ZTY9 151 aa6.6□□□□□ -1.35
DDR1-239ENST00000452441 Q5W150 140 aa6.59□□□□□ -1.35
DDR1-239ENST00000452441 KRTAP13-1Q8IUC0 172 aa6.59□□□□□ -1.35
DDR1-239ENST00000452441 Q8N1X5 172 aa6.59□□□□□ -1.35
DDR1-239ENST00000452441 IGLV7-46A0A075B6I9 117 aa6.59□□□□□ -1.35
DDR1-239ENST00000452441 SSBP3-AS1Q7Z2R9 100 aa6.58□□□□□ -1.36
DDR1-239ENST00000452441 DNAH2Q9P225 4427 aa6.58□□□□□ -1.36
DDR1-239ENST00000452441 HECTD4Q9Y4D8 3996 aa6.58□□□□□ -1.36
DDR1-239ENST00000452441 VPS13DQ5THJ4 4388 aa6.57□□□□□ -1.36
DDR1-239ENST00000452441 DNAH8Q96JB1 4490 aa6.56□□□□□ -1.36
DDR1-239ENST00000452441 LINC00304Q8N9R0 145 aa6.54□□□□□ -1.36
DDR1-239ENST00000452441 A0A1B0GU69 56 aa6.54□□□□□ -1.36
DDR1-239ENST00000452441 HRES1P13985 223 aa6.54□□□□□ -1.36
DDR1-239ENST00000452441 ACYP2P14621 99 aa6.54□□□□□ -1.36
DDR1-239ENST00000452441 FAM229AH3BQW9 127 aa6.52□□□□□ -1.36
DDR1-239ENST00000452441 LOC101927531A0A1B0GV80 90 aa6.52□□□□□ -1.37
DDR1-239ENST00000452441 DNAH17Q9UFH2 4485 aa6.52□□□□□ -1.37
DDR1-239ENST00000452441 SPINK7P58062 85 aa6.51□□□□□ -1.37
DDR1-239ENST00000452441 LINC00483Q53H64 154 aa6.5□□□□□ -1.37
DDR1-239ENST00000452441 LCA10Q71F78 164 aa6.5□□□□□ -1.37
DDR1-239ENST00000452441 Q75L30 129 aa6.49□□□□□ -1.37
DDR1-239ENST00000452441 ASB16-AS1Q495Z4 193 aa6.49□□□□□ -1.37
DDR1-239ENST00000452441 DNAH6Q9C0G6 4158 aa6.48□□□□□ -1.37
DDR1-239ENST00000452441 ATP11AUNQ6ZP68 121 aa6.48□□□□□ -1.37
DDR1-239ENST00000452441 C8orf87E5RJ46 101 aa6.46□□□□□ -1.38
DDR1-239ENST00000452441 KTN1-AS1Q86SY8 53 aa6.46□□□□□ -1.38
DDR1-239ENST00000452441 RBM12B-AS1Q9P1G2 102 aa6.45□□□□□ -1.38
DDR1-239ENST00000452441 LINC01558Q9Y6Z2 57 aa6.44□□□□□ -1.38
DDR1-239ENST00000452441 KRTAP13-2Q52LG2 175 aa6.44□□□□□ -1.38
DDR1-239ENST00000452441 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
DDR1-239ENST00000452441 ALMS1Q8TCU4 4167 aa6.4□□□□□ -1.38
DDR1-239ENST00000452441 DNAH11Q96DT5 4516 aa6.4□□□□□ -1.38
DDR1-239ENST00000452441 PRAC1Q96KF2 57 aa6.4□□□□□ -1.39
DDR1-239ENST00000452441 DNAH5Q8TE73 4624 aa6.38□□□□□ -1.39
DDR1-239ENST00000452441 HYDINQ4G0P3 5121 aa6.34□□□□□ -1.39
DDR1-239ENST00000452441 LRP1BQ9NZR2 4599 aa6.34□□□□□ -1.39
DDR1-239ENST00000452441 A6NN06 94 aa6.33□□□□□ -1.4
DDR1-239ENST00000452441 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
DDR1-239ENST00000452441 KRTAP13-3Q3SY46 172 aa6.31□□□□□ -1.4
DDR1-239ENST00000452441 CRIPTQ9P021 101 aa6.31□□□□□ -1.4
DDR1-239ENST00000452441 Q5VSD8 79 aa6.31□□□□□ -1.4
DDR1-239ENST00000452441 UQCR11O14957 56 aa6.3□□□□□ -1.4
DDR1-239ENST00000452441 K7ERS5 55 aa6.3□□□□□ -1.4
DDR1-239ENST00000452441 H3BS24 57 aa6.29□□□□□ -1.4
DDR1-239ENST00000452441 A0A0D9SG42 100 aa6.28□□□□□ -1.4
DDR1-239ENST00000452441 ADM2Q7Z4H4 148 aa6.28□□□□□ -1.4
DDR1-239ENST00000452441 DMAC1Q96GE9 116 aa6.28□□□□□ -1.4
DDR1-239ENST00000452441 PKD1P98161 4303 aa6.26□□□□□ -1.41
DDR1-239ENST00000452441 J3QL48 77 aa6.26□□□□□ -1.41
DDR1-239ENST00000452441 Q6ZSA8 131 aa6.26□□□□□ -1.41
DDR1-239ENST00000452441 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
DDR1-239ENST00000452441 FAT2Q9NYQ8 4349 aa6.25□□□□□ -1.41
DDR1-239ENST00000452441 VPS13BQ7Z7G8 4022 aa6.22□□□□□ -1.41
DDR1-239ENST00000452441 PKHD1P08F94 4074 aa6.19□□□□□ -1.42
DDR1-239ENST00000452441 SPATA8Q6RVD6 105 aa6.18□□□□□ -1.42
DDR1-239ENST00000452441 FAT1Q14517 4588 aa6.18□□□□□ -1.42
DDR1-239ENST00000452441 LINC01554Q52M75 96 aa6.17□□□□□ -1.42
DDR1-239ENST00000452441 KRTAP16-1A8MUX0 517 aa6.16□□□□□ -1.42
DDR1-239ENST00000452441 KRTAP21-3Q3LHN1 58 aa6.12□□□□□ -1.43
DDR1-239ENST00000452441 A0A1B0GU33 70 aa6.11□□□□□ -1.43
DDR1-239ENST00000452441 CSAG1Q6PB30 78 aa6.11□□□□□ -1.43
DDR1-239ENST00000452441 SPINT4Q6UDR6 99 aa6.1□□□□□ -1.43
DDR1-239ENST00000452441 COX6B2Q6YFQ2 88 aa6.06□□□□□ -1.44
DDR1-239ENST00000452441 MYCBP2O75592 4640 aa6.06□□□□□ -1.44
DDR1-239ENST00000452441 SACSQ9NZJ4 4579 aa6.05□□□□□ -1.44
DDR1-239ENST00000452441 DYNC1H1Q14204 4646 aaKnown RBP6.02□□□□□ -1.44
DDR1-239ENST00000452441 A0A1B0GVY2 172 aa5.99□□□□□ -1.45
DDR1-239ENST00000452441 KMT2CQ8NEZ4 4911 aaKnown RBP5.98□□□□□ -1.45
DDR1-239ENST00000452441 RPS29P62273 56 aaKnown RBP5.93□□□□□ -1.46
DDR1-239ENST00000452441 APOBP04114 4563 aaKnown RBP5.92□□□□□ -1.46
DDR1-239ENST00000452441 H1FX-AS1Q4G0G2 97 aa5.92□□□□□ -1.46
DDR1-239ENST00000452441 A8MUU9 505 aa5.92□□□□□ -1.46
DDR1-239ENST00000452441 LRP1Q07954 4544 aaKnown RBP5.91□□□□□ -1.46
DDR1-239ENST00000452441 FAT3Q8TDW7 4589 aa5.91□□□□□ -1.46
DDR1-239ENST00000452441 H0YAA0 97 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms