RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 SPINK7P58062 85 aa12.59□□□□□ -0.39
FMR1-208ENST00000440235 FBN1P35555 2871 aaKnown RBP12.59□□□□□ -0.39
FMR1-208ENST00000440235 TNP2Q05952 138 aa12.59□□□□□ -0.39
FMR1-208ENST00000440235 LINC00472Q9H8W2 130 aa12.55□□□□□ -0.4
FMR1-208ENST00000440235 LINC00304Q8N9R0 145 aa12.54□□□□□ -0.4
FMR1-208ENST00000440235 ANK3Q12955 4377 aaKnown RBP12.51□□□□□ -0.41
FMR1-208ENST00000440235 PANO1I0J062 215 aa12.49□□□□□ -0.41
FMR1-208ENST00000440235 A8MU10 97 aa12.47□□□□□ -0.41
FMR1-208ENST00000440235 Q75L30 129 aa12.47□□□□□ -0.41
FMR1-208ENST00000440235 CRIPTQ9P021 101 aa12.46□□□□□ -0.41
FMR1-208ENST00000440235 WWC2-AS2Q96NR7 200 aa12.43□□□□□ -0.42
FMR1-208ENST00000440235 TRRAPQ9Y4A5 3859 aa12.43□□□□□ -0.42
FMR1-208ENST00000440235 KRTAP4-16G5E9R7 235 aaPredicted RBP12.4□□□□□ -0.42
FMR1-208ENST00000440235 LINC01554Q52M75 96 aa12.4□□□□□ -0.42
FMR1-208ENST00000440235 LINC01558Q9Y6Z2 57 aa12.4□□□□□ -0.42
FMR1-208ENST00000440235 SRRM2Q9UQ35 2752 aaKnown RBP12.36□□□□□ -0.43
FMR1-208ENST00000440235 A0A087X002 238 aa12.36□□□□□ -0.43
FMR1-208ENST00000440235 NOTCH2NLQ7Z3S9 236 aa12.36□□□□□ -0.43
FMR1-208ENST00000440235 KRTAP11-1Q8IUC1 163 aa12.36□□□□□ -0.43
FMR1-208ENST00000440235 AKAP9Q99996 3911 aa12.34□□□□□ -0.43
FMR1-208ENST00000440235 Q5W150 140 aa12.32□□□□□ -0.44
FMR1-208ENST00000440235 SPRR1BP22528 89 aa12.29□□□□□ -0.44
FMR1-208ENST00000440235 KRTAP7-1Q8IUC3 87 aa12.28□□□□□ -0.44
FMR1-208ENST00000440235 KRTAP29-1A8MX34 341 aaPredicted RBP12.28□□□□□ -0.44
FMR1-208ENST00000440235 ZCCHC13Q8WW36 166 aaKnown RBP12.27□□□□□ -0.44
FMR1-208ENST00000440235 CSAG1Q6PB30 78 aa12.27□□□□□ -0.45
FMR1-208ENST00000440235 A0A1B0GU33 70 aa12.23□□□□□ -0.45
FMR1-208ENST00000440235 TGP01266 2768 aa12.2□□□□□ -0.46
FMR1-208ENST00000440235 TENM2Q9NT68 2774 aa12.19□□□□□ -0.46
FMR1-208ENST00000440235 PLAC8Q9NZF1 115 aa12.17□□□□□ -0.46
FMR1-208ENST00000440235 H3BS24 57 aa12.11□□□□□ -0.47
FMR1-208ENST00000440235 KRTAP10-2P60368 255 aa12.1□□□□□ -0.47
FMR1-208ENST00000440235 ADM2Q7Z4H4 148 aa12.07□□□□□ -0.48
FMR1-208ENST00000440235 KRTAP10-1P60331 282 aa12□□□□□ -0.49
FMR1-208ENST00000440235 Q6ZR54 194 aa12□□□□□ -0.49
FMR1-208ENST00000440235 COX6B2Q6YFQ2 88 aa11.99□□□□□ -0.49
FMR1-208ENST00000440235 DMAC1Q96GE9 116 aa11.96□□□□□ -0.49
FMR1-208ENST00000440235 SPATA8Q6RVD6 105 aa11.95□□□□□ -0.5
FMR1-208ENST00000440235 LCE6AA0A183 80 aa11.91□□□□□ -0.5
FMR1-208ENST00000440235 LINC00483Q53H64 154 aa11.87□□□□□ -0.51
FMR1-208ENST00000440235 J3QL48 77 aa11.86□□□□□ -0.51
FMR1-208ENST00000440235 A6NN06 94 aa11.82□□□□□ -0.52
FMR1-208ENST00000440235 Q6ZSA8 131 aa11.76□□□□□ -0.53
FMR1-208ENST00000440235 Q6ZRN7 208 aaPredicted RBP11.74□□□□□ -0.53
FMR1-208ENST00000440235 FBN3Q75N90 2809 aa11.71□□□□□ -0.54
FMR1-208ENST00000440235 CAMK2N1Q7Z7J9 78 aa11.67□□□□□ -0.54
FMR1-208ENST00000440235 KRTAP13-1Q8IUC0 172 aa11.66□□□□□ -0.54
FMR1-208ENST00000440235 H1FX-AS1Q4G0G2 97 aa11.65□□□□□ -0.54
FMR1-208ENST00000440235 KRTAP13-2Q52LG2 175 aa11.65□□□□□ -0.54
FMR1-208ENST00000440235 RPL37P61927 97 aaKnown RBP11.64□□□□□ -0.55
FMR1-208ENST00000440235 S4R3F8 94 aa11.63□□□□□ -0.55
FMR1-208ENST00000440235 COL7A1Q02388 2944 aa11.58□□□□□ -0.56
FMR1-208ENST00000440235 LUZP6Q538Z0 58 aa11.56□□□□□ -0.56
FMR1-208ENST00000440235 ROMO1P60602 79 aa11.53□□□□□ -0.56
FMR1-208ENST00000440235 R4GN34 69 aa11.53□□□□□ -0.56
FMR1-208ENST00000440235 CSMD3Q7Z407 3707 aa11.45□□□□□ -0.58
FMR1-208ENST00000440235 HUWE1Q7Z6Z7 4374 aaKnown RBP11.43□□□□□ -0.58
FMR1-208ENST00000440235 M0QZ58 72 aa11.4□□□□□ -0.58
FMR1-208ENST00000440235 Q5VSD8 79 aa11.4□□□□□ -0.58
FMR1-208ENST00000440235 MEGF8Q7Z7M0 2845 aa11.39□□□□□ -0.59
FMR1-208ENST00000440235 KRTAP25-1Q3LHN0 102 aa11.36□□□□□ -0.59
FMR1-208ENST00000440235 ASB16-AS1Q495Z4 193 aa11.32□□□□□ -0.6
FMR1-208ENST00000440235 ANK2Q01484 3957 aa11.29□□□□□ -0.6
FMR1-208ENST00000440235 M0R2T5 61 aa11.27□□□□□ -0.6
FMR1-208ENST00000440235 NDUFAF8A1L188 74 aa11.24□□□□□ -0.61
FMR1-208ENST00000440235 C10orf95Q9H7T3 257 aa11.18□□□□□ -0.62
FMR1-208ENST00000440235 DNAH10Q8IVF4 4471 aa11.15□□□□□ -0.62
FMR1-208ENST00000440235 A8MUU9 505 aa11.15□□□□□ -0.62
FMR1-208ENST00000440235 DNAH9Q9NYC9 4486 aa11.12□□□□□ -0.63
FMR1-208ENST00000440235 KRTAP1-4P0C5Y4 121 aa11.08□□□□□ -0.64
FMR1-208ENST00000440235 H0YAA0 97 aa11.07□□□□□ -0.64
FMR1-208ENST00000440235 PLECQ15149 4684 aaKnown RBP11.03□□□□□ -0.64
FMR1-208ENST00000440235 CMYA5Q8N3K9 4069 aa11□□□□□ -0.65
FMR1-208ENST00000440235 SEC61BP60468 96 aaKnown RBP10.98□□□□□ -0.65
FMR1-208ENST00000440235 A0A0A0MQY5 61 aa10.98□□□□□ -0.65
FMR1-208ENST00000440235 KRTAP16-1A8MUX0 517 aa10.92□□□□□ -0.66
FMR1-208ENST00000440235 LYSTQ99698 3801 aa10.91□□□□□ -0.66
FMR1-208ENST00000440235 DNAH3Q8TD57 4116 aa10.91□□□□□ -0.66
FMR1-208ENST00000440235 C20orf166-AS1Q96NR2 134 aa10.9□□□□□ -0.66
FMR1-208ENST00000440235 RPS29P62273 56 aaKnown RBP10.87□□□□□ -0.67
FMR1-208ENST00000440235 KRTAP13-3Q3SY46 172 aa10.81□□□□□ -0.68
FMR1-208ENST00000440235 STARD9Q9P2P6 4700 aa10.8□□□□□ -0.68
FMR1-208ENST00000440235 DNAH1Q9P2D7 4330 aa10.79□□□□□ -0.68
FMR1-208ENST00000440235 P0C880 135 aa10.78□□□□□ -0.68
FMR1-208ENST00000440235 PRKDCP78527 4128 aaKnown RBP10.76□□□□□ -0.69
FMR1-208ENST00000440235 KRTAP21-3Q3LHN1 58 aa10.71□□□□□ -0.69
FMR1-208ENST00000440235 VPS13DQ5THJ4 4388 aa10.68□□□□□ -0.7
FMR1-208ENST00000440235 XP32Q5T750 250 aa10.67□□□□□ -0.7
FMR1-208ENST00000440235 DNAH7Q8WXX0 4024 aa10.66□□□□□ -0.7
FMR1-208ENST00000440235 PLAC4Q8WY50 150 aa10.65□□□□□ -0.7
FMR1-208ENST00000440235 DNHD1Q96M86 4753 aa10.64□□□□□ -0.71
FMR1-208ENST00000440235 KMT2AQ03164 3969 aa10.61□□□□□ -0.71
FMR1-208ENST00000440235 DNAH11Q96DT5 4516 aa10.6□□□□□ -0.71
FMR1-208ENST00000440235 KRTAP10-8P60410 259 aa10.58□□□□□ -0.72
FMR1-208ENST00000440235 A0A1B0GVY2 172 aa10.52□□□□□ -0.73
FMR1-208ENST00000440235 DNAH17Q9UFH2 4485 aa10.51□□□□□ -0.73
FMR1-208ENST00000440235 DNAH8Q96JB1 4490 aa10.45□□□□□ -0.74
FMR1-208ENST00000440235 KRTAP3-1Q9BYR8 98 aa10.41□□□□□ -0.74
FMR1-208ENST00000440235 DYNC2H1Q8NCM8 4307 aaKnown RBP10.4□□□□□ -0.74
FMR1-208ENST00000440235 DNAH2Q9P225 4427 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms