RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 KRTAP10-1P60331 282 aa7.03□□□□□ -1.28
TRAPPC9-202ENST00000438773 Q96NJ1 140 aa7.03□□□□□ -1.28
TRAPPC9-202ENST00000438773 KRTAP11-1Q8IUC1 163 aa7.02□□□□□ -1.29
TRAPPC9-202ENST00000438773 TGP01266 2768 aa6.99□□□□□ -1.29
TRAPPC9-202ENST00000438773 TENM2Q9NT68 2774 aa6.99□□□□□ -1.29
TRAPPC9-202ENST00000438773 ZCCHC13Q8WW36 166 aaKnown RBP6.97□□□□□ -1.29
TRAPPC9-202ENST00000438773 CYP4F30PQ9H0H9 118 aa6.97□□□□□ -1.29
TRAPPC9-202ENST00000438773 CD164Q04900 197 aa6.96□□□□□ -1.3
TRAPPC9-202ENST00000438773 PRAC1Q96KF2 57 aa6.96□□□□□ -1.3
TRAPPC9-202ENST00000438773 DNAH10Q8IVF4 4471 aa6.95□□□□□ -1.3
TRAPPC9-202ENST00000438773 LYSTQ99698 3801 aa6.95□□□□□ -1.3
TRAPPC9-202ENST00000438773 KTN1-AS1Q86SY8 53 aa6.95□□□□□ -1.3
TRAPPC9-202ENST00000438773 Q1T7F1 81 aa6.95□□□□□ -1.3
TRAPPC9-202ENST00000438773 Q8N9P0 234 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC9-202ENST00000438773 Q5VSD8 79 aa6.94□□□□□ -1.3
TRAPPC9-202ENST00000438773 LINC00472Q9H8W2 130 aa6.94□□□□□ -1.3
TRAPPC9-202ENST00000438773 COL7A1Q02388 2944 aa6.93□□□□□ -1.3
TRAPPC9-202ENST00000438773 A8MU10 97 aa6.93□□□□□ -1.3
TRAPPC9-202ENST00000438773 C9orf92A6NGG3 77 aa6.93□□□□□ -1.3
TRAPPC9-202ENST00000438773 Q8N1X5 172 aa6.93□□□□□ -1.3
TRAPPC9-202ENST00000438773 Q5VV11 94 aa6.91□□□□□ -1.3
TRAPPC9-202ENST00000438773 RBM12B-AS1Q9P1G2 102 aa6.9□□□□□ -1.3
TRAPPC9-202ENST00000438773 MIR22HGQ0VDD5 57 aa6.9□□□□□ -1.31
TRAPPC9-202ENST00000438773 UQCR11O14957 56 aa6.9□□□□□ -1.31
TRAPPC9-202ENST00000438773 LINC00483Q53H64 154 aa6.9□□□□□ -1.31
TRAPPC9-202ENST00000438773 MMP24-AS1A0A0U1RRL7 71 aa6.89□□□□□ -1.31
TRAPPC9-202ENST00000438773 SPINK7P58062 85 aa6.88□□□□□ -1.31
TRAPPC9-202ENST00000438773 SPANXA2-OT1Q8N9U9 137 aa6.87□□□□□ -1.31
TRAPPC9-202ENST00000438773 DNAH1Q9P2D7 4330 aa6.87□□□□□ -1.31
TRAPPC9-202ENST00000438773 CDC42SE1Q9NRR8 79 aa6.86□□□□□ -1.31
TRAPPC9-202ENST00000438773 A0A087X002 238 aa6.84□□□□□ -1.31
TRAPPC9-202ENST00000438773 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.32
TRAPPC9-202ENST00000438773 KRTAP13-1Q8IUC0 172 aa6.84□□□□□ -1.32
TRAPPC9-202ENST00000438773 KRTAP29-1A8MX34 341 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC9-202ENST00000438773 COX6B2Q6YFQ2 88 aa6.83□□□□□ -1.32
TRAPPC9-202ENST00000438773 HRES1P13985 223 aa6.82□□□□□ -1.32
TRAPPC9-202ENST00000438773 LCA10Q71F78 164 aa6.82□□□□□ -1.32
TRAPPC9-202ENST00000438773 DNAH9Q9NYC9 4486 aa6.82□□□□□ -1.32
TRAPPC9-202ENST00000438773 CRIPTQ9P021 101 aa6.8□□□□□ -1.32
TRAPPC9-202ENST00000438773 CMYA5Q8N3K9 4069 aa6.8□□□□□ -1.32
TRAPPC9-202ENST00000438773 A0A0D9SG42 100 aa6.78□□□□□ -1.32
TRAPPC9-202ENST00000438773 HUWE1Q7Z6Z7 4374 aaKnown RBP6.77□□□□□ -1.33
TRAPPC9-202ENST00000438773 SPINT4Q6UDR6 99 aa6.77□□□□□ -1.33
TRAPPC9-202ENST00000438773 Q75L30 129 aa6.77□□□□□ -1.33
TRAPPC9-202ENST00000438773 NOTCH2NLQ7Z3S9 236 aa6.76□□□□□ -1.33
TRAPPC9-202ENST00000438773 LINC01558Q9Y6Z2 57 aa6.72□□□□□ -1.33
TRAPPC9-202ENST00000438773 DNAH7Q8WXX0 4024 aa6.71□□□□□ -1.33
TRAPPC9-202ENST00000438773 KRTAP13-2Q52LG2 175 aa6.7□□□□□ -1.34
TRAPPC9-202ENST00000438773 Q6ZSA8 131 aa6.69□□□□□ -1.34
TRAPPC9-202ENST00000438773 DNAH3Q8TD57 4116 aa6.68□□□□□ -1.34
TRAPPC9-202ENST00000438773 CSAG1Q6PB30 78 aa6.67□□□□□ -1.34
TRAPPC9-202ENST00000438773 Q5W150 140 aa6.67□□□□□ -1.34
TRAPPC9-202ENST00000438773 FBN3Q75N90 2809 aa6.67□□□□□ -1.34
TRAPPC9-202ENST00000438773 ADM2Q7Z4H4 148 aa6.65□□□□□ -1.34
TRAPPC9-202ENST00000438773 LINC01554Q52M75 96 aa6.64□□□□□ -1.35
TRAPPC9-202ENST00000438773 FRAS1Q86XX4 4008 aa6.64□□□□□ -1.35
TRAPPC9-202ENST00000438773 H3BS24 57 aa6.62□□□□□ -1.35
TRAPPC9-202ENST00000438773 ASB16-AS1Q495Z4 193 aa6.62□□□□□ -1.35
TRAPPC9-202ENST00000438773 PLECQ15149 4684 aaKnown RBP6.58□□□□□ -1.36
TRAPPC9-202ENST00000438773 A0A1B0GU33 70 aa6.57□□□□□ -1.36
TRAPPC9-202ENST00000438773 SEC61BP60468 96 aaKnown RBP6.56□□□□□ -1.36
TRAPPC9-202ENST00000438773 MEGF8Q7Z7M0 2845 aa6.55□□□□□ -1.36
TRAPPC9-202ENST00000438773 M0R2T5 61 aa6.55□□□□□ -1.36
TRAPPC9-202ENST00000438773 KRTAP1-4P0C5Y4 121 aa6.55□□□□□ -1.36
TRAPPC9-202ENST00000438773 DNAH8Q96JB1 4490 aa6.53□□□□□ -1.36
TRAPPC9-202ENST00000438773 A6NN06 94 aa6.53□□□□□ -1.36
TRAPPC9-202ENST00000438773 RPS29P62273 56 aaKnown RBP6.53□□□□□ -1.36
TRAPPC9-202ENST00000438773 SPATA8Q6RVD6 105 aa6.49□□□□□ -1.37
TRAPPC9-202ENST00000438773 DMAC1Q96GE9 116 aa6.46□□□□□ -1.37
TRAPPC9-202ENST00000438773 STARD9Q9P2P6 4700 aa6.45□□□□□ -1.38
TRAPPC9-202ENST00000438773 KMT2AQ03164 3969 aa6.45□□□□□ -1.38
TRAPPC9-202ENST00000438773 DNAH17Q9UFH2 4485 aa6.44□□□□□ -1.38
TRAPPC9-202ENST00000438773 HECTD4Q9Y4D8 3996 aa6.42□□□□□ -1.38
TRAPPC9-202ENST00000438773 KRTAP13-3Q3SY46 172 aa6.41□□□□□ -1.38
TRAPPC9-202ENST00000438773 DNAH2Q9P225 4427 aa6.4□□□□□ -1.39
TRAPPC9-202ENST00000438773 A0A1B0GVY2 172 aa6.38□□□□□ -1.39
TRAPPC9-202ENST00000438773 DYNC2H1Q8NCM8 4307 aaKnown RBP6.37□□□□□ -1.39
TRAPPC9-202ENST00000438773 VPS13DQ5THJ4 4388 aa6.35□□□□□ -1.39
TRAPPC9-202ENST00000438773 DNAH6Q9C0G6 4158 aa6.35□□□□□ -1.39
TRAPPC9-202ENST00000438773 S4R3F8 94 aa6.32□□□□□ -1.4
TRAPPC9-202ENST00000438773 ALMS1Q8TCU4 4167 aa6.31□□□□□ -1.4
TRAPPC9-202ENST00000438773 PRKDCP78527 4128 aaKnown RBP6.31□□□□□ -1.4
TRAPPC9-202ENST00000438773 A8MUU9 505 aa6.3□□□□□ -1.4
TRAPPC9-202ENST00000438773 C20orf166-AS1Q96NR2 134 aa6.3□□□□□ -1.4
TRAPPC9-202ENST00000438773 DNAH11Q96DT5 4516 aa6.29□□□□□ -1.4
TRAPPC9-202ENST00000438773 H1FX-AS1Q4G0G2 97 aa6.28□□□□□ -1.4
TRAPPC9-202ENST00000438773 RPL37P61927 97 aaKnown RBP6.27□□□□□ -1.41
TRAPPC9-202ENST00000438773 DNHD1Q96M86 4753 aa6.27□□□□□ -1.41
TRAPPC9-202ENST00000438773 KRTAP16-1A8MUX0 517 aa6.25□□□□□ -1.41
TRAPPC9-202ENST00000438773 LRP1BQ9NZR2 4599 aa6.24□□□□□ -1.41
TRAPPC9-202ENST00000438773 CAMK2N1Q7Z7J9 78 aa6.23□□□□□ -1.41
TRAPPC9-202ENST00000438773 DNAH5Q8TE73 4624 aa6.21□□□□□ -1.42
TRAPPC9-202ENST00000438773 ROMO1P60602 79 aa6.2□□□□□ -1.42
TRAPPC9-202ENST00000438773 KRTAP10-8P60410 259 aa6.19□□□□□ -1.42
TRAPPC9-202ENST00000438773 XP32Q5T750 250 aa6.18□□□□□ -1.42
TRAPPC9-202ENST00000438773 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
TRAPPC9-202ENST00000438773 VPS13BQ7Z7G8 4022 aa6.12□□□□□ -1.43
TRAPPC9-202ENST00000438773 R4GN34 69 aa6.12□□□□□ -1.43
TRAPPC9-202ENST00000438773 LUZP6Q538Z0 58 aa6.12□□□□□ -1.43
TRAPPC9-202ENST00000438773 NDUFAF8A1L188 74 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms