RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 COL6A5A8TX70 2615 aa0.86□□□□□ -2.27
LSM1P1-201ENST00000438629 MGAQ8IWI9 3026 aa0.86□□□□□ -2.27
LSM1P1-201ENST00000438629 A0A096LNI7 61 aa0.85□□□□□ -2.27
LSM1P1-201ENST00000438629 CCDC168Q8NDH2 2452 aa0.85□□□□□ -2.27
LSM1P1-201ENST00000438629 PRUNE2Q8WUY3 3088 aa0.85□□□□□ -2.27
LSM1P1-201ENST00000438629 CSMD3Q7Z407 3707 aa0.85□□□□□ -2.27
LSM1P1-201ENST00000438629 HTTP42858 3142 aa0.85□□□□□ -2.27
LSM1P1-201ENST00000438629 NCOR1O75376 2440 aa0.85□□□□□ -2.27
LSM1P1-201ENST00000438629 UNC80Q8N2C7 3258 aa0.84□□□□□ -2.27
LSM1P1-201ENST00000438629 LAMA2P24043 3122 aaKnown RBP0.84□□□□□ -2.27
LSM1P1-201ENST00000438629 DNAH8Q96JB1 4490 aa0.84□□□□□ -2.27
LSM1P1-201ENST00000438629 VPS13BQ7Z7G8 4022 aa0.84□□□□□ -2.28
LSM1P1-201ENST00000438629 LAMA3Q16787 3333 aa0.83□□□□□ -2.28
LSM1P1-201ENST00000438629 PRKDCP78527 4128 aaKnown RBP0.83□□□□□ -2.28
LSM1P1-201ENST00000438629 VCANP13611 3396 aa0.83□□□□□ -2.28
LSM1P1-201ENST00000438629 VWFP04275 2813 aa0.83□□□□□ -2.28
LSM1P1-201ENST00000438629 AKAP13Q12802 2813 aa0.83□□□□□ -2.28
LSM1P1-201ENST00000438629 KRTAP2-3P0C7H8 128 aa0.83□□□□□ -2.28
LSM1P1-201ENST00000438629 KRTAP2-4Q9BYR9 128 aa0.83□□□□□ -2.28
LSM1P1-201ENST00000438629 KRTAP2-1Q9BYU5 128 aa0.83□□□□□ -2.28
LSM1P1-201ENST00000438629 NAV2Q8IVL1 2488 aa0.83□□□□□ -2.28
LSM1P1-201ENST00000438629 CDH23Q9H251 3354 aa0.83□□□□□ -2.28
LSM1P1-201ENST00000438629 SRRM2Q9UQ35 2752 aaKnown RBP0.82□□□□□ -2.28
LSM1P1-201ENST00000438629 AKAP9Q99996 3911 aa0.82□□□□□ -2.28
LSM1P1-201ENST00000438629 SPART-AS1P0CW21 52 aa0.82□□□□□ -2.28
LSM1P1-201ENST00000438629 DEFB110Q30KQ9 67 aa0.82□□□□□ -2.28
LSM1P1-201ENST00000438629 DEFB108BQ8NET1 73 aa0.82□□□□□ -2.28
LSM1P1-201ENST00000438629 RANBP2P49792 3224 aaKnown RBP0.82□□□□□ -2.28
LSM1P1-201ENST00000438629 KMT2AQ03164 3969 aa0.82□□□□□ -2.28
LSM1P1-201ENST00000438629 MUC3AQ02505 3323 aa0.82□□□□□ -2.28
LSM1P1-201ENST00000438629 LYSTQ99698 3801 aa0.81□□□□□ -2.28
LSM1P1-201ENST00000438629 UBR5O95071 2799 aaPredicted RBP0.81□□□□□ -2.28
LSM1P1-201ENST00000438629 DYNC2H1Q8NCM8 4307 aaKnown RBP0.81□□□□□ -2.28
LSM1P1-201ENST00000438629 CRYBG3Q68DQ2 2970 aa0.81□□□□□ -2.28
LSM1P1-201ENST00000438629 DEFB124Q8NES8 71 aa0.81□□□□□ -2.28
LSM1P1-201ENST00000438629 ZNF469Q96JG9 3925 aaPredicted RBP0.81□□□□□ -2.28
LSM1P1-201ENST00000438629 BSNQ9UPA5 3926 aa0.81□□□□□ -2.28
LSM1P1-201ENST00000438629 CHD9Q3L8U1 2897 aa0.81□□□□□ -2.28
LSM1P1-201ENST00000438629 DNAH2Q9P225 4427 aa0.81□□□□□ -2.28
LSM1P1-201ENST00000438629 NOTCH1P46531 2555 aa0.8□□□□□ -2.28
LSM1P1-201ENST00000438629 DCHS1Q96JQ0 3298 aa0.8□□□□□ -2.28
LSM1P1-201ENST00000438629 HECTD1Q9ULT8 2610 aa0.8□□□□□ -2.28
LSM1P1-201ENST00000438629 C9orf92A6NGG3 77 aa0.8□□□□□ -2.28
LSM1P1-201ENST00000438629 SMR3AQ99954 134 aa0.8□□□□□ -2.28
LSM1P1-201ENST00000438629 DMBT1Q9UGM3 2413 aaPredicted RBP0.8□□□□□ -2.28
LSM1P1-201ENST00000438629 ANK2Q01484 3957 aa0.8□□□□□ -2.28
LSM1P1-201ENST00000438629 WDFY4Q6ZS81 3184 aa0.8□□□□□ -2.28
LSM1P1-201ENST00000438629 TNXBP22105 4242 aa0.79□□□□□ -2.28
LSM1P1-201ENST00000438629 MAP1BP46821 2468 aaKnown RBP0.79□□□□□ -2.28
LSM1P1-201ENST00000438629 SETD2Q9BYW2 2564 aaPredicted RBP0.79□□□□□ -2.28
LSM1P1-201ENST00000438629 DNAH7Q8WXX0 4024 aa0.79□□□□□ -2.28
LSM1P1-201ENST00000438629 TENM4Q6N022 2769 aa0.79□□□□□ -2.28
LSM1P1-201ENST00000438629 H3BNG1 76 aa0.79□□□□□ -2.28
LSM1P1-201ENST00000438629 ANK3Q12955 4377 aaKnown RBP0.79□□□□□ -2.28
LSM1P1-201ENST00000438629 APC2O95996 2303 aa0.79□□□□□ -2.28
LSM1P1-201ENST00000438629 DNAH3Q8TD57 4116 aa0.79□□□□□ -2.28
LSM1P1-201ENST00000438629 FAT2Q9NYQ8 4349 aa0.79□□□□□ -2.28
LSM1P1-201ENST00000438629 C5orf42Q9H799 3197 aa0.79□□□□□ -2.28
LSM1P1-201ENST00000438629 DNAH10Q8IVF4 4471 aa0.79□□□□□ -2.28
LSM1P1-201ENST00000438629 PKHD1L1Q86WI1 4243 aa0.78□□□□□ -2.28
LSM1P1-201ENST00000438629 SPTBN5Q9NRC6 3674 aaKnown RBP0.78□□□□□ -2.28
LSM1P1-201ENST00000438629 CHD6Q8TD26 2715 aa0.78□□□□□ -2.28
LSM1P1-201ENST00000438629 DNAH12Q6ZR08 3092 aa0.78□□□□□ -2.28
LSM1P1-201ENST00000438629 CFAP54Q96N23 3096 aa0.78□□□□□ -2.28
LSM1P1-201ENST00000438629 CACNA1AO00555 2505 aa0.78□□□□□ -2.28
LSM1P1-201ENST00000438629 XIRP2A4UGR9 3374 aa0.77□□□□□ -2.29
LSM1P1-201ENST00000438629 FAM186AA6NE01 2351 aa0.77□□□□□ -2.29
LSM1P1-201ENST00000438629 CREBBPQ92793 2442 aa0.77□□□□□ -2.29
LSM1P1-201ENST00000438629 FBN2P35556 2912 aa0.77□□□□□ -2.29
LSM1P1-201ENST00000438629 CFAP47Q6ZTR5 3102 aa0.77□□□□□ -2.29
LSM1P1-201ENST00000438629 ZFHX4Q86UP3 3567 aa0.77□□□□□ -2.29
LSM1P1-201ENST00000438629 VPS13AQ96RL7 3174 aa0.77□□□□□ -2.29
LSM1P1-201ENST00000438629 ATRQ13535 2644 aa0.76□□□□□ -2.29
LSM1P1-201ENST00000438629 PIEZO1Q92508 2521 aa0.76□□□□□ -2.29
LSM1P1-201ENST00000438629 CEP250Q9BV73 2442 aa0.76□□□□□ -2.29
LSM1P1-201ENST00000438629 A0A096LPF7 62 aa0.76□□□□□ -2.29
LSM1P1-201ENST00000438629 PRM1P04553 51 aa0.76□□□□□ -2.29
LSM1P1-201ENST00000438629 TRIOO75962 3097 aa0.76□□□□□ -2.29
LSM1P1-201ENST00000438629 DMXL1Q9Y485 3027 aa0.76□□□□□ -2.29
LSM1P1-201ENST00000438629 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
LSM1P1-201ENST00000438629 PDZD2O15018 2839 aa0.75□□□□□ -2.29
LSM1P1-201ENST00000438629 USP34Q70CQ2 3546 aa0.75□□□□□ -2.29
LSM1P1-201ENST00000438629 KRTAP5-10Q6L8G5 202 aa0.75□□□□□ -2.29
LSM1P1-201ENST00000438629 RELNP78509 3460 aa0.75□□□□□ -2.29
LSM1P1-201ENST00000438629 FASNP49327 2511 aaKnown RBP0.75□□□□□ -2.29
LSM1P1-201ENST00000438629 HSPG2P98160 4391 aa0.75□□□□□ -2.29
LSM1P1-201ENST00000438629 SPENQ96T58 3664 aaKnown RBP0.74□□□□□ -2.29
LSM1P1-201ENST00000438629 RIF1Q5UIP0 2472 aaKnown RBP0.74□□□□□ -2.29
LSM1P1-201ENST00000438629 NBASA2RRP1 2371 aa0.74□□□□□ -2.29
LSM1P1-201ENST00000438629 LOC400499M0QZD8 3231 aa0.74□□□□□ -2.29
LSM1P1-201ENST00000438629 USP24Q9UPU5 2620 aa0.74□□□□□ -2.29
LSM1P1-201ENST00000438629 DNAH1Q9P2D7 4330 aa0.73□□□□□ -2.29
LSM1P1-201ENST00000438629 FAT3Q8TDW7 4589 aa0.73□□□□□ -2.29
LSM1P1-201ENST00000438629 EPG5Q9HCE0 2579 aa0.73□□□□□ -2.29
LSM1P1-201ENST00000438629 SPEGQ15772 3267 aa0.73□□□□□ -2.29
LSM1P1-201ENST00000438629 WDR87Q6ZQQ6 2873 aa0.73□□□□□ -2.29
LSM1P1-201ENST00000438629 MYO15AQ9UKN7 3530 aa0.73□□□□□ -2.29
LSM1P1-201ENST00000438629 KRTAP8-1Q8IUC2 63 aa0.73□□□□□ -2.29
LSM1P1-201ENST00000438629 DNAH6Q9C0G6 4158 aa0.73□□□□□ -2.29
LSM1P1-201ENST00000438629 DNHD1Q96M86 4753 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms