RNA–Protein interactions for RNA: ENST00000452015.8

PPP1R3E-201, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3E, Length 4,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-201ENST00000452015 Q1T7F1 81 aa9.99□□□□□ -0.81
PPP1R3E-201ENST00000452015 A0A087X002 238 aa9.98□□□□□ -0.81
PPP1R3E-201ENST00000452015 ZCCHC13Q8WW36 166 aaKnown RBP9.98□□□□□ -0.81
PPP1R3E-201ENST00000452015 Q5XG85 94 aa9.98□□□□□ -0.81
PPP1R3E-201ENST00000452015 PKD1L1Q8TDX9 2849 aa9.97□□□□□ -0.81
PPP1R3E-201ENST00000452015 LINC01554Q52M75 96 aa9.93□□□□□ -0.82
PPP1R3E-201ENST00000452015 Q5W150 140 aa9.92□□□□□ -0.82
PPP1R3E-201ENST00000452015 PDZD2O15018 2839 aa9.92□□□□□ -0.82
PPP1R3E-201ENST00000452015 FBN1P35555 2871 aaKnown RBP9.92□□□□□ -0.82
PPP1R3E-201ENST00000452015 SMG1Q96Q15 3661 aaKnown RBP9.91□□□□□ -0.82
PPP1R3E-201ENST00000452015 KRTAP21-3Q3LHN1 58 aa9.89□□□□□ -0.83
PPP1R3E-201ENST00000452015 OTOGQ6ZRI0 2925 aa9.89□□□□□ -0.83
PPP1R3E-201ENST00000452015 FP248Q71RG6 208 aaPredicted RBP9.87□□□□□ -0.83
PPP1R3E-201ENST00000452015 SPINK7P58062 85 aa9.87□□□□□ -0.83
PPP1R3E-201ENST00000452015 A0A0D9SG42 100 aa9.86□□□□□ -0.83
PPP1R3E-201ENST00000452015 TENM2Q9NT68 2774 aa9.83□□□□□ -0.84
PPP1R3E-201ENST00000452015 OXTP01178 125 aa9.83□□□□□ -0.84
PPP1R3E-201ENST00000452015 NBPF19A0A087WUL8 3843 aa9.81□□□□□ -0.84
PPP1R3E-201ENST00000452015 ZFHX3Q15911 3703 aa9.8□□□□□ -0.84
PPP1R3E-201ENST00000452015 VWFP04275 2813 aa9.8□□□□□ -0.84
PPP1R3E-201ENST00000452015 Q75L30 129 aa9.79□□□□□ -0.84
PPP1R3E-201ENST00000452015 NOTCH2NLQ7Z3S9 236 aa9.78□□□□□ -0.84
PPP1R3E-201ENST00000452015 KRTAP29-1A8MX34 341 aaPredicted RBP9.78□□□□□ -0.84
PPP1R3E-201ENST00000452015 PRAC1Q96KF2 57 aa9.78□□□□□ -0.84
PPP1R3E-201ENST00000452015 KRTAP13-1Q8IUC0 172 aa9.76□□□□□ -0.85
PPP1R3E-201ENST00000452015 CSMD1Q96PZ7 3565 aa9.75□□□□□ -0.85
PPP1R3E-201ENST00000452015 LUZP6Q538Z0 58 aa9.75□□□□□ -0.85
PPP1R3E-201ENST00000452015 KRTAP13-2Q52LG2 175 aa9.71□□□□□ -0.86
PPP1R3E-201ENST00000452015 TGP01266 2768 aa9.7□□□□□ -0.86
PPP1R3E-201ENST00000452015 A0A1B0GU33 70 aa9.7□□□□□ -0.86
PPP1R3E-201ENST00000452015 M0R2T5 61 aa9.69□□□□□ -0.86
PPP1R3E-201ENST00000452015 SEC61BP60468 96 aaKnown RBP9.68□□□□□ -0.86
PPP1R3E-201ENST00000452015 CSAG1Q6PB30 78 aa9.67□□□□□ -0.86
PPP1R3E-201ENST00000452015 SVEP1Q4LDE5 3571 aa9.67□□□□□ -0.86
PPP1R3E-201ENST00000452015 LINC01558Q9Y6Z2 57 aa9.66□□□□□ -0.86
PPP1R3E-201ENST00000452015 Q5VV11 94 aa9.65□□□□□ -0.86
PPP1R3E-201ENST00000452015 S4R3F8 94 aa9.64□□□□□ -0.87
PPP1R3E-201ENST00000452015 CSMD2Q7Z408 3487 aa9.62□□□□□ -0.87
PPP1R3E-201ENST00000452015 ASB16-AS1Q495Z4 193 aa9.61□□□□□ -0.87
PPP1R3E-201ENST00000452015 CUBNO60494 3623 aa9.6□□□□□ -0.87
PPP1R3E-201ENST00000452015 DMAC1Q96GE9 116 aa9.58□□□□□ -0.88
PPP1R3E-201ENST00000452015 SPENQ96T58 3664 aaKnown RBP9.55□□□□□ -0.88
PPP1R3E-201ENST00000452015 RPS29P62273 56 aaKnown RBP9.54□□□□□ -0.88
PPP1R3E-201ENST00000452015 A0A0A0MQY5 61 aa9.53□□□□□ -0.88
PPP1R3E-201ENST00000452015 CAMK2N1Q7Z7J9 78 aa9.5□□□□□ -0.89
PPP1R3E-201ENST00000452015 R4GN34 69 aa9.45□□□□□ -0.9
PPP1R3E-201ENST00000452015 SRRM2Q9UQ35 2752 aaKnown RBP9.41□□□□□ -0.9
PPP1R3E-201ENST00000452015 KRTAP1-4P0C5Y4 121 aa9.37□□□□□ -0.91
PPP1R3E-201ENST00000452015 BSNQ9UPA5 3926 aa9.3□□□□□ -0.92
PPP1R3E-201ENST00000452015 M0QZ58 72 aa9.29□□□□□ -0.92
PPP1R3E-201ENST00000452015 RPL37P61927 97 aaKnown RBP9.28□□□□□ -0.92
PPP1R3E-201ENST00000452015 KRTAP16-1A8MUX0 517 aa9.28□□□□□ -0.92
PPP1R3E-201ENST00000452015 H1FX-AS1Q4G0G2 97 aa9.28□□□□□ -0.92
PPP1R3E-201ENST00000452015 ADM2Q7Z4H4 148 aa9.27□□□□□ -0.93
PPP1R3E-201ENST00000452015 SPATA8Q6RVD6 105 aa9.26□□□□□ -0.93
PPP1R3E-201ENST00000452015 TRRAPQ9Y4A5 3859 aa9.25□□□□□ -0.93
PPP1R3E-201ENST00000452015 ANK3Q12955 4377 aaKnown RBP9.21□□□□□ -0.94
PPP1R3E-201ENST00000452015 A8MUU9 505 aa9.2□□□□□ -0.94
PPP1R3E-201ENST00000452015 C20orf166-AS1Q96NR2 134 aa9.18□□□□□ -0.94
PPP1R3E-201ENST00000452015 A6NN06 94 aa9.17□□□□□ -0.94
PPP1R3E-201ENST00000452015 ROMO1P60602 79 aa9.17□□□□□ -0.94
PPP1R3E-201ENST00000452015 FBN3Q75N90 2809 aa9.13□□□□□ -0.95
PPP1R3E-201ENST00000452015 A8MU10 97 aa9.12□□□□□ -0.95
PPP1R3E-201ENST00000452015 XP32Q5T750 250 aa9.07□□□□□ -0.96
PPP1R3E-201ENST00000452015 A0A1B0GVY2 172 aa9.02□□□□□ -0.97
PPP1R3E-201ENST00000452015 KRTAP25-1Q3LHN0 102 aa9□□□□□ -0.97
PPP1R3E-201ENST00000452015 NDUFAF8A1L188 74 aa8.97□□□□□ -0.97
PPP1R3E-201ENST00000452015 MEGF8Q7Z7M0 2845 aa8.97□□□□□ -0.97
PPP1R3E-201ENST00000452015 COL7A1Q02388 2944 aa8.96□□□□□ -0.98
PPP1R3E-201ENST00000452015 PLAC4Q8WY50 150 aa8.95□□□□□ -0.98
PPP1R3E-201ENST00000452015 TPRXLQ17RH7 258 aa8.89□□□□□ -0.99
PPP1R3E-201ENST00000452015 KRTAP10-8P60410 259 aa8.85□□□□□ -0.99
PPP1R3E-201ENST00000452015 KRTAP13-3Q3SY46 172 aa8.85□□□□□ -0.99
PPP1R3E-201ENST00000452015 VPS13CQ709C8 3753 aa8.81□□□□□ -1
PPP1R3E-201ENST00000452015 ZNF469Q96JG9 3925 aaPredicted RBP8.72□□□□□ -1.01
PPP1R3E-201ENST00000452015 H0YAA0 97 aa8.55□□□□□ -1.04
PPP1R3E-201ENST00000452015 P0C880 135 aa8.54□□□□□ -1.04
PPP1R3E-201ENST00000452015 HUWE1Q7Z6Z7 4374 aaKnown RBP8.51□□□□□ -1.05
PPP1R3E-201ENST00000452015 TNP1P09430 55 aa8.49□□□□□ -1.05
PPP1R3E-201ENST00000452015 KRTAP10-10P60014 251 aa8.45□□□□□ -1.06
PPP1R3E-201ENST00000452015 AKAP9Q99996 3911 aa8.41□□□□□ -1.06
PPP1R3E-201ENST00000452015 CSMD3Q7Z407 3707 aa8.39□□□□□ -1.07
PPP1R3E-201ENST00000452015 C10orf95Q9H7T3 257 aa8.35□□□□□ -1.07
PPP1R3E-201ENST00000452015 KRTAP3-1Q9BYR8 98 aa8.31□□□□□ -1.08
PPP1R3E-201ENST00000452015 MT1HL1P0DM35 61 aa8.31□□□□□ -1.08
PPP1R3E-201ENST00000452015 DNHD1Q96M86 4753 aa8.29□□□□□ -1.08
PPP1R3E-201ENST00000452015 KRTAP10-4P60372 401 aaPredicted RBP8.24□□□□□ -1.09
PPP1R3E-201ENST00000452015 DNAH9Q9NYC9 4486 aa8.24□□□□□ -1.09
PPP1R3E-201ENST00000452015 KRTAP4-5Q9BYR2 181 aa8.21□□□□□ -1.1
PPP1R3E-201ENST00000452015 PP632Q6XCG6 107 aa8.16□□□□□ -1.1
PPP1R3E-201ENST00000452015 KRTAP12-2P59991 146 aa8.09□□□□□ -1.12
PPP1R3E-201ENST00000452015 DNAH5Q8TE73 4624 aa8.07□□□□□ -1.12
PPP1R3E-201ENST00000452015 PLECQ15149 4684 aaKnown RBP8.07□□□□□ -1.12
PPP1R3E-201ENST00000452015 PRO2289Q9P1D8 64 aa8.06□□□□□ -1.12
PPP1R3E-201ENST00000452015 KRTAP12-1P59990 96 aa7.98□□□□□ -1.13
PPP1R3E-201ENST00000452015 KRTAP10-6P60371 365 aaPredicted RBP7.97□□□□□ -1.13
PPP1R3E-201ENST00000452015 DNAH11Q96DT5 4516 aa7.97□□□□□ -1.13
PPP1R3E-201ENST00000452015 DNAH1Q9P2D7 4330 aa7.94□□□□□ -1.14
PPP1R3E-201ENST00000452015 KRTAP13-4Q3LI77 160 aa7.94□□□□□ -1.14
PPP1R3E-201ENST00000452015 ALMS1Q8TCU4 4167 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms