RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 LOC101927531A0A1B0GV80 90 aa11.4□□□□□ -0.59
FAM239A-202ENST00000438107 NOTCH2NLQ7Z3S9 236 aa11.4□□□□□ -0.59
FAM239A-202ENST00000438107 PRR15LQ9BU68 103 aa11.4□□□□□ -0.59
FAM239A-202ENST00000438107 DNAH8Q96JB1 4490 aa11.38□□□□□ -0.59
FAM239A-202ENST00000438107 KMT2AQ03164 3969 aa11.38□□□□□ -0.59
FAM239A-202ENST00000438107 FBN3Q75N90 2809 aa11.38□□□□□ -0.59
FAM239A-202ENST00000438107 C1orf134Q5TEV5 83 aa11.37□□□□□ -0.59
FAM239A-202ENST00000438107 CHKB-CPT1BH3BT56 60 aa11.36□□□□□ -0.59
FAM239A-202ENST00000438107 Q75L30 129 aa11.36□□□□□ -0.59
FAM239A-202ENST00000438107 TGP01266 2768 aa11.36□□□□□ -0.59
FAM239A-202ENST00000438107 SSBP3-AS1Q7Z2R9 100 aa11.34□□□□□ -0.59
FAM239A-202ENST00000438107 DNAH2Q9P225 4427 aa11.32□□□□□ -0.6
FAM239A-202ENST00000438107 SPINK6Q6UWN8 80 aa11.32□□□□□ -0.6
FAM239A-202ENST00000438107 C8orf87E5RJ46 101 aa11.31□□□□□ -0.6
FAM239A-202ENST00000438107 KRTAP21-3Q3LHN1 58 aa11.31□□□□□ -0.6
FAM239A-202ENST00000438107 LINC01558Q9Y6Z2 57 aa11.31□□□□□ -0.6
FAM239A-202ENST00000438107 KRTAP13-3Q3SY46 172 aa11.31□□□□□ -0.6
FAM239A-202ENST00000438107 CIRBP-AS1Q8TBR5 109 aa11.31□□□□□ -0.6
FAM239A-202ENST00000438107 HRES1P13985 223 aa11.3□□□□□ -0.6
FAM239A-202ENST00000438107 Q5W150 140 aa11.27□□□□□ -0.61
FAM239A-202ENST00000438107 PMAIP1Q13794 54 aa11.24□□□□□ -0.61
FAM239A-202ENST00000438107 A8MU10 97 aa11.24□□□□□ -0.61
FAM239A-202ENST00000438107 FRAS1Q86XX4 4008 aa11.24□□□□□ -0.61
FAM239A-202ENST00000438107 SPAG11AQ6PDA7 123 aa11.23□□□□□ -0.61
FAM239A-202ENST00000438107 LY6G6CO95867 125 aa11.22□□□□□ -0.61
FAM239A-202ENST00000438107 A6NED7 52 aa11.21□□□□□ -0.61
FAM239A-202ENST00000438107 LCA10Q71F78 164 aa11.18□□□□□ -0.62
FAM239A-202ENST00000438107 LINC00313P59037 77 aa11.17□□□□□ -0.62
FAM239A-202ENST00000438107 ATP11AUNQ6ZP68 121 aa11.16□□□□□ -0.62
FAM239A-202ENST00000438107 CDC42SE1Q9NRR8 79 aa11.16□□□□□ -0.62
FAM239A-202ENST00000438107 FAM229AH3BQW9 127 aa11.14□□□□□ -0.63
FAM239A-202ENST00000438107 ACYP2P14621 99 aa11.14□□□□□ -0.63
FAM239A-202ENST00000438107 KRTAP10-2P60368 255 aa11.13□□□□□ -0.63
FAM239A-202ENST00000438107 ALMS1Q8TCU4 4167 aa11.12□□□□□ -0.63
FAM239A-202ENST00000438107 DNAH6Q9C0G6 4158 aa11.11□□□□□ -0.63
FAM239A-202ENST00000438107 KRTAP13-2Q52LG2 175 aa11.11□□□□□ -0.63
FAM239A-202ENST00000438107 Q6ZSA8 131 aa11.09□□□□□ -0.63
FAM239A-202ENST00000438107 DMAC1Q96GE9 116 aa11.09□□□□□ -0.63
FAM239A-202ENST00000438107 PRR26Q8N8Z3 221 aa11.07□□□□□ -0.64
FAM239A-202ENST00000438107 SPTSSBQ8NFR3 76 aa11.07□□□□□ -0.64
FAM239A-202ENST00000438107 IGKV2-30P06310 120 aa11.06□□□□□ -0.64
FAM239A-202ENST00000438107 DNAH5Q8TE73 4624 aa11.05□□□□□ -0.64
FAM239A-202ENST00000438107 DNAH11Q96DT5 4516 aa11.04□□□□□ -0.64
FAM239A-202ENST00000438107 KRTAP16-1A8MUX0 517 aa11.03□□□□□ -0.64
FAM239A-202ENST00000438107 SPINK7P58062 85 aa11.02□□□□□ -0.65
FAM239A-202ENST00000438107 KRTAP10-1P60331 282 aa11□□□□□ -0.65
FAM239A-202ENST00000438107 HYDINQ4G0P3 5121 aa10.99□□□□□ -0.65
FAM239A-202ENST00000438107 A6NN06 94 aa10.99□□□□□ -0.65
FAM239A-202ENST00000438107 KRTAP1-4P0C5Y4 121 aa10.99□□□□□ -0.65
FAM239A-202ENST00000438107 KTN1-AS1Q86SY8 53 aa10.99□□□□□ -0.65
FAM239A-202ENST00000438107 SEC61GP60059 68 aa10.97□□□□□ -0.65
FAM239A-202ENST00000438107 RETNLBQ9BQ08 111 aa10.96□□□□□ -0.65
FAM239A-202ENST00000438107 PKD1P98161 4303 aa10.91□□□□□ -0.66
FAM239A-202ENST00000438107 FAT2Q9NYQ8 4349 aa10.91□□□□□ -0.66
FAM239A-202ENST00000438107 C4orf48Q5BLP8 95 aa10.89□□□□□ -0.67
FAM239A-202ENST00000438107 SPINK1P00995 79 aa10.86□□□□□ -0.67
FAM239A-202ENST00000438107 LRP1BQ9NZR2 4599 aa10.85□□□□□ -0.67
FAM239A-202ENST00000438107 TYMSOSQ8TAI1 123 aa10.85□□□□□ -0.67
FAM239A-202ENST00000438107 A0A1B0GU69 56 aa10.84□□□□□ -0.67
FAM239A-202ENST00000438107 PLA2G1BP04054 148 aaKnown RBP10.84□□□□□ -0.67
FAM239A-202ENST00000438107 IGKV2D-30A0A075B6S6 120 aa10.83□□□□□ -0.68
FAM239A-202ENST00000438107 C7orf65Q6ZTY9 151 aa10.79□□□□□ -0.68
FAM239A-202ENST00000438107 RPS29P62273 56 aaKnown RBP10.78□□□□□ -0.68
FAM239A-202ENST00000438107 SACSQ9NZJ4 4579 aa10.74□□□□□ -0.69
FAM239A-202ENST00000438107 SPATA8Q6RVD6 105 aa10.73□□□□□ -0.69
FAM239A-202ENST00000438107 VPS13BQ7Z7G8 4022 aa10.72□□□□□ -0.69
FAM239A-202ENST00000438107 LINC00304Q8N9R0 145 aa10.7□□□□□ -0.7
FAM239A-202ENST00000438107 RBM12B-AS1Q9P1G2 102 aa10.69□□□□□ -0.7
FAM239A-202ENST00000438107 PKHD1P08F94 4074 aa10.69□□□□□ -0.7
FAM239A-202ENST00000438107 UQCR11O14957 56 aa10.68□□□□□ -0.7
FAM239A-202ENST00000438107 MIR22HGQ0VDD5 57 aa10.65□□□□□ -0.71
FAM239A-202ENST00000438107 Q8N1X5 172 aa10.56□□□□□ -0.72
FAM239A-202ENST00000438107 A8MUU9 505 aa10.53□□□□□ -0.72
FAM239A-202ENST00000438107 C20orf166-AS1Q96NR2 134 aa10.53□□□□□ -0.72
FAM239A-202ENST00000438107 DYNC1H1Q14204 4646 aaKnown RBP10.5□□□□□ -0.73
FAM239A-202ENST00000438107 A0A1B0GVY2 172 aa10.49□□□□□ -0.73
FAM239A-202ENST00000438107 SMR3BP02814 79 aaPredicted RBP10.48□□□□□ -0.73
FAM239A-202ENST00000438107 KMT2CQ8NEZ4 4911 aaKnown RBP10.45□□□□□ -0.74
FAM239A-202ENST00000438107 RYR2Q92736 4967 aa10.45□□□□□ -0.74
FAM239A-202ENST00000438107 C9orf92A6NGG3 77 aa10.43□□□□□ -0.74
FAM239A-202ENST00000438107 KRTAP10-4P60372 401 aaPredicted RBP10.42□□□□□ -0.74
FAM239A-202ENST00000438107 PKHD1L1Q86WI1 4243 aa10.39□□□□□ -0.75
FAM239A-202ENST00000438107 PRAC1Q96KF2 57 aa10.39□□□□□ -0.75
FAM239A-202ENST00000438107 APOBP04114 4563 aaKnown RBP10.38□□□□□ -0.75
FAM239A-202ENST00000438107 ADM2Q7Z4H4 148 aa10.36□□□□□ -0.75
FAM239A-202ENST00000438107 FAT1Q14517 4588 aa10.36□□□□□ -0.75
FAM239A-202ENST00000438107 KRTAP3-1Q9BYR8 98 aa10.36□□□□□ -0.75
FAM239A-202ENST00000438107 H0YAA0 97 aa10.26□□□□□ -0.77
FAM239A-202ENST00000438107 A0A1B0GU33 70 aa10.24□□□□□ -0.77
FAM239A-202ENST00000438107 COX6B2Q6YFQ2 88 aa10.23□□□□□ -0.77
FAM239A-202ENST00000438107 H1FX-AS1Q4G0G2 97 aa10.21□□□□□ -0.78
FAM239A-202ENST00000438107 LINC01554Q52M75 96 aa10.16□□□□□ -0.78
FAM239A-202ENST00000438107 RYR3Q15413 4870 aa10.15□□□□□ -0.78
FAM239A-202ENST00000438107 CSAG1Q6PB30 78 aa10.12□□□□□ -0.79
FAM239A-202ENST00000438107 FLG2Q5D862 2391 aaPredicted RBP10.11□□□□□ -0.79
FAM239A-202ENST00000438107 KRTAP10-8P60410 259 aa10.05□□□□□ -0.8
FAM239A-202ENST00000438107 HSPG2P98160 4391 aa10.03□□□□□ -0.8
FAM239A-202ENST00000438107 RPL37P61927 97 aaKnown RBP10.01□□□□□ -0.81
FAM239A-202ENST00000438107 Q5VSD8 79 aa9.99□□□□□ -0.81
FAM239A-202ENST00000438107 LRP1Q07954 4544 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms