RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 PCP4P48539 62 aa5.24□□□□□ -1.57
AC011228.1-201ENST00000439027 Q6JHZ5 121 aa5.24□□□□□ -1.57
AC011228.1-201ENST00000439027 IGFL1Q6UW32 110 aa5.24□□□□□ -1.57
AC011228.1-201ENST00000439027 SSBP3-AS1Q7Z2R9 100 aa5.24□□□□□ -1.57
AC011228.1-201ENST00000439027 Q8NBF4 154 aa5.24□□□□□ -1.57
AC011228.1-201ENST00000439027 TRBV7-4A0A0J9YYF1 115 aa5.23□□□□□ -1.57
AC011228.1-201ENST00000439027 LOC110117498A0A087WWA1 95 aa5.22□□□□□ -1.57
AC011228.1-201ENST00000439027 VPS25Q9BRG1 176 aa5.22□□□□□ -1.57
AC011228.1-201ENST00000439027 PDE6GP18545 87 aa5.21□□□□□ -1.58
AC011228.1-201ENST00000439027 HRCT1Q6UXD1 115 aa5.21□□□□□ -1.58
AC011228.1-201ENST00000439027 Q6ZQT0 140 aa5.21□□□□□ -1.58
AC011228.1-201ENST00000439027 FP248Q71RG6 208 aaPredicted RBP5.21□□□□□ -1.58
AC011228.1-201ENST00000439027 A0A1W2PNM2 257 aa5.2□□□□□ -1.58
AC011228.1-201ENST00000439027 CCKP06307 115 aa5.2□□□□□ -1.58
AC011228.1-201ENST00000439027 SPINK1P00995 79 aa5.18□□□□□ -1.58
AC011228.1-201ENST00000439027 KRTAP13-3Q3SY46 172 aa5.17□□□□□ -1.58
AC011228.1-201ENST00000439027 CD164Q04900 197 aa5.16□□□□□ -1.58
AC011228.1-201ENST00000439027 Q6Q795 121 aa5.16□□□□□ -1.58
AC011228.1-201ENST00000439027 TRBV7-7A0A0K0K1E9 115 aa5.15□□□□□ -1.59
AC011228.1-201ENST00000439027 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
AC011228.1-201ENST00000439027 A0A087WSZ3 146 aa5.14□□□□□ -1.59
AC011228.1-201ENST00000439027 SEC61BP60468 96 aaKnown RBP5.14□□□□□ -1.59
AC011228.1-201ENST00000439027 ASB16-AS1Q495Z4 193 aa5.14□□□□□ -1.59
AC011228.1-201ENST00000439027 A0A1B0GW54 56 aa5.13□□□□□ -1.59
AC011228.1-201ENST00000439027 J3QR89 54 aa5.13□□□□□ -1.59
AC011228.1-201ENST00000439027 K7ERU9 68 aa5.11□□□□□ -1.59
AC011228.1-201ENST00000439027 ACYP1P07311 99 aa5.11□□□□□ -1.59
AC011228.1-201ENST00000439027 RPS29P62273 56 aaKnown RBP5.11□□□□□ -1.59
AC011228.1-201ENST00000439027 LIMD2Q9BT23 127 aa5.11□□□□□ -1.59
AC011228.1-201ENST00000439027 KRTAP4-1Q9BYQ7 146 aa5.11□□□□□ -1.59
AC011228.1-201ENST00000439027 LINC00846Q9NV44 126 aa5.11□□□□□ -1.59
AC011228.1-201ENST00000439027 SS18L2Q9UHA2 77 aa5.11□□□□□ -1.59
AC011228.1-201ENST00000439027 FAM240AA0A1B0GVK7 77 aa5.1□□□□□ -1.59
AC011228.1-201ENST00000439027 NREPQ16612 68 aa5.09□□□□□ -1.59
AC011228.1-201ENST00000439027 Q5XG85 94 aa5.09□□□□□ -1.59
AC011228.1-201ENST00000439027 UBL5Q9BZL1 73 aa5.08□□□□□ -1.6
AC011228.1-201ENST00000439027 DEFB116Q30KQ4 102 aa5.07□□□□□ -1.6
AC011228.1-201ENST00000439027 Q6ZVQ6 151 aa5.07□□□□□ -1.6
AC011228.1-201ENST00000439027 C1orf195Q5TG92 126 aa5.06□□□□□ -1.6
AC011228.1-201ENST00000439027 LINC00472Q9H8W2 130 aa5.06□□□□□ -1.6
AC011228.1-201ENST00000439027 Q96NJ1 140 aa5.05□□□□□ -1.6
AC011228.1-201ENST00000439027 C9orf92A6NGG3 77 aa5.03□□□□□ -1.6
AC011228.1-201ENST00000439027 BPY2O14599 106 aa5.03□□□□□ -1.6
AC011228.1-201ENST00000439027 IGKV4-1P06312 121 aa5.03□□□□□ -1.6
AC011228.1-201ENST00000439027 PCOTHQ58A44 107 aa5.02□□□□□ -1.61
AC011228.1-201ENST00000439027 SIGMAR1Q99720 223 aa5.02□□□□□ -1.61
AC011228.1-201ENST00000439027 IGKV3D-7A0A0C4DH55 119 aa5.01□□□□□ -1.61
AC011228.1-201ENST00000439027 J3KT08 172 aa5.01□□□□□ -1.61
AC011228.1-201ENST00000439027 LINC00643Q86TS7 51 aa5.01□□□□□ -1.61
AC011228.1-201ENST00000439027 FSIP2Q5CZC0 6907 aa4.99□□□□□ -1.61
AC011228.1-201ENST00000439027 DSCR10P59022 87 aa4.99□□□□□ -1.61
AC011228.1-201ENST00000439027 A8MWP4 228 aa4.98□□□□□ -1.61
AC011228.1-201ENST00000439027 NDUFB1O75438 58 aa4.98□□□□□ -1.61
AC011228.1-201ENST00000439027 CXCL6P80162 114 aa4.98□□□□□ -1.61
AC011228.1-201ENST00000439027 ATP5EP2Q5VTU8 51 aa4.98□□□□□ -1.61
AC011228.1-201ENST00000439027 Q8N9L7 120 aa4.98□□□□□ -1.61
AC011228.1-201ENST00000439027 CRCT1Q9UGL9 99 aa4.98□□□□□ -1.61
AC011228.1-201ENST00000439027 A0A0A0MQY5 61 aa4.97□□□□□ -1.61
AC011228.1-201ENST00000439027 IGHV6-1A0A0B4J1U7 121 aa4.97□□□□□ -1.61
AC011228.1-201ENST00000439027 K7EQZ3 153 aa4.97□□□□□ -1.61
AC011228.1-201ENST00000439027 A0A1B0GVX0 72 aa4.96□□□□□ -1.62
AC011228.1-201ENST00000439027 MT-ATP8P03928 68 aa4.95□□□□□ -1.62
AC011228.1-201ENST00000439027 HIST1H4AP62805 103 aaKnown RBP4.95□□□□□ -1.62
AC011228.1-201ENST00000439027 PRR15Q8IV56 129 aa4.95□□□□□ -1.62
AC011228.1-201ENST00000439027 MT1HP80294 61 aa4.94□□□□□ -1.62
AC011228.1-201ENST00000439027 KRTAP19-2Q3LHN2 52 aa4.94□□□□□ -1.62
AC011228.1-201ENST00000439027 NOTCH2NLQ7Z3S9 236 aa4.93□□□□□ -1.62
AC011228.1-201ENST00000439027 LINC00313P59037 77 aa4.92□□□□□ -1.62
AC011228.1-201ENST00000439027 C8orf17Q9NRJ1 99 aa4.92□□□□□ -1.62
AC011228.1-201ENST00000439027 C8orf87E5RJ46 101 aa4.91□□□□□ -1.62
AC011228.1-201ENST00000439027 M0R2T5 61 aa4.91□□□□□ -1.62
AC011228.1-201ENST00000439027 COX6B2Q6YFQ2 88 aa4.91□□□□□ -1.62
AC011228.1-201ENST00000439027 FLGP20930 4061 aaPredicted RBP4.91□□□□□ -1.62
AC011228.1-201ENST00000439027 A0A087WVE0 104 aa4.9□□□□□ -1.63
AC011228.1-201ENST00000439027 MMP24-AS1A0A0U1RRL7 71 aa4.9□□□□□ -1.63
AC011228.1-201ENST00000439027 RPL37P61927 97 aaKnown RBP4.9□□□□□ -1.63
AC011228.1-201ENST00000439027 WFDC13Q8IUB5 93 aa4.89□□□□□ -1.63
AC011228.1-201ENST00000439027 IMUPQ9GZP8 106 aa4.89□□□□□ -1.63
AC011228.1-201ENST00000439027 hDV103S1A0JD37 113 aa4.88□□□□□ -1.63
AC011228.1-201ENST00000439027 HCG22E2RYF7 251 aa4.88□□□□□ -1.63
AC011228.1-201ENST00000439027 CASC2Q6XLA1 102 aa4.88□□□□□ -1.63
AC011228.1-201ENST00000439027 KRTAP10-6P60371 365 aaPredicted RBP4.87□□□□□ -1.63
AC011228.1-201ENST00000439027 KRTAP16-1A8MUX0 517 aa4.86□□□□□ -1.63
AC011228.1-201ENST00000439027 TMEM254Q8TBM7 123 aa4.86□□□□□ -1.63
AC011228.1-201ENST00000439027 MRPL34Q9BQ48 92 aaKnown RBP4.85□□□□□ -1.63
AC011228.1-201ENST00000439027 NDUFS5O43920 106 aa4.83□□□□□ -1.64
AC011228.1-201ENST00000439027 FAM236AA0A1B0GUQ0 79 aa4.82□□□□□ -1.64
AC011228.1-201ENST00000439027 FAM236BA0A1B0GV22 79 aa4.82□□□□□ -1.64
AC011228.1-201ENST00000439027 ATP11AUNQ6ZP68 121 aa4.82□□□□□ -1.64
AC011228.1-201ENST00000439027 A8MUU9 505 aa4.81□□□□□ -1.64
AC011228.1-201ENST00000439027 SCGB1A1P11684 91 aa4.81□□□□□ -1.64
AC011228.1-201ENST00000439027 Q8N9P0 234 aaPredicted RBP4.81□□□□□ -1.64
AC011228.1-201ENST00000439027 C20orf166-AS1Q96NR2 134 aa4.81□□□□□ -1.64
AC011228.1-201ENST00000439027 Q75L30 129 aa4.8□□□□□ -1.64
AC011228.1-201ENST00000439027 TP53AIP1Q9HCN2 124 aa4.76□□□□□ -1.65
AC011228.1-201ENST00000439027 SEC61GP60059 68 aa4.75□□□□□ -1.65
AC011228.1-201ENST00000439027 ZCCHC13Q8WW36 166 aaKnown RBP4.75□□□□□ -1.65
AC011228.1-201ENST00000439027 OCR1Q9BZK8 76 aa4.75□□□□□ -1.65
AC011228.1-201ENST00000439027 ATOX1O00244 68 aa4.74□□□□□ -1.65
AC011228.1-201ENST00000439027 UQCRQO14949 82 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms