RNA–Protein interactions for RNA: ENST00000435815.1

SNRPEP4-201, Transcript of small nuclear ribonucleoprotein polypeptide E pseudogene 4, humanhuman

BASIC

Gene SNRPEP4, Length 279 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP4-201ENST00000435815 ZFHX4Q86UP3 3567 aa0.71□□□□□ -2.3
SNRPEP4-201ENST00000435815 M0R2T5 61 aa0.71□□□□□ -2.3
SNRPEP4-201ENST00000435815 PRM1P04553 51 aa0.71□□□□□ -2.3
SNRPEP4-201ENST00000435815 DEFB1P60022 68 aa0.71□□□□□ -2.3
SNRPEP4-201ENST00000435815 TMEM167AQ8TBQ9 72 aa0.71□□□□□ -2.3
SNRPEP4-201ENST00000435815 AKAP9Q99996 3911 aa0.71□□□□□ -2.3
SNRPEP4-201ENST00000435815 SRCAPQ6ZRS2 3230 aa0.7□□□□□ -2.3
SNRPEP4-201ENST00000435815 A8MTW9 85 aa0.7□□□□□ -2.3
SNRPEP4-201ENST00000435815 K7EIM0 57 aa0.7□□□□□ -2.3
SNRPEP4-201ENST00000435815 CD52P31358 61 aa0.7□□□□□ -2.3
SNRPEP4-201ENST00000435815 TOMM7Q9P0U1 55 aa0.7□□□□□ -2.3
SNRPEP4-201ENST00000435815 DCHS1Q96JQ0 3298 aa0.69□□□□□ -2.3
SNRPEP4-201ENST00000435815 KMT2AQ03164 3969 aa0.69□□□□□ -2.3
SNRPEP4-201ENST00000435815 DNAH14Q0VDD8 3507 aa0.69□□□□□ -2.3
SNRPEP4-201ENST00000435815 VPS13BQ7Z7G8 4022 aa0.69□□□□□ -2.3
SNRPEP4-201ENST00000435815 PKD1L2Q7Z442 2459 aa0.69□□□□□ -2.3
SNRPEP4-201ENST00000435815 M0QY20 66 aa0.69□□□□□ -2.3
SNRPEP4-201ENST00000435815 NOP10Q9NPE3 64 aaKnown RBP0.69□□□□□ -2.3
SNRPEP4-201ENST00000435815 CEP350Q5VT06 3117 aa0.69□□□□□ -2.3
SNRPEP4-201ENST00000435815 UNC80Q8N2C7 3258 aa0.69□□□□□ -2.3
SNRPEP4-201ENST00000435815 SPENQ96T58 3664 aaKnown RBP0.69□□□□□ -2.3
SNRPEP4-201ENST00000435815 PDZD2O15018 2839 aa0.69□□□□□ -2.3
SNRPEP4-201ENST00000435815 SPEGQ15772 3267 aa0.69□□□□□ -2.3
SNRPEP4-201ENST00000435815 CFAP47Q6ZTR5 3102 aa0.68□□□□□ -2.3
SNRPEP4-201ENST00000435815 UBR5O95071 2799 aaPredicted RBP0.68□□□□□ -2.3
SNRPEP4-201ENST00000435815 SPINK1P00995 79 aa0.68□□□□□ -2.3
SNRPEP4-201ENST00000435815 DMDP11532 3685 aa0.68□□□□□ -2.3
SNRPEP4-201ENST00000435815 NOTCH1P46531 2555 aa0.68□□□□□ -2.3
SNRPEP4-201ENST00000435815 HUWE1Q7Z6Z7 4374 aaKnown RBP0.68□□□□□ -2.3
SNRPEP4-201ENST00000435815 MKI67P46013 3256 aaKnown RBP0.67□□□□□ -2.3
SNRPEP4-201ENST00000435815 DNAH11Q96DT5 4516 aa0.67□□□□□ -2.3
SNRPEP4-201ENST00000435815 CHD8Q9HCK8 2581 aa0.67□□□□□ -2.3
SNRPEP4-201ENST00000435815 CLPSL2Q6UWE3 100 aa0.67□□□□□ -2.3
SNRPEP4-201ENST00000435815 DEFB108BQ8NET1 73 aa0.67□□□□□ -2.3
SNRPEP4-201ENST00000435815 XIRP2A4UGR9 3374 aa0.67□□□□□ -2.3
SNRPEP4-201ENST00000435815 WDFY3Q8IZQ1 3526 aa0.67□□□□□ -2.3
SNRPEP4-201ENST00000435815 RANBP2P49792 3224 aaKnown RBP0.66□□□□□ -2.3
SNRPEP4-201ENST00000435815 U3KQA8 63 aa0.66□□□□□ -2.3
SNRPEP4-201ENST00000435815 CSMD1Q96PZ7 3565 aa0.66□□□□□ -2.3
SNRPEP4-201ENST00000435815 CFAP54Q96N23 3096 aa0.66□□□□□ -2.3
SNRPEP4-201ENST00000435815 SRRM2Q9UQ35 2752 aaKnown RBP0.66□□□□□ -2.3
SNRPEP4-201ENST00000435815 SMG1Q96Q15 3661 aaKnown RBP0.66□□□□□ -2.3
SNRPEP4-201ENST00000435815 PKD1L1Q8TDX9 2849 aa0.65□□□□□ -2.3
SNRPEP4-201ENST00000435815 MGAQ8IWI9 3026 aa0.65□□□□□ -2.3
SNRPEP4-201ENST00000435815 VPS13AQ96RL7 3174 aa0.65□□□□□ -2.31
SNRPEP4-201ENST00000435815 HTN1P15515 57 aa0.65□□□□□ -2.31
SNRPEP4-201ENST00000435815 NBASA2RRP1 2371 aa0.64□□□□□ -2.31
SNRPEP4-201ENST00000435815 CHD7Q9P2D1 2997 aa0.64□□□□□ -2.31
SNRPEP4-201ENST00000435815 LAMA5O15230 3695 aa0.64□□□□□ -2.31
SNRPEP4-201ENST00000435815 CREBBPQ92793 2442 aa0.64□□□□□ -2.31
SNRPEP4-201ENST00000435815 SACSQ9NZJ4 4579 aa0.64□□□□□ -2.31
SNRPEP4-201ENST00000435815 DEFB136Q30KP8 78 aa0.64□□□□□ -2.31
SNRPEP4-201ENST00000435815 DEFB133Q30KQ1 61 aa0.64□□□□□ -2.31
SNRPEP4-201ENST00000435815 WDFY4Q6ZS81 3184 aa0.64□□□□□ -2.31
SNRPEP4-201ENST00000435815 VCANP13611 3396 aa0.64□□□□□ -2.31
SNRPEP4-201ENST00000435815 MYCBP2O75592 4640 aa0.64□□□□□ -2.31
SNRPEP4-201ENST00000435815 BRCA2P51587 3418 aa0.64□□□□□ -2.31
SNRPEP4-201ENST00000435815 PKD1P98161 4303 aa0.63□□□□□ -2.31
SNRPEP4-201ENST00000435815 RHPN1-AS1Q9BWJ2 59 aa0.63□□□□□ -2.31
SNRPEP4-201ENST00000435815 VPS13DQ5THJ4 4388 aa0.63□□□□□ -2.31
SNRPEP4-201ENST00000435815 MAP1BP46821 2468 aaKnown RBP0.63□□□□□ -2.31
SNRPEP4-201ENST00000435815 RELNP78509 3460 aa0.63□□□□□ -2.31
SNRPEP4-201ENST00000435815 ZZEF1O43149 2961 aa0.63□□□□□ -2.31
SNRPEP4-201ENST00000435815 Q9Y3F1 56 aa0.62□□□□□ -2.31
SNRPEP4-201ENST00000435815 CUBNO60494 3623 aa0.62□□□□□ -2.31
SNRPEP4-201ENST00000435815 WNK1Q9H4A3 2382 aa0.62□□□□□ -2.31
SNRPEP4-201ENST00000435815 LRP1Q07954 4544 aaKnown RBP0.62□□□□□ -2.31
SNRPEP4-201ENST00000435815 UNC79Q9P2D8 2635 aa0.62□□□□□ -2.31
SNRPEP4-201ENST00000435815 WDR87Q6ZQQ6 2873 aa0.62□□□□□ -2.31
SNRPEP4-201ENST00000435815 ZFYVE26Q68DK2 2539 aa0.62□□□□□ -2.31
SNRPEP4-201ENST00000435815 HECTD4Q9Y4D8 3996 aa0.62□□□□□ -2.31
SNRPEP4-201ENST00000435815 TRRAPQ9Y4A5 3859 aa0.62□□□□□ -2.31
SNRPEP4-201ENST00000435815 C5orf42Q9H799 3197 aa0.61□□□□□ -2.31
SNRPEP4-201ENST00000435815 DNAH1Q9P2D7 4330 aa0.61□□□□□ -2.31
SNRPEP4-201ENST00000435815 A0A096LPF7 62 aa0.61□□□□□ -2.31
SNRPEP4-201ENST00000435815 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
SNRPEP4-201ENST00000435815 CMYA5Q8N3K9 4069 aa0.61□□□□□ -2.31
SNRPEP4-201ENST00000435815 LAMA3Q16787 3333 aa0.61□□□□□ -2.31
SNRPEP4-201ENST00000435815 DNAH3Q8TD57 4116 aa0.61□□□□□ -2.31
SNRPEP4-201ENST00000435815 PRUNE2Q8WUY3 3088 aa0.61□□□□□ -2.31
SNRPEP4-201ENST00000435815 CDH23Q9H251 3354 aa0.6□□□□□ -2.31
SNRPEP4-201ENST00000435815 MYO15AQ9UKN7 3530 aa0.6□□□□□ -2.31
SNRPEP4-201ENST00000435815 LAMA2P24043 3122 aaKnown RBP0.6□□□□□ -2.31
SNRPEP4-201ENST00000435815 ASPMQ8IZT6 3477 aa0.6□□□□□ -2.31
SNRPEP4-201ENST00000435815 VPS13CQ709C8 3753 aa0.6□□□□□ -2.31
SNRPEP4-201ENST00000435815 NAV2Q8IVL1 2488 aa0.6□□□□□ -2.31
SNRPEP4-201ENST00000435815 LOC400499M0QZD8 3231 aa0.6□□□□□ -2.31
SNRPEP4-201ENST00000435815 NF1P21359 2839 aa0.6□□□□□ -2.31
SNRPEP4-201ENST00000435815 DNAH12Q6ZR08 3092 aa0.59□□□□□ -2.31
SNRPEP4-201ENST00000435815 PKHD1L1Q86WI1 4243 aa0.59□□□□□ -2.31
SNRPEP4-201ENST00000435815 FREM2Q5SZK8 3169 aa0.59□□□□□ -2.31
SNRPEP4-201ENST00000435815 FRYLO94915 3013 aa0.59□□□□□ -2.31
SNRPEP4-201ENST00000435815 A0A096LNI7 61 aa0.59□□□□□ -2.31
SNRPEP4-201ENST00000435815 HIVEP3Q5T1R4 2406 aa0.59□□□□□ -2.32
SNRPEP4-201ENST00000435815 BOD1L1Q8NFC6 3051 aa0.59□□□□□ -2.32
SNRPEP4-201ENST00000435815 HSPG2P98160 4391 aa0.59□□□□□ -2.32
SNRPEP4-201ENST00000435815 EP400Q96L91 3159 aa0.59□□□□□ -2.32
SNRPEP4-201ENST00000435815 ACANP16112 2415 aa0.58□□□□□ -2.32
SNRPEP4-201ENST00000435815 CEP250Q9BV73 2442 aa0.58□□□□□ -2.32
SNRPEP4-201ENST00000435815 ANK3Q12955 4377 aaKnown RBP0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms