RNA–Protein interactions for RNA: ENST00000439415.1

CBX1P4-201, Transcript of chromobox 1 pseudogene 4, humanhuman

BASIC

Gene CBX1P4, Length 457 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P4-201ENST00000439415 AMELXQ99217 191 aa2.1□□□□□ -2.07
CBX1P4-201ENST00000439415 TMEM14CQ9P0S9 112 aa2.1□□□□□ -2.07
CBX1P4-201ENST00000439415 IGKV3-7A0A075B6H7 116 aa2.09□□□□□ -2.07
CBX1P4-201ENST00000439415 LOC110117498A0A087WWA1 95 aa2.09□□□□□ -2.07
CBX1P4-201ENST00000439415 NUPR2A6NF83 97 aa2.09□□□□□ -2.07
CBX1P4-201ENST00000439415 SPINK7P58062 85 aa2.09□□□□□ -2.07
CBX1P4-201ENST00000439415 LINC00322Q6ZN03 302 aaPredicted RBP2.09□□□□□ -2.07
CBX1P4-201ENST00000439415 DEFB106AQ8N104 65 aa2.09□□□□□ -2.07
CBX1P4-201ENST00000439415 MYCBP2O75592 4640 aa2.08□□□□□ -2.08
CBX1P4-201ENST00000439415 ARL14EPLP0DKL9 152 aa2.08□□□□□ -2.08
CBX1P4-201ENST00000439415 PCOTHQ58A44 107 aa2.08□□□□□ -2.08
CBX1P4-201ENST00000439415 COX7B2Q8TF08 81 aa2.08□□□□□ -2.08
CBX1P4-201ENST00000439415 DMAC1Q96GE9 116 aa2.08□□□□□ -2.08
CBX1P4-201ENST00000439415 LINC00208Q96KT6 92 aa2.08□□□□□ -2.08
CBX1P4-201ENST00000439415 STAB2Q8WWQ8 2551 aa2.07□□□□□ -2.08
CBX1P4-201ENST00000439415 NDUFA3O95167 84 aa2.07□□□□□ -2.08
CBX1P4-201ENST00000439415 PDE6GP18545 87 aa2.07□□□□□ -2.08
CBX1P4-201ENST00000439415 ZNF137PP52743 207 aa2.07□□□□□ -2.08
CBX1P4-201ENST00000439415 CCL18P55774 89 aa2.07□□□□□ -2.08
CBX1P4-201ENST00000439415 RPL38P63173 70 aaKnown RBP2.07□□□□□ -2.08
CBX1P4-201ENST00000439415 KRTAP4-3Q9BYR4 195 aa2.07□□□□□ -2.08
CBX1P4-201ENST00000439415 UBL5Q9BZL1 73 aa2.07□□□□□ -2.08
CBX1P4-201ENST00000439415 WFDC10AQ9H1F0 79 aa2.07□□□□□ -2.08
CBX1P4-201ENST00000439415 MRPL36Q9P0J6 103 aaKnown RBP2.07□□□□□ -2.08
CBX1P4-201ENST00000439415 DNAH17Q9UFH2 4485 aa2.07□□□□□ -2.08
CBX1P4-201ENST00000439415 PLCE1Q9P212 2302 aa2.06□□□□□ -2.08
CBX1P4-201ENST00000439415 NDUFB1O75438 58 aa2.06□□□□□ -2.08
CBX1P4-201ENST00000439415 IGLV3-1P01715 115 aa2.06□□□□□ -2.08
CBX1P4-201ENST00000439415 UNQ6190/PRO20217Q6UXQ8 127 aa2.06□□□□□ -2.08
CBX1P4-201ENST00000439415 SPRR4Q96PI1 79 aa2.06□□□□□ -2.08
CBX1P4-201ENST00000439415 TMEM167BQ9NRX6 74 aa2.06□□□□□ -2.08
CBX1P4-201ENST00000439415 IGKV3OR2-268A0A0C4DH90 116 aa2.05□□□□□ -2.08
CBX1P4-201ENST00000439415 TRBV6-1A0A0K0K1D8 114 aa2.05□□□□□ -2.08
CBX1P4-201ENST00000439415 CCL3L1P16619 93 aa2.05□□□□□ -2.08
CBX1P4-201ENST00000439415 PKD1P98161 4303 aa2.05□□□□□ -2.08
CBX1P4-201ENST00000439415 APOBP04114 4563 aaKnown RBP2.05□□□□□ -2.08
CBX1P4-201ENST00000439415 LRP1BQ9NZR2 4599 aa2.04□□□□□ -2.08
CBX1P4-201ENST00000439415 H0Y9P7 68 aa2.04□□□□□ -2.08
CBX1P4-201ENST00000439415 CCL22O00626 93 aa2.04□□□□□ -2.08
CBX1P4-201ENST00000439415 SPATA8Q6RVD6 105 aa2.04□□□□□ -2.08
CBX1P4-201ENST00000439415 HMCN2Q8NDA2 5059 aa2.04□□□□□ -2.08
CBX1P4-201ENST00000439415 DNAH6Q9C0G6 4158 aa2.04□□□□□ -2.08
CBX1P4-201ENST00000439415 LINC00959A0A1B0GUT2 108 aa2.03□□□□□ -2.08
CBX1P4-201ENST00000439415 A0A087WTM6 91 aa2.02□□□□□ -2.09
CBX1P4-201ENST00000439415 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
CBX1P4-201ENST00000439415 C10orf113Q5VZT2 155 aa2.02□□□□□ -2.09
CBX1P4-201ENST00000439415 TTTY10Q9BZA0 68 aa2.02□□□□□ -2.09
CBX1P4-201ENST00000439415 R4GMQ9 66 aa2.02□□□□□ -2.09
CBX1P4-201ENST00000439415 FAT1Q14517 4588 aa2.01□□□□□ -2.09
CBX1P4-201ENST00000439415 CPSF4LA6NMK7 179 aaKnown RBP2.01□□□□□ -2.09
CBX1P4-201ENST00000439415 K7EIL1 84 aa2.01□□□□□ -2.09
CBX1P4-201ENST00000439415 NDUFA4O00483 81 aa2.01□□□□□ -2.09
CBX1P4-201ENST00000439415 UQCR11O14957 56 aa2.01□□□□□ -2.09
CBX1P4-201ENST00000439415 IAPPP10997 89 aa2.01□□□□□ -2.09
CBX1P4-201ENST00000439415 KRTAP12-1P59990 96 aa2.01□□□□□ -2.09
CBX1P4-201ENST00000439415 ARHGAP5-AS1Q96IT6 56 aa2.01□□□□□ -2.09
CBX1P4-201ENST00000439415 NCR3O14931 201 aa2□□□□□ -2.09
CBX1P4-201ENST00000439415 MGPP08493 103 aa2□□□□□ -2.09
CBX1P4-201ENST00000439415 RPL37AP61513 92 aaKnown RBP2□□□□□ -2.09
CBX1P4-201ENST00000439415 DEFB114Q30KQ6 69 aa2□□□□□ -2.09
CBX1P4-201ENST00000439415 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
CBX1P4-201ENST00000439415 GAFA1Q96PS6 74 aa2□□□□□ -2.09
CBX1P4-201ENST00000439415 LINC00472Q9H8W2 130 aa2□□□□□ -2.09
CBX1P4-201ENST00000439415 RNF213Q63HN8 5207 aa2□□□□□ -2.09
CBX1P4-201ENST00000439415 DNAH5Q8TE73 4624 aa2□□□□□ -2.09
CBX1P4-201ENST00000439415 LINC01590Q5TEZ4 76 aa1.99□□□□□ -2.09
CBX1P4-201ENST00000439415 TNCP24821 2201 aa1.98□□□□□ -2.09
CBX1P4-201ENST00000439415 IGKV2-40A0A087WW87 121 aaPredicted RBP1.98□□□□□ -2.09
CBX1P4-201ENST00000439415 NBDYA0A0U1RRE5 68 aa1.98□□□□□ -2.09
CBX1P4-201ENST00000439415 H0YGX0 51 aa1.98□□□□□ -2.09
CBX1P4-201ENST00000439415 IGKV2D-40P01614 121 aaPredicted RBP1.98□□□□□ -2.09
CBX1P4-201ENST00000439415 HAMPP81172 84 aa1.98□□□□□ -2.09
CBX1P4-201ENST00000439415 DEFB112Q30KQ8 113 aa1.98□□□□□ -2.09
CBX1P4-201ENST00000439415 PP632Q6XCG6 107 aa1.98□□□□□ -2.09
CBX1P4-201ENST00000439415 KCNQ1DNQ9H478 68 aa1.98□□□□□ -2.09
CBX1P4-201ENST00000439415 WNK2Q9Y3S1 2297 aa1.98□□□□□ -2.09
CBX1P4-201ENST00000439415 IGKV2-29A2NJV5 120 aaPredicted RBP1.97□□□□□ -2.09
CBX1P4-201ENST00000439415 H0YGG7 62 aa1.97□□□□□ -2.09
CBX1P4-201ENST00000439415 FXYD4P59646 89 aa1.97□□□□□ -2.09
CBX1P4-201ENST00000439415 Q96NJ1 140 aa1.96□□□□□ -2.1
CBX1P4-201ENST00000439415 CNFNQ9BYD5 112 aa1.96□□□□□ -2.1
CBX1P4-201ENST00000439415 ETDCA0A1B0GVM5 59 aa1.95□□□□□ -2.1
CBX1P4-201ENST00000439415 LYNX1G3V0Z9 82 aa1.95□□□□□ -2.1
CBX1P4-201ENST00000439415 LYNX1P0DP58 116 aa1.95□□□□□ -2.1
CBX1P4-201ENST00000439415 SMIM2Q9BVW6 85 aa1.95□□□□□ -2.1
CBX1P4-201ENST00000439415 VPS13BQ7Z7G8 4022 aa1.94□□□□□ -2.1
CBX1P4-201ENST00000439415 MUC2Q02817 5179 aa1.94□□□□□ -2.1
CBX1P4-201ENST00000439415 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.94□□□□□ -2.1
CBX1P4-201ENST00000439415 DMBT1Q9UGM3 2413 aaPredicted RBP1.93□□□□□ -2.1
CBX1P4-201ENST00000439415 H3BSH0 61 aa1.93□□□□□ -2.1
CBX1P4-201ENST00000439415 COX7BP24311 80 aa1.93□□□□□ -2.1
CBX1P4-201ENST00000439415 C5orf56Q8N8D9 126 aa1.93□□□□□ -2.1
CBX1P4-201ENST00000439415 LINC00308Q8TCZ7 52 aa1.93□□□□□ -2.1
CBX1P4-201ENST00000439415 FAT4Q6V0I7 4981 aa1.93□□□□□ -2.1
CBX1P4-201ENST00000439415 TRGV1A0A0A0MS02 117 aa1.92□□□□□ -2.1
CBX1P4-201ENST00000439415 LRP2P98164 4655 aa1.92□□□□□ -2.1
CBX1P4-201ENST00000439415 FAT3Q8TDW7 4589 aa1.92□□□□□ -2.1
CBX1P4-201ENST00000439415 PKHD1L1Q86WI1 4243 aa1.91□□□□□ -2.1
CBX1P4-201ENST00000439415 A0A1B0GU69 56 aa1.91□□□□□ -2.1
CBX1P4-201ENST00000439415 NDUFA1O15239 70 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms