RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 DNAH11Q96DT5 4516 aa6.39□□□□□ -1.39
SCAF4-203ENST00000434667 KRTAP24-1Q3LI83 254 aa6.39□□□□□ -1.39
SCAF4-203ENST00000434667 RTL8CO15255 209 aa6.38□□□□□ -1.39
SCAF4-203ENST00000434667 C9orf163Q8N9P6 203 aa6.38□□□□□ -1.39
SCAF4-203ENST00000434667 TGP01266 2768 aa6.38□□□□□ -1.39
SCAF4-203ENST00000434667 C8orf17Q9NRJ1 99 aa6.37□□□□□ -1.39
SCAF4-203ENST00000434667 C7orf65Q6ZTY9 151 aa6.36□□□□□ -1.39
SCAF4-203ENST00000434667 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
SCAF4-203ENST00000434667 SPACA4Q8TDM5 124 aa6.36□□□□□ -1.39
SCAF4-203ENST00000434667 KMT2AQ03164 3969 aa6.36□□□□□ -1.39
SCAF4-203ENST00000434667 C14orf177Q52M58 125 aa6.35□□□□□ -1.39
SCAF4-203ENST00000434667 C4orf48Q5BLP8 95 aa6.35□□□□□ -1.39
SCAF4-203ENST00000434667 CRIPTQ9P021 101 aa6.34□□□□□ -1.4
SCAF4-203ENST00000434667 MRPL34Q9BQ48 92 aaKnown RBP6.33□□□□□ -1.4
SCAF4-203ENST00000434667 FAT2Q9NYQ8 4349 aa6.33□□□□□ -1.4
SCAF4-203ENST00000434667 CDC42SE1Q9NRR8 79 aa6.33□□□□□ -1.4
SCAF4-203ENST00000434667 DNAH5Q8TE73 4624 aa6.32□□□□□ -1.4
SCAF4-203ENST00000434667 ACYP2P14621 99 aa6.32□□□□□ -1.4
SCAF4-203ENST00000434667 LINC00313P59037 77 aa6.32□□□□□ -1.4
SCAF4-203ENST00000434667 SPANXA2-OT1Q8N9U9 137 aa6.32□□□□□ -1.4
SCAF4-203ENST00000434667 Q96NJ1 140 aa6.31□□□□□ -1.4
SCAF4-203ENST00000434667 HRES1P13985 223 aa6.31□□□□□ -1.4
SCAF4-203ENST00000434667 IGLV7-46A0A075B6I9 117 aa6.3□□□□□ -1.4
SCAF4-203ENST00000434667 C8orf87E5RJ46 101 aa6.3□□□□□ -1.4
SCAF4-203ENST00000434667 LY6G6CO95867 125 aa6.3□□□□□ -1.4
SCAF4-203ENST00000434667 TP53AIP1Q9HCN2 124 aa6.3□□□□□ -1.4
SCAF4-203ENST00000434667 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.3□□□□□ -1.4
SCAF4-203ENST00000434667 H3BPC8 53 aa6.3□□□□□ -1.4
SCAF4-203ENST00000434667 H3BS24 57 aa6.28□□□□□ -1.4
SCAF4-203ENST00000434667 A0A1B0GVX0 72 aa6.28□□□□□ -1.4
SCAF4-203ENST00000434667 Q75L30 129 aa6.28□□□□□ -1.4
SCAF4-203ENST00000434667 KRTAP21-3Q3LHN1 58 aa6.27□□□□□ -1.41
SCAF4-203ENST00000434667 Q5W150 140 aa6.27□□□□□ -1.41
SCAF4-203ENST00000434667 Q8N1X5 172 aa6.27□□□□□ -1.41
SCAF4-203ENST00000434667 DNHD1Q96M86 4753 aa6.27□□□□□ -1.41
SCAF4-203ENST00000434667 MIR22HGQ0VDD5 57 aa6.26□□□□□ -1.41
SCAF4-203ENST00000434667 A6NN06 94 aa6.25□□□□□ -1.41
SCAF4-203ENST00000434667 IGLV5-52A0A0A0MRZ9 124 aa6.24□□□□□ -1.41
SCAF4-203ENST00000434667 ZNF706Q9Y5V0 76 aaPredicted RBP6.24□□□□□ -1.41
SCAF4-203ENST00000434667 SPRR1BP22528 89 aa6.24□□□□□ -1.41
SCAF4-203ENST00000434667 PSORS1C2Q9UIG4 136 aa6.23□□□□□ -1.41
SCAF4-203ENST00000434667 UQCR11O14957 56 aa6.22□□□□□ -1.41
SCAF4-203ENST00000434667 CSAG1Q6PB30 78 aa6.22□□□□□ -1.41
SCAF4-203ENST00000434667 MEGF8Q7Z7M0 2845 aa6.22□□□□□ -1.41
SCAF4-203ENST00000434667 SSBP3-AS1Q7Z2R9 100 aa6.21□□□□□ -1.42
SCAF4-203ENST00000434667 KRTAP13-1Q8IUC0 172 aa6.21□□□□□ -1.42
SCAF4-203ENST00000434667 LINC01558Q9Y6Z2 57 aa6.2□□□□□ -1.42
SCAF4-203ENST00000434667 Q6ZR54 194 aa6.19□□□□□ -1.42
SCAF4-203ENST00000434667 PKHD1P08F94 4074 aa6.19□□□□□ -1.42
SCAF4-203ENST00000434667 LINC01554Q52M75 96 aa6.18□□□□□ -1.42
SCAF4-203ENST00000434667 NBDYA0A0U1RRE5 68 aa6.18□□□□□ -1.42
SCAF4-203ENST00000434667 APLNQ9ULZ1 77 aa6.18□□□□□ -1.42
SCAF4-203ENST00000434667 WWC2-AS2Q96NR7 200 aa6.17□□□□□ -1.42
SCAF4-203ENST00000434667 ASB16-AS1Q495Z4 193 aa6.17□□□□□ -1.42
SCAF4-203ENST00000434667 PLAC8Q9NZF1 115 aa6.16□□□□□ -1.42
SCAF4-203ENST00000434667 PKHD1L1Q86WI1 4243 aa6.16□□□□□ -1.42
SCAF4-203ENST00000434667 K7ERS5 55 aa6.15□□□□□ -1.43
SCAF4-203ENST00000434667 HYDINQ4G0P3 5121 aa6.13□□□□□ -1.43
SCAF4-203ENST00000434667 C9orf92A6NGG3 77 aa6.13□□□□□ -1.43
SCAF4-203ENST00000434667 SACSQ9NZJ4 4579 aa6.12□□□□□ -1.43
SCAF4-203ENST00000434667 ZNF861PO60384 105 aa6.12□□□□□ -1.43
SCAF4-203ENST00000434667 Q6ZRN7 208 aaPredicted RBP6.11□□□□□ -1.43
SCAF4-203ENST00000434667 A0A0D9SG42 100 aa6.11□□□□□ -1.43
SCAF4-203ENST00000434667 FAM229AH3BQW9 127 aa6.1□□□□□ -1.43
SCAF4-203ENST00000434667 VPS13BQ7Z7G8 4022 aa6.1□□□□□ -1.43
SCAF4-203ENST00000434667 SPINT4Q6UDR6 99 aa6.09□□□□□ -1.43
SCAF4-203ENST00000434667 C1orf134Q5TEV5 83 aa6.09□□□□□ -1.44
SCAF4-203ENST00000434667 A0A087WTM6 91 aa6.07□□□□□ -1.44
SCAF4-203ENST00000434667 LINC00483Q53H64 154 aa6.07□□□□□ -1.44
SCAF4-203ENST00000434667 KRTAP13-3Q3SY46 172 aa6.06□□□□□ -1.44
SCAF4-203ENST00000434667 SMR3BP02814 79 aaPredicted RBP6.05□□□□□ -1.44
SCAF4-203ENST00000434667 PLA2G1BP04054 148 aaKnown RBP6.05□□□□□ -1.44
SCAF4-203ENST00000434667 NUPR2A6NF83 97 aa6.03□□□□□ -1.44
SCAF4-203ENST00000434667 LRP1BQ9NZR2 4599 aa6.03□□□□□ -1.44
SCAF4-203ENST00000434667 TYMSOSQ8TAI1 123 aa6.02□□□□□ -1.45
SCAF4-203ENST00000434667 IGLV7-43P04211 117 aa6.01□□□□□ -1.45
SCAF4-203ENST00000434667 APOBP04114 4563 aaKnown RBP5.99□□□□□ -1.45
SCAF4-203ENST00000434667 SPATA8Q6RVD6 105 aa5.98□□□□□ -1.45
SCAF4-203ENST00000434667 DMAC1Q96GE9 116 aa5.97□□□□□ -1.45
SCAF4-203ENST00000434667 KRTAP13-2Q52LG2 175 aa5.94□□□□□ -1.46
SCAF4-203ENST00000434667 KRTAP10-2P60368 255 aa5.93□□□□□ -1.46
SCAF4-203ENST00000434667 A0A1B0GU33 70 aa5.92□□□□□ -1.46
SCAF4-203ENST00000434667 HSPG2P98160 4391 aa5.89□□□□□ -1.47
SCAF4-203ENST00000434667 KRTAP16-1A8MUX0 517 aa5.87□□□□□ -1.47
SCAF4-203ENST00000434667 TNXBP22105 4242 aa5.86□□□□□ -1.47
SCAF4-203ENST00000434667 LINC00304Q8N9R0 145 aa5.82□□□□□ -1.48
SCAF4-203ENST00000434667 FAT3Q8TDW7 4589 aa5.8□□□□□ -1.48
SCAF4-203ENST00000434667 KRTAP10-1P60331 282 aa5.8□□□□□ -1.48
SCAF4-203ENST00000434667 DYNC1H1Q14204 4646 aaKnown RBP5.77□□□□□ -1.49
SCAF4-203ENST00000434667 Q6ZSA8 131 aa5.77□□□□□ -1.49
SCAF4-203ENST00000434667 H0YAA0 97 aa5.76□□□□□ -1.49
SCAF4-203ENST00000434667 KRTAP1-4P0C5Y4 121 aa5.76□□□□□ -1.49
SCAF4-203ENST00000434667 FAT1Q14517 4588 aa5.75□□□□□ -1.49
SCAF4-203ENST00000434667 RYR2Q92736 4967 aa5.73□□□□□ -1.49
SCAF4-203ENST00000434667 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
SCAF4-203ENST00000434667 C10orf95Q9H7T3 257 aa5.72□□□□□ -1.49
SCAF4-203ENST00000434667 NDUFAF8A1L188 74 aa5.71□□□□□ -1.5
SCAF4-203ENST00000434667 ROMO1P60602 79 aa5.71□□□□□ -1.5
SCAF4-203ENST00000434667 A8MUU9 505 aa5.7□□□□□ -1.5
SCAF4-203ENST00000434667 H1FX-AS1Q4G0G2 97 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms