RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 KRTAP10-11P60412 298 aa5.79□□□□□ -1.48
SMC6-207ENST00000448223 MMP24-AS1A0A0U1RRL7 71 aa5.78□□□□□ -1.48
SMC6-207ENST00000448223 TRRAPQ9Y4A5 3859 aa5.78□□□□□ -1.48
SMC6-207ENST00000448223 IGLV5-37A0A075B6J1 123 aa5.78□□□□□ -1.48
SMC6-207ENST00000448223 CAMK2N1Q7Z7J9 78 aa5.77□□□□□ -1.49
SMC6-207ENST00000448223 C9orf92A6NGG3 77 aa5.77□□□□□ -1.49
SMC6-207ENST00000448223 NDUFAF8A1L188 74 aa5.76□□□□□ -1.49
SMC6-207ENST00000448223 IGLV7-43P04211 117 aa5.76□□□□□ -1.49
SMC6-207ENST00000448223 ANAPC11Q9NYG5 84 aa5.75□□□□□ -1.49
SMC6-207ENST00000448223 TENM2Q9NT68 2774 aa5.75□□□□□ -1.49
SMC6-207ENST00000448223 NBDYA0A0U1RRE5 68 aa5.75□□□□□ -1.49
SMC6-207ENST00000448223 KRTAP25-1Q3LHN0 102 aa5.74□□□□□ -1.49
SMC6-207ENST00000448223 KRTAP24-1Q3LI83 254 aa5.74□□□□□ -1.49
SMC6-207ENST00000448223 RPL37P61927 97 aaKnown RBP5.74□□□□□ -1.49
SMC6-207ENST00000448223 LINC00304Q8N9R0 145 aa5.73□□□□□ -1.49
SMC6-207ENST00000448223 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
SMC6-207ENST00000448223 ADM2Q7Z4H4 148 aa5.71□□□□□ -1.5
SMC6-207ENST00000448223 SEC61BP60468 96 aaKnown RBP5.68□□□□□ -1.5
SMC6-207ENST00000448223 Q5W150 140 aa5.67□□□□□ -1.5
SMC6-207ENST00000448223 ZCCHC13Q8WW36 166 aaKnown RBP5.67□□□□□ -1.5
SMC6-207ENST00000448223 COX6B2Q6YFQ2 88 aa5.66□□□□□ -1.5
SMC6-207ENST00000448223 AKAP9Q99996 3911 aa5.66□□□□□ -1.5
SMC6-207ENST00000448223 SRRM2Q9UQ35 2752 aaKnown RBP5.66□□□□□ -1.5
SMC6-207ENST00000448223 LINC00472Q9H8W2 130 aa5.65□□□□□ -1.5
SMC6-207ENST00000448223 PSORS1C2Q9UIG4 136 aa5.65□□□□□ -1.5
SMC6-207ENST00000448223 A8MU10 97 aa5.65□□□□□ -1.51
SMC6-207ENST00000448223 H1FX-AS1Q4G0G2 97 aa5.65□□□□□ -1.51
SMC6-207ENST00000448223 TNP2Q05952 138 aa5.64□□□□□ -1.51
SMC6-207ENST00000448223 KRTAP26-1Q6PEX3 210 aa5.63□□□□□ -1.51
SMC6-207ENST00000448223 DMBT1Q9UGM3 2413 aaPredicted RBP5.63□□□□□ -1.51
SMC6-207ENST00000448223 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.61□□□□□ -1.51
SMC6-207ENST00000448223 K7EIL1 84 aa5.6□□□□□ -1.51
SMC6-207ENST00000448223 A0A087X002 238 aa5.59□□□□□ -1.51
SMC6-207ENST00000448223 Q6ZR54 194 aa5.58□□□□□ -1.52
SMC6-207ENST00000448223 CSMD3Q7Z407 3707 aa5.57□□□□□ -1.52
SMC6-207ENST00000448223 SPRR1AP35321 89 aa5.57□□□□□ -1.52
SMC6-207ENST00000448223 KRTAP1-5Q9BYS1 174 aa5.56□□□□□ -1.52
SMC6-207ENST00000448223 KRTAP29-1A8MX34 341 aaPredicted RBP5.55□□□□□ -1.52
SMC6-207ENST00000448223 ANK3Q12955 4377 aaKnown RBP5.54□□□□□ -1.52
SMC6-207ENST00000448223 COL7A1Q02388 2944 aa5.54□□□□□ -1.52
SMC6-207ENST00000448223 S4R3F8 94 aa5.54□□□□□ -1.52
SMC6-207ENST00000448223 A0A087WTM6 91 aa5.54□□□□□ -1.52
SMC6-207ENST00000448223 TGP01266 2768 aa5.53□□□□□ -1.52
SMC6-207ENST00000448223 R4GN34 69 aa5.53□□□□□ -1.52
SMC6-207ENST00000448223 KRTAP7-1Q8IUC3 87 aa5.52□□□□□ -1.53
SMC6-207ENST00000448223 SPRR1BP22528 89 aa5.52□□□□□ -1.53
SMC6-207ENST00000448223 C20orf166-AS1Q96NR2 134 aa5.51□□□□□ -1.53
SMC6-207ENST00000448223 PLAC4Q8WY50 150 aa5.51□□□□□ -1.53
SMC6-207ENST00000448223 LCE6AA0A183 80 aa5.51□□□□□ -1.53
SMC6-207ENST00000448223 KRTAP4-16G5E9R7 235 aaPredicted RBP5.51□□□□□ -1.53
SMC6-207ENST00000448223 A8MUU9 505 aa5.5□□□□□ -1.53
SMC6-207ENST00000448223 PANO1I0J062 215 aa5.49□□□□□ -1.53
SMC6-207ENST00000448223 KRTAP11-1Q8IUC1 163 aa5.49□□□□□ -1.53
SMC6-207ENST00000448223 Q6ZSA8 131 aa5.46□□□□□ -1.54
SMC6-207ENST00000448223 M0QZ58 72 aa5.42□□□□□ -1.54
SMC6-207ENST00000448223 SMR3BP02814 79 aaPredicted RBP5.41□□□□□ -1.54
SMC6-207ENST00000448223 FBN3Q75N90 2809 aa5.36□□□□□ -1.55
SMC6-207ENST00000448223 J3QL48 77 aa5.36□□□□□ -1.55
SMC6-207ENST00000448223 WWC2-AS2Q96NR7 200 aa5.35□□□□□ -1.55
SMC6-207ENST00000448223 NOTCH2NLQ7Z3S9 236 aa5.35□□□□□ -1.55
SMC6-207ENST00000448223 PLAC8Q9NZF1 115 aa5.3□□□□□ -1.56
SMC6-207ENST00000448223 C10orf95Q9H7T3 257 aa5.28□□□□□ -1.56
SMC6-207ENST00000448223 MEGF8Q7Z7M0 2845 aa5.21□□□□□ -1.58
SMC6-207ENST00000448223 M0R2T5 61 aa5.21□□□□□ -1.58
SMC6-207ENST00000448223 P0C880 135 aa5.2□□□□□ -1.58
SMC6-207ENST00000448223 KRTAP10-2P60368 255 aa5.2□□□□□ -1.58
SMC6-207ENST00000448223 Q6ZRN7 208 aaPredicted RBP5.19□□□□□ -1.58
SMC6-207ENST00000448223 KRTAP13-1Q8IUC0 172 aa5.19□□□□□ -1.58
SMC6-207ENST00000448223 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
SMC6-207ENST00000448223 DNAH10Q8IVF4 4471 aa5.13□□□□□ -1.59
SMC6-207ENST00000448223 ANK2Q01484 3957 aa5.12□□□□□ -1.59
SMC6-207ENST00000448223 TNP1P09430 55 aa5.11□□□□□ -1.59
SMC6-207ENST00000448223 KRTAP10-1P60331 282 aa5.11□□□□□ -1.59
SMC6-207ENST00000448223 H0YAA0 97 aa5.1□□□□□ -1.59
SMC6-207ENST00000448223 HUWE1Q7Z6Z7 4374 aaKnown RBP5.1□□□□□ -1.59
SMC6-207ENST00000448223 KRTAP13-2Q52LG2 175 aa5.05□□□□□ -1.6
SMC6-207ENST00000448223 LYSTQ99698 3801 aa5.03□□□□□ -1.6
SMC6-207ENST00000448223 KRTAP10-8P60410 259 aa5.02□□□□□ -1.61
SMC6-207ENST00000448223 CMYA5Q8N3K9 4069 aa4.99□□□□□ -1.61
SMC6-207ENST00000448223 DNAH1Q9P2D7 4330 aa4.98□□□□□ -1.61
SMC6-207ENST00000448223 DNAH9Q9NYC9 4486 aa4.97□□□□□ -1.61
SMC6-207ENST00000448223 RPS29P62273 56 aaKnown RBP4.97□□□□□ -1.61
SMC6-207ENST00000448223 KRTAP13-3Q3SY46 172 aa4.95□□□□□ -1.62
SMC6-207ENST00000448223 PLECQ15149 4684 aaKnown RBP4.93□□□□□ -1.62
SMC6-207ENST00000448223 DNAH3Q8TD57 4116 aa4.92□□□□□ -1.62
SMC6-207ENST00000448223 KRTAP1-4P0C5Y4 121 aa4.88□□□□□ -1.63
SMC6-207ENST00000448223 DNAH7Q8WXX0 4024 aa4.87□□□□□ -1.63
SMC6-207ENST00000448223 Q5VSD8 79 aa4.83□□□□□ -1.64
SMC6-207ENST00000448223 FRAS1Q86XX4 4008 aa4.83□□□□□ -1.64
SMC6-207ENST00000448223 DNAH11Q96DT5 4516 aa4.82□□□□□ -1.64
SMC6-207ENST00000448223 STARD9Q9P2P6 4700 aa4.82□□□□□ -1.64
SMC6-207ENST00000448223 DNAH8Q96JB1 4490 aa4.81□□□□□ -1.64
SMC6-207ENST00000448223 KMT2AQ03164 3969 aa4.81□□□□□ -1.64
SMC6-207ENST00000448223 TPRXLQ17RH7 258 aa4.8□□□□□ -1.64
SMC6-207ENST00000448223 PRKDCP78527 4128 aaKnown RBP4.78□□□□□ -1.64
SMC6-207ENST00000448223 VPS13DQ5THJ4 4388 aa4.75□□□□□ -1.65
SMC6-207ENST00000448223 DNHD1Q96M86 4753 aa4.74□□□□□ -1.65
SMC6-207ENST00000448223 DNAH17Q9UFH2 4485 aa4.73□□□□□ -1.65
SMC6-207ENST00000448223 HECTD4Q9Y4D8 3996 aa4.73□□□□□ -1.65
SMC6-207ENST00000448223 DYNC2H1Q8NCM8 4307 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 369.8 ms