RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 FBN2P35556 2912 aa11.47□□□□□ -0.57
HCG18-235ENST00000426882 TENM4Q6N022 2769 aa11.46□□□□□ -0.58
HCG18-235ENST00000426882 CSAG1Q6PB30 78 aa11.46□□□□□ -0.58
HCG18-235ENST00000426882 S4R3F8 94 aa11.46□□□□□ -0.58
HCG18-235ENST00000426882 Q5VSD8 79 aa11.42□□□□□ -0.58
HCG18-235ENST00000426882 CRYBG3Q68DQ2 2970 aa11.42□□□□□ -0.58
HCG18-235ENST00000426882 MYO15AQ9UKN7 3530 aa11.4□□□□□ -0.58
HCG18-235ENST00000426882 KRTAP13-1Q8IUC0 172 aa11.38□□□□□ -0.59
HCG18-235ENST00000426882 CAMK2N1Q7Z7J9 78 aa11.35□□□□□ -0.59
HCG18-235ENST00000426882 ASB16-AS1Q495Z4 193 aa11.34□□□□□ -0.59
HCG18-235ENST00000426882 KRTAP13-2Q52LG2 175 aa11.25□□□□□ -0.61
HCG18-235ENST00000426882 H1FX-AS1Q4G0G2 97 aa11.24□□□□□ -0.61
HCG18-235ENST00000426882 RPL37P61927 97 aaKnown RBP11.22□□□□□ -0.61
HCG18-235ENST00000426882 R4GN34 69 aa11.22□□□□□ -0.61
HCG18-235ENST00000426882 SEC61BP60468 96 aaKnown RBP11.2□□□□□ -0.62
HCG18-235ENST00000426882 MXRA5Q9NR99 2828 aa11.2□□□□□ -0.62
HCG18-235ENST00000426882 M0R2T5 61 aa11.17□□□□□ -0.62
HCG18-235ENST00000426882 RPS29P62273 56 aaKnown RBP11.15□□□□□ -0.63
HCG18-235ENST00000426882 SPATA8Q6RVD6 105 aa11.14□□□□□ -0.63
HCG18-235ENST00000426882 LUZP6Q538Z0 58 aa11.14□□□□□ -0.63
HCG18-235ENST00000426882 ROMO1P60602 79 aa11.09□□□□□ -0.63
HCG18-235ENST00000426882 RELNP78509 3460 aa11.08□□□□□ -0.64
HCG18-235ENST00000426882 H3BS24 57 aa11.07□□□□□ -0.64
HCG18-235ENST00000426882 M0QZ58 72 aa11.04□□□□□ -0.64
HCG18-235ENST00000426882 WDFY3Q8IZQ1 3526 aa11.02□□□□□ -0.65
HCG18-235ENST00000426882 ADM2Q7Z4H4 148 aa11.01□□□□□ -0.65
HCG18-235ENST00000426882 A8MU10 97 aa10.99□□□□□ -0.65
HCG18-235ENST00000426882 A6NN06 94 aa10.98□□□□□ -0.65
HCG18-235ENST00000426882 DCHS1Q96JQ0 3298 aa10.97□□□□□ -0.65
HCG18-235ENST00000426882 TENM3Q9P273 2699 aa10.97□□□□□ -0.65
HCG18-235ENST00000426882 CELSR1Q9NYQ6 3014 aa10.96□□□□□ -0.66
HCG18-235ENST00000426882 TENM1Q9UKZ4 2725 aa10.87□□□□□ -0.67
HCG18-235ENST00000426882 LAMA5O15230 3695 aa10.82□□□□□ -0.68
HCG18-235ENST00000426882 ZFHX4Q86UP3 3567 aa10.8□□□□□ -0.68
HCG18-235ENST00000426882 A8MUU9 505 aa10.8□□□□□ -0.68
HCG18-235ENST00000426882 ASPMQ8IZT6 3477 aa10.8□□□□□ -0.68
HCG18-235ENST00000426882 KRTAP1-4P0C5Y4 121 aa10.79□□□□□ -0.68
HCG18-235ENST00000426882 C20orf166-AS1Q96NR2 134 aa10.76□□□□□ -0.69
HCG18-235ENST00000426882 KRTAP21-3Q3LHN1 58 aa10.73□□□□□ -0.69
HCG18-235ENST00000426882 KRTAP25-1Q3LHN0 102 aa10.7□□□□□ -0.7
HCG18-235ENST00000426882 TENM2Q9NT68 2774 aa10.68□□□□□ -0.7
HCG18-235ENST00000426882 PDZD2O15018 2839 aa10.67□□□□□ -0.7
HCG18-235ENST00000426882 PKD1L1Q8TDX9 2849 aa10.65□□□□□ -0.7
HCG18-235ENST00000426882 MUC3AQ02505 3323 aa10.65□□□□□ -0.7
HCG18-235ENST00000426882 DMDP11532 3685 aa10.58□□□□□ -0.72
HCG18-235ENST00000426882 PLAC4Q8WY50 150 aa10.58□□□□□ -0.72
HCG18-235ENST00000426882 TGP01266 2768 aa10.56□□□□□ -0.72
HCG18-235ENST00000426882 VWFP04275 2813 aa10.55□□□□□ -0.72
HCG18-235ENST00000426882 FBN1P35555 2871 aaKnown RBP10.55□□□□□ -0.72
HCG18-235ENST00000426882 A0A0A0MQY5 61 aa10.55□□□□□ -0.72
HCG18-235ENST00000426882 KRTAP16-1A8MUX0 517 aa10.53□□□□□ -0.72
HCG18-235ENST00000426882 CSMD1Q96PZ7 3565 aa10.53□□□□□ -0.72
HCG18-235ENST00000426882 XP32Q5T750 250 aa10.47□□□□□ -0.73
HCG18-235ENST00000426882 SMG1Q96Q15 3661 aaKnown RBP10.46□□□□□ -0.73
HCG18-235ENST00000426882 OTOGQ6ZRI0 2925 aa10.41□□□□□ -0.74
HCG18-235ENST00000426882 H0YAA0 97 aa10.35□□□□□ -0.75
HCG18-235ENST00000426882 KRTAP13-3Q3SY46 172 aa10.3□□□□□ -0.76
HCG18-235ENST00000426882 NBPF19A0A087WUL8 3843 aa10.28□□□□□ -0.76
HCG18-235ENST00000426882 SVEP1Q4LDE5 3571 aa10.26□□□□□ -0.77
HCG18-235ENST00000426882 NDUFAF8A1L188 74 aa10.22□□□□□ -0.77
HCG18-235ENST00000426882 TPRXLQ17RH7 258 aa10.19□□□□□ -0.78
HCG18-235ENST00000426882 TNP1P09430 55 aa10.18□□□□□ -0.78
HCG18-235ENST00000426882 C10orf95Q9H7T3 257 aa10.17□□□□□ -0.78
HCG18-235ENST00000426882 ZFHX3Q15911 3703 aa10.16□□□□□ -0.78
HCG18-235ENST00000426882 CUBNO60494 3623 aa10.14□□□□□ -0.79
HCG18-235ENST00000426882 P0C880 135 aa10.1□□□□□ -0.79
HCG18-235ENST00000426882 A0A1B0GVY2 172 aa10.08□□□□□ -0.8
HCG18-235ENST00000426882 CSMD2Q7Z408 3487 aa10.06□□□□□ -0.8
HCG18-235ENST00000426882 KRTAP10-8P60410 259 aa10.06□□□□□ -0.8
HCG18-235ENST00000426882 FBN3Q75N90 2809 aa10.06□□□□□ -0.8
HCG18-235ENST00000426882 SRRM2Q9UQ35 2752 aaKnown RBP10.05□□□□□ -0.8
HCG18-235ENST00000426882 SPENQ96T58 3664 aaKnown RBP10□□□□□ -0.81
HCG18-235ENST00000426882 PP632Q6XCG6 107 aa9.96□□□□□ -0.82
HCG18-235ENST00000426882 ANK3Q12955 4377 aaKnown RBP9.93□□□□□ -0.82
HCG18-235ENST00000426882 TRRAPQ9Y4A5 3859 aa9.86□□□□□ -0.83
HCG18-235ENST00000426882 MEGF8Q7Z7M0 2845 aa9.83□□□□□ -0.84
HCG18-235ENST00000426882 KRTAP3-1Q9BYR8 98 aa9.79□□□□□ -0.84
HCG18-235ENST00000426882 COL7A1Q02388 2944 aa9.75□□□□□ -0.85
HCG18-235ENST00000426882 BSNQ9UPA5 3926 aa9.73□□□□□ -0.85
HCG18-235ENST00000426882 KRTAP10-10P60014 251 aa9.73□□□□□ -0.85
HCG18-235ENST00000426882 KRTAP12-2P59991 146 aa9.69□□□□□ -0.86
HCG18-235ENST00000426882 KRTAP12-1P59990 96 aa9.56□□□□□ -0.88
HCG18-235ENST00000426882 KRTAP10-6P60371 365 aaPredicted RBP9.47□□□□□ -0.89
HCG18-235ENST00000426882 KRTAP13-4Q3LI77 160 aa9.45□□□□□ -0.9
HCG18-235ENST00000426882 PRO2289Q9P1D8 64 aa9.43□□□□□ -0.9
HCG18-235ENST00000426882 VPS13CQ709C8 3753 aa9.4□□□□□ -0.9
HCG18-235ENST00000426882 MT1HL1P0DM35 61 aa9.31□□□□□ -0.92
HCG18-235ENST00000426882 HUWE1Q7Z6Z7 4374 aaKnown RBP9.29□□□□□ -0.92
HCG18-235ENST00000426882 KRTAP10-4P60372 401 aaPredicted RBP9.25□□□□□ -0.93
HCG18-235ENST00000426882 KRTAP3-3Q9BYR6 98 aa9.19□□□□□ -0.94
HCG18-235ENST00000426882 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
HCG18-235ENST00000426882 ZNF469Q96JG9 3925 aaPredicted RBP9.08□□□□□ -0.96
HCG18-235ENST00000426882 CSMD3Q7Z407 3707 aa9.03□□□□□ -0.96
HCG18-235ENST00000426882 KRTAP4-5Q9BYR2 181 aa8.96□□□□□ -0.98
HCG18-235ENST00000426882 DNAH9Q9NYC9 4486 aa8.88□□□□□ -0.99
HCG18-235ENST00000426882 AKAP9Q99996 3911 aa8.83□□□□□ -1
HCG18-235ENST00000426882 KRTAP15-1Q3LI76 137 aa8.79□□□□□ -1
HCG18-235ENST00000426882 DNAH5Q8TE73 4624 aa8.79□□□□□ -1
HCG18-235ENST00000426882 PLECQ15149 4684 aaKnown RBP8.72□□□□□ -1.01
HCG18-235ENST00000426882 DNAH1Q9P2D7 4330 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms