RNA–Protein interactions for RNA: ENST00000442034.5

RAB3GAP1-203, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-203ENST00000442034 MT1LQ93083 61 aa3.14□□□□□ -1.91
RAB3GAP1-203ENST00000442034 MT1EP04732 61 aa3.11□□□□□ -1.91
RAB3GAP1-203ENST00000442034 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
RAB3GAP1-203ENST00000442034 KRTAP19-6Q3LI70 58 aa3.08□□□□□ -1.92
RAB3GAP1-203ENST00000442034 MT1GP13640 62 aa3.06□□□□□ -1.92
RAB3GAP1-203ENST00000442034 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.05□□□□□ -1.92
RAB3GAP1-203ENST00000442034 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
RAB3GAP1-203ENST00000442034 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
RAB3GAP1-203ENST00000442034 KRTAP2-1Q9BYU5 128 aa3.05□□□□□ -1.92
RAB3GAP1-203ENST00000442034 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.92
RAB3GAP1-203ENST00000442034 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.92
RAB3GAP1-203ENST00000442034 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
RAB3GAP1-203ENST00000442034 KRTAP20-1Q3LI63 56 aa3.01□□□□□ -1.93
RAB3GAP1-203ENST00000442034 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
RAB3GAP1-203ENST00000442034 USH2AO75445 5202 aa2.98□□□□□ -1.93
RAB3GAP1-203ENST00000442034 KRTAP6-3Q3LI67 103 aa2.96□□□□□ -1.94
RAB3GAP1-203ENST00000442034 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.94
RAB3GAP1-203ENST00000442034 LCE3BQ5TA77 95 aa2.95□□□□□ -1.94
RAB3GAP1-203ENST00000442034 MT1MQ8N339 61 aa2.94□□□□□ -1.94
RAB3GAP1-203ENST00000442034 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
RAB3GAP1-203ENST00000442034 LOC100996750A0A140TA64 210 aa2.93□□□□□ -1.94
RAB3GAP1-203ENST00000442034 KRTAP4-3Q9BYR4 195 aa2.92□□□□□ -1.94
RAB3GAP1-203ENST00000442034 KMT2DO14686 5537 aa2.91□□□□□ -1.94
RAB3GAP1-203ENST00000442034 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
RAB3GAP1-203ENST00000442034 DSTQ03001 7570 aaKnown RBP2.83□□□□□ -1.96
RAB3GAP1-203ENST00000442034 MT4P47944 62 aa2.83□□□□□ -1.96
RAB3GAP1-203ENST00000442034 SSPOA2VEC9 5147 aa2.82□□□□□ -1.96
RAB3GAP1-203ENST00000442034 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
RAB3GAP1-203ENST00000442034 KRTAP2-2Q9BYT5 123 aa2.79□□□□□ -1.96
RAB3GAP1-203ENST00000442034 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
RAB3GAP1-203ENST00000442034 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
RAB3GAP1-203ENST00000442034 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
RAB3GAP1-203ENST00000442034 LCE5AQ5TCM9 118 aa2.72□□□□□ -1.97
RAB3GAP1-203ENST00000442034 MT1AP04731 61 aa2.71□□□□□ -1.98
RAB3GAP1-203ENST00000442034 KRTAP4-9Q9BYQ8 210 aa2.69□□□□□ -1.98
RAB3GAP1-203ENST00000442034 MDN1Q9NU22 5596 aa2.65□□□□□ -1.98
RAB3GAP1-203ENST00000442034 NEBP20929 6669 aa2.65□□□□□ -1.98
RAB3GAP1-203ENST00000442034 PRM1P04553 51 aa2.65□□□□□ -1.99
RAB3GAP1-203ENST00000442034 KRTAP6-1Q3LI64 71 aa2.64□□□□□ -1.99
RAB3GAP1-203ENST00000442034 MUC12Q9UKN1 5478 aa2.61□□□□□ -1.99
RAB3GAP1-203ENST00000442034 MT3P25713 68 aa2.59□□□□□ -1.99
RAB3GAP1-203ENST00000442034 LCE4AQ5TA78 99 aa2.56□□□□□ -2
RAB3GAP1-203ENST00000442034 KRTAP5-9P26371 169 aa2.51□□□□□ -2.01
RAB3GAP1-203ENST00000442034 KRTAP9-4Q9BYQ2 154 aa2.5□□□□□ -2.01
RAB3GAP1-203ENST00000442034 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
RAB3GAP1-203ENST00000442034 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
RAB3GAP1-203ENST00000442034 LCE1DQ5T752 114 aa2.45□□□□□ -2.02
RAB3GAP1-203ENST00000442034 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
RAB3GAP1-203ENST00000442034 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
RAB3GAP1-203ENST00000442034 KRTAP9-9Q9BYP9 154 aa2.27□□□□□ -2.05
RAB3GAP1-203ENST00000442034 KRTAP4-6Q9BYQ5 205 aa2.24□□□□□ -2.05
RAB3GAP1-203ENST00000442034 KRTAP20-2Q3LI61 65 aa2.16□□□□□ -2.06
RAB3GAP1-203ENST00000442034 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
RAB3GAP1-203ENST00000442034 LCE1EQ5T753 118 aa2.1□□□□□ -2.07
RAB3GAP1-203ENST00000442034 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
RAB3GAP1-203ENST00000442034 KRTAP5-3Q6L8H2 238 aa2.07□□□□□ -2.08
RAB3GAP1-203ENST00000442034 KRTAP4-11Q9BYQ6 195 aa2.06□□□□□ -2.08
RAB3GAP1-203ENST00000442034 KRTAP5-4Q6L8H1 288 aa2.05□□□□□ -2.08
RAB3GAP1-203ENST00000442034 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
RAB3GAP1-203ENST00000442034 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
RAB3GAP1-203ENST00000442034 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
RAB3GAP1-203ENST00000442034 KRTAP5-2Q701N4 177 aa1.88□□□□□ -2.11
RAB3GAP1-203ENST00000442034 KRTAP4-12Q9BQ66 201 aa1.84□□□□□ -2.12
RAB3GAP1-203ENST00000442034 KRTAP4-2Q9BYR5 136 aa1.84□□□□□ -2.12
RAB3GAP1-203ENST00000442034 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
RAB3GAP1-203ENST00000442034 KRTAP5-10Q6L8G5 202 aa1.79□□□□□ -2.12
RAB3GAP1-203ENST00000442034 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
RAB3GAP1-203ENST00000442034 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
RAB3GAP1-203ENST00000442034 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
RAB3GAP1-203ENST00000442034 KRTAP5-1Q6L8H4 278 aa1.64□□□□□ -2.15
RAB3GAP1-203ENST00000442034 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
RAB3GAP1-203ENST00000442034 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
RAB3GAP1-203ENST00000442034 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
RAB3GAP1-203ENST00000442034 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.55□□□□□ -2.16
RAB3GAP1-203ENST00000442034 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
RAB3GAP1-203ENST00000442034 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
RAB3GAP1-203ENST00000442034 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 6.9 ms