RNA–Protein interactions for RNA: ENST00000426508.6

IFT140-203, Transcript of intraflagellar transport 140, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IFT140, Length 5,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-203ENST00000426508 Q5VSD8 79 aa9.9□□□□□ -0.82
IFT140-203ENST00000426508 SPINK7P58062 85 aa9.89□□□□□ -0.83
IFT140-203ENST00000426508 CRIPTQ9P021 101 aa9.88□□□□□ -0.83
IFT140-203ENST00000426508 KRTAP11-1Q8IUC1 163 aa9.87□□□□□ -0.83
IFT140-203ENST00000426508 ZFHX4Q86UP3 3567 aa9.87□□□□□ -0.83
IFT140-203ENST00000426508 A0A1B0GU33 70 aa9.85□□□□□ -0.83
IFT140-203ENST00000426508 COX6B2Q6YFQ2 88 aa9.82□□□□□ -0.84
IFT140-203ENST00000426508 A0A0D9SG42 100 aa9.82□□□□□ -0.84
IFT140-203ENST00000426508 DMAC1Q96GE9 116 aa9.8□□□□□ -0.84
IFT140-203ENST00000426508 A0A087X002 238 aa9.76□□□□□ -0.85
IFT140-203ENST00000426508 PRAC1Q96KF2 57 aa9.75□□□□□ -0.85
IFT140-203ENST00000426508 OTOGQ6ZRI0 2925 aa9.74□□□□□ -0.85
IFT140-203ENST00000426508 Q6ZSA8 131 aa9.72□□□□□ -0.85
IFT140-203ENST00000426508 KRTAP13-1Q8IUC0 172 aa9.71□□□□□ -0.85
IFT140-203ENST00000426508 LINC01554Q52M75 96 aa9.7□□□□□ -0.86
IFT140-203ENST00000426508 NOTCH2NLQ7Z3S9 236 aa9.7□□□□□ -0.86
IFT140-203ENST00000426508 TENM1Q9UKZ4 2725 aa9.68□□□□□ -0.86
IFT140-203ENST00000426508 CELSR1Q9NYQ6 3014 aa9.65□□□□□ -0.86
IFT140-203ENST00000426508 SMG1Q96Q15 3661 aaKnown RBP9.65□□□□□ -0.86
IFT140-203ENST00000426508 TENM3Q9P273 2699 aa9.64□□□□□ -0.87
IFT140-203ENST00000426508 NBPF19A0A087WUL8 3843 aa9.63□□□□□ -0.87
IFT140-203ENST00000426508 ASB16-AS1Q495Z4 193 aa9.62□□□□□ -0.87
IFT140-203ENST00000426508 CSAG1Q6PB30 78 aa9.59□□□□□ -0.87
IFT140-203ENST00000426508 S4R3F8 94 aa9.56□□□□□ -0.88
IFT140-203ENST00000426508 KRTAP13-2Q52LG2 175 aa9.56□□□□□ -0.88
IFT140-203ENST00000426508 RPS29P62273 56 aaKnown RBP9.53□□□□□ -0.88
IFT140-203ENST00000426508 DMBT1Q9UGM3 2413 aaPredicted RBP9.53□□□□□ -0.88
IFT140-203ENST00000426508 BSNQ9UPA5 3926 aa9.52□□□□□ -0.89
IFT140-203ENST00000426508 SPENQ96T58 3664 aaKnown RBP9.5□□□□□ -0.89
IFT140-203ENST00000426508 SPATA8Q6RVD6 105 aa9.5□□□□□ -0.89
IFT140-203ENST00000426508 H1FX-AS1Q4G0G2 97 aa9.49□□□□□ -0.89
IFT140-203ENST00000426508 SEC61BP60468 96 aaKnown RBP9.48□□□□□ -0.89
IFT140-203ENST00000426508 A6NN06 94 aa9.47□□□□□ -0.89
IFT140-203ENST00000426508 VWFP04275 2813 aa9.46□□□□□ -0.89
IFT140-203ENST00000426508 ANK3Q12955 4377 aaKnown RBP9.46□□□□□ -0.9
IFT140-203ENST00000426508 CSMD1Q96PZ7 3565 aa9.44□□□□□ -0.9
IFT140-203ENST00000426508 RPL37P61927 97 aaKnown RBP9.42□□□□□ -0.9
IFT140-203ENST00000426508 TENM2Q9NT68 2774 aa9.4□□□□□ -0.9
IFT140-203ENST00000426508 A8MU10 97 aa9.4□□□□□ -0.91
IFT140-203ENST00000426508 FBN1P35555 2871 aaKnown RBP9.38□□□□□ -0.91
IFT140-203ENST00000426508 ROMO1P60602 79 aa9.37□□□□□ -0.91
IFT140-203ENST00000426508 ZFHX3Q15911 3703 aa9.36□□□□□ -0.91
IFT140-203ENST00000426508 SVEP1Q4LDE5 3571 aa9.33□□□□□ -0.92
IFT140-203ENST00000426508 FLG2Q5D862 2391 aaPredicted RBP9.32□□□□□ -0.92
IFT140-203ENST00000426508 CAMK2N1Q7Z7J9 78 aa9.32□□□□□ -0.92
IFT140-203ENST00000426508 KRTAP1-4P0C5Y4 121 aa9.3□□□□□ -0.92
IFT140-203ENST00000426508 CSMD2Q7Z408 3487 aa9.29□□□□□ -0.92
IFT140-203ENST00000426508 M0R2T5 61 aa9.27□□□□□ -0.92
IFT140-203ENST00000426508 H3BS24 57 aa9.27□□□□□ -0.93
IFT140-203ENST00000426508 LUZP6Q538Z0 58 aa9.26□□□□□ -0.93
IFT140-203ENST00000426508 R4GN34 69 aa9.26□□□□□ -0.93
IFT140-203ENST00000426508 PKD1L1Q8TDX9 2849 aa9.23□□□□□ -0.93
IFT140-203ENST00000426508 ADM2Q7Z4H4 148 aa9.18□□□□□ -0.94
IFT140-203ENST00000426508 TGP01266 2768 aa9.18□□□□□ -0.94
IFT140-203ENST00000426508 M0QZ58 72 aa9.15□□□□□ -0.95
IFT140-203ENST00000426508 KRTAP25-1Q3LHN0 102 aa9.14□□□□□ -0.95
IFT140-203ENST00000426508 A0A1B0GVY2 172 aa9.13□□□□□ -0.95
IFT140-203ENST00000426508 A8MUU9 505 aa9.1□□□□□ -0.95
IFT140-203ENST00000426508 C20orf166-AS1Q96NR2 134 aa9.08□□□□□ -0.96
IFT140-203ENST00000426508 TRRAPQ9Y4A5 3859 aa9.07□□□□□ -0.96
IFT140-203ENST00000426508 KRTAP16-1A8MUX0 517 aa8.96□□□□□ -0.98
IFT140-203ENST00000426508 XP32Q5T750 250 aa8.93□□□□□ -0.98
IFT140-203ENST00000426508 CUBNO60494 3623 aa8.88□□□□□ -0.99
IFT140-203ENST00000426508 KRTAP10-8P60410 259 aa8.85□□□□□ -0.99
IFT140-203ENST00000426508 A0A0A0MQY5 61 aa8.85□□□□□ -0.99
IFT140-203ENST00000426508 KRTAP13-3Q3SY46 172 aa8.85□□□□□ -0.99
IFT140-203ENST00000426508 TPRXLQ17RH7 258 aa8.84□□□□□ -0.99
IFT140-203ENST00000426508 FBN3Q75N90 2809 aa8.83□□□□□ -1
IFT140-203ENST00000426508 H0YAA0 97 aa8.81□□□□□ -1
IFT140-203ENST00000426508 VPS13CQ709C8 3753 aa8.78□□□□□ -1
IFT140-203ENST00000426508 ZNF469Q96JG9 3925 aaPredicted RBP8.78□□□□□ -1
IFT140-203ENST00000426508 AKAP9Q99996 3911 aa8.75□□□□□ -1.01
IFT140-203ENST00000426508 HUWE1Q7Z6Z7 4374 aaKnown RBP8.71□□□□□ -1.01
IFT140-203ENST00000426508 PLAC4Q8WY50 150 aa8.71□□□□□ -1.01
IFT140-203ENST00000426508 MEGF8Q7Z7M0 2845 aa8.68□□□□□ -1.02
IFT140-203ENST00000426508 NDUFAF8A1L188 74 aa8.64□□□□□ -1.03
IFT140-203ENST00000426508 C10orf95Q9H7T3 257 aa8.57□□□□□ -1.04
IFT140-203ENST00000426508 COL7A1Q02388 2944 aa8.49□□□□□ -1.05
IFT140-203ENST00000426508 P0C880 135 aa8.47□□□□□ -1.05
IFT140-203ENST00000426508 DNAH9Q9NYC9 4486 aa8.46□□□□□ -1.05
IFT140-203ENST00000426508 TNP1P09430 55 aa8.46□□□□□ -1.05
IFT140-203ENST00000426508 SRRM2Q9UQ35 2752 aaKnown RBP8.45□□□□□ -1.06
IFT140-203ENST00000426508 PP632Q6XCG6 107 aa8.39□□□□□ -1.07
IFT140-203ENST00000426508 KRTAP10-4P60372 401 aaPredicted RBP8.36□□□□□ -1.07
IFT140-203ENST00000426508 ALMS1Q8TCU4 4167 aa8.33□□□□□ -1.08
IFT140-203ENST00000426508 MT1HL1P0DM35 61 aa8.33□□□□□ -1.08
IFT140-203ENST00000426508 KRTAP3-1Q9BYR8 98 aa8.32□□□□□ -1.08
IFT140-203ENST00000426508 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
IFT140-203ENST00000426508 KRTAP10-10P60014 251 aa8.19□□□□□ -1.1
IFT140-203ENST00000426508 DNHD1Q96M86 4753 aa8.18□□□□□ -1.1
IFT140-203ENST00000426508 PLECQ15149 4684 aaKnown RBP8.17□□□□□ -1.1
IFT140-203ENST00000426508 KRTAP4-5Q9BYR2 181 aa8.17□□□□□ -1.1
IFT140-203ENST00000426508 KRTAP12-1P59990 96 aa8.1□□□□□ -1.11
IFT140-203ENST00000426508 DNAH1Q9P2D7 4330 aa8.09□□□□□ -1.11
IFT140-203ENST00000426508 VPS13DQ5THJ4 4388 aa8.06□□□□□ -1.12
IFT140-203ENST00000426508 KRTAP10-6P60371 365 aaPredicted RBP8.06□□□□□ -1.12
IFT140-203ENST00000426508 DNAH5Q8TE73 4624 aa8.04□□□□□ -1.12
IFT140-203ENST00000426508 KRTAP13-4Q3LI77 160 aa8.03□□□□□ -1.12
IFT140-203ENST00000426508 ANK2Q01484 3957 aa8.01□□□□□ -1.13
IFT140-203ENST00000426508 CSMD3Q7Z407 3707 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms