RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 FREM2Q5SZK8 3169 aa6.79□□□□□ -1.32
AC006001.3-201ENST00000449307 VPS13AQ96RL7 3174 aa6.78□□□□□ -1.32
AC006001.3-201ENST00000449307 MAP1AP78559 2803 aaPredicted RBP6.76□□□□□ -1.33
AC006001.3-201ENST00000449307 KRTAP1-4P0C5Y4 121 aa6.74□□□□□ -1.33
AC006001.3-201ENST00000449307 DNAH14Q0VDD8 3507 aa6.72□□□□□ -1.33
AC006001.3-201ENST00000449307 VCANP13611 3396 aa6.7□□□□□ -1.34
AC006001.3-201ENST00000449307 APCP25054 2843 aa6.69□□□□□ -1.34
AC006001.3-201ENST00000449307 CFAP47Q6ZTR5 3102 aa6.69□□□□□ -1.34
AC006001.3-201ENST00000449307 SZT2Q5T011 3432 aa6.68□□□□□ -1.34
AC006001.3-201ENST00000449307 UTP20O75691 2785 aaKnown RBP6.67□□□□□ -1.34
AC006001.3-201ENST00000449307 ITPR1Q14643 2758 aa6.66□□□□□ -1.34
AC006001.3-201ENST00000449307 TACC2O95359 2948 aa6.65□□□□□ -1.34
AC006001.3-201ENST00000449307 KALRNO60229 2985 aa6.65□□□□□ -1.34
AC006001.3-201ENST00000449307 SPEGQ15772 3267 aa6.64□□□□□ -1.35
AC006001.3-201ENST00000449307 LRBAP50851 2863 aa6.64□□□□□ -1.35
AC006001.3-201ENST00000449307 DMXL2Q8TDJ6 3036 aa6.63□□□□□ -1.35
AC006001.3-201ENST00000449307 HIVEP1P15822 2718 aa6.63□□□□□ -1.35
AC006001.3-201ENST00000449307 TENM4Q6N022 2769 aa6.62□□□□□ -1.35
AC006001.3-201ENST00000449307 KRTAP13-3Q3SY46 172 aa6.62□□□□□ -1.35
AC006001.3-201ENST00000449307 FRYLO94915 3013 aa6.61□□□□□ -1.35
AC006001.3-201ENST00000449307 COL12A1Q99715 3063 aa6.6□□□□□ -1.35
AC006001.3-201ENST00000449307 LAMA1P25391 3075 aa6.6□□□□□ -1.35
AC006001.3-201ENST00000449307 PP632Q6XCG6 107 aa6.59□□□□□ -1.36
AC006001.3-201ENST00000449307 USP34Q70CQ2 3546 aa6.58□□□□□ -1.36
AC006001.3-201ENST00000449307 P0C880 135 aa6.57□□□□□ -1.36
AC006001.3-201ENST00000449307 ATMQ13315 3056 aa6.57□□□□□ -1.36
AC006001.3-201ENST00000449307 BOD1L1Q8NFC6 3051 aa6.51□□□□□ -1.37
AC006001.3-201ENST00000449307 ASH1LQ9NR48 2969 aaKnown RBP6.5□□□□□ -1.37
AC006001.3-201ENST00000449307 EYSQ5T1H1 3165 aa6.49□□□□□ -1.37
AC006001.3-201ENST00000449307 FLNCQ14315 2725 aa6.47□□□□□ -1.37
AC006001.3-201ENST00000449307 SPTBN5Q9NRC6 3674 aaKnown RBP6.47□□□□□ -1.37
AC006001.3-201ENST00000449307 TENM1Q9UKZ4 2725 aa6.4□□□□□ -1.39
AC006001.3-201ENST00000449307 TENM2Q9NT68 2774 aa6.4□□□□□ -1.39
AC006001.3-201ENST00000449307 TNRC18O15417 2968 aaPredicted RBP6.39□□□□□ -1.39
AC006001.3-201ENST00000449307 NBEAQ8NFP9 2946 aa6.39□□□□□ -1.39
AC006001.3-201ENST00000449307 H0YAA0 97 aa6.38□□□□□ -1.39
AC006001.3-201ENST00000449307 ADGRG4Q8IZF6 3080 aa6.38□□□□□ -1.39
AC006001.3-201ENST00000449307 CELSR2Q9HCU4 2923 aa6.38□□□□□ -1.39
AC006001.3-201ENST00000449307 NBPF19A0A087WUL8 3843 aa6.34□□□□□ -1.39
AC006001.3-201ENST00000449307 ZZEF1O43149 2961 aa6.33□□□□□ -1.4
AC006001.3-201ENST00000449307 DCHS2Q6V1P9 2916 aa6.3□□□□□ -1.4
AC006001.3-201ENST00000449307 DMXL1Q9Y485 3027 aa6.26□□□□□ -1.41
AC006001.3-201ENST00000449307 CELSR1Q9NYQ6 3014 aa6.21□□□□□ -1.42
AC006001.3-201ENST00000449307 NF1P21359 2839 aa6.19□□□□□ -1.42
AC006001.3-201ENST00000449307 ASPMQ8IZT6 3477 aa6.19□□□□□ -1.42
AC006001.3-201ENST00000449307 KRTAP12-2P59991 146 aa6.17□□□□□ -1.42
AC006001.3-201ENST00000449307 NIPBLQ6KC79 2804 aaeCLIP6.16□□□□□ -1.42
AC006001.3-201ENST00000449307 TENM3Q9P273 2699 aa6.16□□□□□ -1.42
AC006001.3-201ENST00000449307 CRCT1Q9UGL9 99 aa6.14□□□□□ -1.43
AC006001.3-201ENST00000449307 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
AC006001.3-201ENST00000449307 WDFY3Q8IZQ1 3526 aa6.11□□□□□ -1.43
AC006001.3-201ENST00000449307 PKD1L1Q8TDX9 2849 aa6.09□□□□□ -1.43
AC006001.3-201ENST00000449307 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
AC006001.3-201ENST00000449307 LOC400499M0QZD8 3231 aa6.05□□□□□ -1.44
AC006001.3-201ENST00000449307 ZANQ9Y493 2812 aa6.04□□□□□ -1.44
AC006001.3-201ENST00000449307 ZFHX4Q86UP3 3567 aa6.03□□□□□ -1.44
AC006001.3-201ENST00000449307 MYO15AQ9UKN7 3530 aa6.03□□□□□ -1.44
AC006001.3-201ENST00000449307 FBN2P35556 2912 aa6.03□□□□□ -1.44
AC006001.3-201ENST00000449307 VWFP04275 2813 aa6.02□□□□□ -1.45
AC006001.3-201ENST00000449307 HRNRQ86YZ3 2850 aaPredicted RBP6.02□□□□□ -1.45
AC006001.3-201ENST00000449307 TGP01266 2768 aa6□□□□□ -1.45
AC006001.3-201ENST00000449307 RELNP78509 3460 aa5.98□□□□□ -1.45
AC006001.3-201ENST00000449307 KRTAP12-1P59990 96 aa5.96□□□□□ -1.46
AC006001.3-201ENST00000449307 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
AC006001.3-201ENST00000449307 ZFHX3Q15911 3703 aa5.93□□□□□ -1.46
AC006001.3-201ENST00000449307 DCHS1Q96JQ0 3298 aa5.92□□□□□ -1.46
AC006001.3-201ENST00000449307 PDZD2O15018 2839 aa5.91□□□□□ -1.46
AC006001.3-201ENST00000449307 MXRA5Q9NR99 2828 aa5.85□□□□□ -1.47
AC006001.3-201ENST00000449307 MT1HL1P0DM35 61 aa5.84□□□□□ -1.47
AC006001.3-201ENST00000449307 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
AC006001.3-201ENST00000449307 KRTAP10-12P60413 245 aa5.81□□□□□ -1.48
AC006001.3-201ENST00000449307 LAMA5O15230 3695 aa5.8□□□□□ -1.48
AC006001.3-201ENST00000449307 ANK3Q12955 4377 aaKnown RBP5.77□□□□□ -1.49
AC006001.3-201ENST00000449307 CSMD1Q96PZ7 3565 aa5.74□□□□□ -1.49
AC006001.3-201ENST00000449307 LORP23490 312 aaPredicted RBP5.73□□□□□ -1.49
AC006001.3-201ENST00000449307 DMDP11532 3685 aa5.65□□□□□ -1.5
AC006001.3-201ENST00000449307 ALMS1Q8TCU4 4167 aa5.62□□□□□ -1.51
AC006001.3-201ENST00000449307 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
AC006001.3-201ENST00000449307 KRTAP10-6P60371 365 aaPredicted RBP5.62□□□□□ -1.51
AC006001.3-201ENST00000449307 FBN3Q75N90 2809 aa5.61□□□□□ -1.51
AC006001.3-201ENST00000449307 FBN1P35555 2871 aaKnown RBP5.6□□□□□ -1.51
AC006001.3-201ENST00000449307 SPENQ96T58 3664 aaKnown RBP5.59□□□□□ -1.51
AC006001.3-201ENST00000449307 CSMD2Q7Z408 3487 aa5.59□□□□□ -1.52
AC006001.3-201ENST00000449307 HUWE1Q7Z6Z7 4374 aaKnown RBP5.58□□□□□ -1.52
AC006001.3-201ENST00000449307 SMG1Q96Q15 3661 aaKnown RBP5.57□□□□□ -1.52
AC006001.3-201ENST00000449307 SRRM2Q9UQ35 2752 aaKnown RBP5.56□□□□□ -1.52
AC006001.3-201ENST00000449307 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
AC006001.3-201ENST00000449307 OTOGQ6ZRI0 2925 aa5.53□□□□□ -1.52
AC006001.3-201ENST00000449307 TRRAPQ9Y4A5 3859 aa5.53□□□□□ -1.52
AC006001.3-201ENST00000449307 INE1O15225 51 aa5.52□□□□□ -1.53
AC006001.3-201ENST00000449307 MUC3AQ02505 3323 aa5.51□□□□□ -1.53
AC006001.3-201ENST00000449307 MEGF8Q7Z7M0 2845 aa5.5□□□□□ -1.53
AC006001.3-201ENST00000449307 COL7A1Q02388 2944 aa5.5□□□□□ -1.53
AC006001.3-201ENST00000449307 LCE3AQ5TA76 89 aa5.49□□□□□ -1.53
AC006001.3-201ENST00000449307 KRTAP10-4P60372 401 aaPredicted RBP5.47□□□□□ -1.53
AC006001.3-201ENST00000449307 KRTAP3-3Q9BYR6 98 aa5.43□□□□□ -1.54
AC006001.3-201ENST00000449307 SVEP1Q4LDE5 3571 aa5.43□□□□□ -1.54
AC006001.3-201ENST00000449307 KRTAP10-5P60370 271 aa5.43□□□□□ -1.54
AC006001.3-201ENST00000449307 KRTAP3-2Q9BYR7 98 aa5.38□□□□□ -1.55
AC006001.3-201ENST00000449307 CUBNO60494 3623 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms