RNA–Protein interactions for RNA: ENST00000442034.5

RAB3GAP1-203, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-203ENST00000442034 K7ERS5 55 aa5.58□□□□□ -1.52
RAB3GAP1-203ENST00000442034 UQCR11O14957 56 aa5.58□□□□□ -1.52
RAB3GAP1-203ENST00000442034 Q96NJ1 140 aa5.56□□□□□ -1.52
RAB3GAP1-203ENST00000442034 KRTAP13-1Q8IUC0 172 aa5.55□□□□□ -1.52
RAB3GAP1-203ENST00000442034 MIR22HGQ0VDD5 57 aa5.54□□□□□ -1.52
RAB3GAP1-203ENST00000442034 VPS13CQ709C8 3753 aa5.53□□□□□ -1.52
RAB3GAP1-203ENST00000442034 Q6ZRN7 208 aaPredicted RBP5.52□□□□□ -1.53
RAB3GAP1-203ENST00000442034 SPINK7P58062 85 aa5.51□□□□□ -1.53
RAB3GAP1-203ENST00000442034 Q5W150 140 aa5.5□□□□□ -1.53
RAB3GAP1-203ENST00000442034 LCA10Q71F78 164 aa5.5□□□□□ -1.53
RAB3GAP1-203ENST00000442034 ZFHX3Q15911 3703 aa5.5□□□□□ -1.53
RAB3GAP1-203ENST00000442034 OTOGQ6ZRI0 2925 aa5.49□□□□□ -1.53
RAB3GAP1-203ENST00000442034 A0A087X002 238 aa5.49□□□□□ -1.53
RAB3GAP1-203ENST00000442034 NOTCH2NLQ7Z3S9 236 aa5.49□□□□□ -1.53
RAB3GAP1-203ENST00000442034 PKD1L1Q8TDX9 2849 aa5.47□□□□□ -1.53
RAB3GAP1-203ENST00000442034 RBM12B-AS1Q9P1G2 102 aa5.47□□□□□ -1.53
RAB3GAP1-203ENST00000442034 FLG2Q5D862 2391 aaPredicted RBP5.47□□□□□ -1.53
RAB3GAP1-203ENST00000442034 LINC00304Q8N9R0 145 aa5.47□□□□□ -1.53
RAB3GAP1-203ENST00000442034 DMAC1Q96GE9 116 aa5.46□□□□□ -1.53
RAB3GAP1-203ENST00000442034 ANK3Q12955 4377 aaKnown RBP5.46□□□□□ -1.54
RAB3GAP1-203ENST00000442034 TENM2Q9NT68 2774 aa5.46□□□□□ -1.54
RAB3GAP1-203ENST00000442034 NBPF19A0A087WUL8 3843 aa5.46□□□□□ -1.54
RAB3GAP1-203ENST00000442034 A8MU10 97 aa5.43□□□□□ -1.54
RAB3GAP1-203ENST00000442034 ASB16-AS1Q495Z4 193 aa5.43□□□□□ -1.54
RAB3GAP1-203ENST00000442034 Q8N1X5 172 aa5.42□□□□□ -1.54
RAB3GAP1-203ENST00000442034 FBN1P35555 2871 aaKnown RBP5.39□□□□□ -1.55
RAB3GAP1-203ENST00000442034 A6NN06 94 aa5.38□□□□□ -1.55
RAB3GAP1-203ENST00000442034 C9orf92A6NGG3 77 aa5.38□□□□□ -1.55
RAB3GAP1-203ENST00000442034 KRTAP10-2P60368 255 aa5.37□□□□□ -1.55
RAB3GAP1-203ENST00000442034 KRTAP10-1P60331 282 aa5.35□□□□□ -1.55
RAB3GAP1-203ENST00000442034 TRRAPQ9Y4A5 3859 aa5.34□□□□□ -1.55
RAB3GAP1-203ENST00000442034 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
RAB3GAP1-203ENST00000442034 ZNF469Q96JG9 3925 aaPredicted RBP5.33□□□□□ -1.56
RAB3GAP1-203ENST00000442034 SPATA8Q6RVD6 105 aa5.32□□□□□ -1.56
RAB3GAP1-203ENST00000442034 AKAP9Q99996 3911 aa5.31□□□□□ -1.56
RAB3GAP1-203ENST00000442034 KRTAP13-2Q52LG2 175 aa5.31□□□□□ -1.56
RAB3GAP1-203ENST00000442034 TGP01266 2768 aa5.31□□□□□ -1.56
RAB3GAP1-203ENST00000442034 Q5VSD8 79 aa5.3□□□□□ -1.56
RAB3GAP1-203ENST00000442034 COX6B2Q6YFQ2 88 aa5.3□□□□□ -1.56
RAB3GAP1-203ENST00000442034 A0A1B0GU33 70 aa5.3□□□□□ -1.56
RAB3GAP1-203ENST00000442034 LINC01554Q52M75 96 aa5.3□□□□□ -1.56
RAB3GAP1-203ENST00000442034 SRRM2Q9UQ35 2752 aaKnown RBP5.24□□□□□ -1.57
RAB3GAP1-203ENST00000442034 CSAG1Q6PB30 78 aa5.23□□□□□ -1.57
RAB3GAP1-203ENST00000442034 RPS29P62273 56 aaKnown RBP5.21□□□□□ -1.57
RAB3GAP1-203ENST00000442034 KRTAP13-3Q3SY46 172 aa5.21□□□□□ -1.57
RAB3GAP1-203ENST00000442034 Q6ZSA8 131 aa5.19□□□□□ -1.58
RAB3GAP1-203ENST00000442034 ADM2Q7Z4H4 148 aa5.17□□□□□ -1.58
RAB3GAP1-203ENST00000442034 KRTAP1-4P0C5Y4 121 aa5.16□□□□□ -1.58
RAB3GAP1-203ENST00000442034 H1FX-AS1Q4G0G2 97 aa5.16□□□□□ -1.58
RAB3GAP1-203ENST00000442034 KRTAP16-1A8MUX0 517 aa5.16□□□□□ -1.58
RAB3GAP1-203ENST00000442034 FBN3Q75N90 2809 aa5.15□□□□□ -1.58
RAB3GAP1-203ENST00000442034 A0A0D9SG42 100 aa5.14□□□□□ -1.59
RAB3GAP1-203ENST00000442034 SPINT4Q6UDR6 99 aa5.12□□□□□ -1.59
RAB3GAP1-203ENST00000442034 CRIPTQ9P021 101 aa5.12□□□□□ -1.59
RAB3GAP1-203ENST00000442034 M0R2T5 61 aa5.11□□□□□ -1.59
RAB3GAP1-203ENST00000442034 A8MUU9 505 aa5.09□□□□□ -1.59
RAB3GAP1-203ENST00000442034 C20orf166-AS1Q96NR2 134 aa5.08□□□□□ -1.6
RAB3GAP1-203ENST00000442034 RPL37P61927 97 aaKnown RBP5.07□□□□□ -1.6
RAB3GAP1-203ENST00000442034 S4R3F8 94 aa5.06□□□□□ -1.6
RAB3GAP1-203ENST00000442034 HUWE1Q7Z6Z7 4374 aaKnown RBP5.04□□□□□ -1.6
RAB3GAP1-203ENST00000442034 ROMO1P60602 79 aa5.04□□□□□ -1.6
RAB3GAP1-203ENST00000442034 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
RAB3GAP1-203ENST00000442034 MEGF8Q7Z7M0 2845 aa5.03□□□□□ -1.6
RAB3GAP1-203ENST00000442034 SEC61BP60468 96 aaKnown RBP5.01□□□□□ -1.61
RAB3GAP1-203ENST00000442034 H3BS24 57 aa5□□□□□ -1.61
RAB3GAP1-203ENST00000442034 COL7A1Q02388 2944 aa4.99□□□□□ -1.61
RAB3GAP1-203ENST00000442034 H0YAA0 97 aa4.99□□□□□ -1.61
RAB3GAP1-203ENST00000442034 CSMD3Q7Z407 3707 aa4.91□□□□□ -1.62
RAB3GAP1-203ENST00000442034 DNAH10Q8IVF4 4471 aa4.86□□□□□ -1.63
RAB3GAP1-203ENST00000442034 DNAH9Q9NYC9 4486 aa4.86□□□□□ -1.63
RAB3GAP1-203ENST00000442034 R4GN34 69 aa4.85□□□□□ -1.63
RAB3GAP1-203ENST00000442034 KRTAP3-1Q9BYR8 98 aa4.84□□□□□ -1.64
RAB3GAP1-203ENST00000442034 M0QZ58 72 aa4.83□□□□□ -1.64
RAB3GAP1-203ENST00000442034 XP32Q5T750 250 aa4.82□□□□□ -1.64
RAB3GAP1-203ENST00000442034 PLECQ15149 4684 aaKnown RBP4.8□□□□□ -1.64
RAB3GAP1-203ENST00000442034 DNAH1Q9P2D7 4330 aa4.79□□□□□ -1.64
RAB3GAP1-203ENST00000442034 A0A1B0GVY2 172 aa4.78□□□□□ -1.64
RAB3GAP1-203ENST00000442034 CAMK2N1Q7Z7J9 78 aa4.76□□□□□ -1.65
RAB3GAP1-203ENST00000442034 ANK2Q01484 3957 aa4.75□□□□□ -1.65
RAB3GAP1-203ENST00000442034 DNHD1Q96M86 4753 aa4.75□□□□□ -1.65
RAB3GAP1-203ENST00000442034 KRTAP10-8P60410 259 aa4.75□□□□□ -1.65
RAB3GAP1-203ENST00000442034 VPS13DQ5THJ4 4388 aa4.74□□□□□ -1.65
RAB3GAP1-203ENST00000442034 DNAH3Q8TD57 4116 aa4.74□□□□□ -1.65
RAB3GAP1-203ENST00000442034 P0C880 135 aa4.73□□□□□ -1.65
RAB3GAP1-203ENST00000442034 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
RAB3GAP1-203ENST00000442034 DNAH17Q9UFH2 4485 aa4.71□□□□□ -1.66
RAB3GAP1-203ENST00000442034 C10orf95Q9H7T3 257 aa4.71□□□□□ -1.66
RAB3GAP1-203ENST00000442034 CMYA5Q8N3K9 4069 aa4.67□□□□□ -1.66
RAB3GAP1-203ENST00000442034 DNAH8Q96JB1 4490 aa4.67□□□□□ -1.66
RAB3GAP1-203ENST00000442034 KRTAP10-6P60371 365 aaPredicted RBP4.67□□□□□ -1.66
RAB3GAP1-203ENST00000442034 NDUFAF8A1L188 74 aa4.66□□□□□ -1.66
RAB3GAP1-203ENST00000442034 DNAH11Q96DT5 4516 aa4.66□□□□□ -1.66
RAB3GAP1-203ENST00000442034 TPRXLQ17RH7 258 aa4.65□□□□□ -1.66
RAB3GAP1-203ENST00000442034 STARD9Q9P2P6 4700 aa4.65□□□□□ -1.67
RAB3GAP1-203ENST00000442034 KRTAP10-4P60372 401 aaPredicted RBP4.64□□□□□ -1.67
RAB3GAP1-203ENST00000442034 KRTAP13-4Q3LI77 160 aa4.62□□□□□ -1.67
RAB3GAP1-203ENST00000442034 DNAH2Q9P225 4427 aa4.61□□□□□ -1.67
RAB3GAP1-203ENST00000442034 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
RAB3GAP1-203ENST00000442034 KRTAP3-3Q9BYR6 98 aa4.59□□□□□ -1.67
RAB3GAP1-203ENST00000442034 DYNC2H1Q8NCM8 4307 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms