RNA–Protein interactions for RNA: ENST00000417640.6

NECAB1-201, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB1, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-201ENST00000417640 DMBT1Q9UGM3 2413 aaPredicted RBP10.88□□□□□ -0.67
NECAB1-201ENST00000417640 RPL37P61927 97 aaKnown RBP10.87□□□□□ -0.67
NECAB1-201ENST00000417640 H1FX-AS1Q4G0G2 97 aa10.87□□□□□ -0.67
NECAB1-201ENST00000417640 H3BS24 57 aa10.85□□□□□ -0.67
NECAB1-201ENST00000417640 ASH1LQ9NR48 2969 aaKnown RBP10.83□□□□□ -0.68
NECAB1-201ENST00000417640 SPATA8Q6RVD6 105 aa10.82□□□□□ -0.68
NECAB1-201ENST00000417640 MYO15AQ9UKN7 3530 aa10.82□□□□□ -0.68
NECAB1-201ENST00000417640 ROMO1P60602 79 aa10.81□□□□□ -0.68
NECAB1-201ENST00000417640 NIPBLQ6KC79 2804 aaeCLIP10.78□□□□□ -0.68
NECAB1-201ENST00000417640 CELSR2Q9HCU4 2923 aa10.77□□□□□ -0.68
NECAB1-201ENST00000417640 Q6ZRN7 208 aaPredicted RBP10.77□□□□□ -0.69
NECAB1-201ENST00000417640 A6NN06 94 aa10.76□□□□□ -0.69
NECAB1-201ENST00000417640 PLAC4Q8WY50 150 aa10.75□□□□□ -0.69
NECAB1-201ENST00000417640 HRNRQ86YZ3 2850 aaPredicted RBP10.75□□□□□ -0.69
NECAB1-201ENST00000417640 KRTAP13-1Q8IUC0 172 aa10.74□□□□□ -0.69
NECAB1-201ENST00000417640 M0QZ58 72 aa10.72□□□□□ -0.69
NECAB1-201ENST00000417640 KMT2BQ9UMN6 2715 aaPredicted RBP10.69□□□□□ -0.7
NECAB1-201ENST00000417640 CRYBG3Q68DQ2 2970 aa10.65□□□□□ -0.7
NECAB1-201ENST00000417640 NF1P21359 2839 aa10.65□□□□□ -0.71
NECAB1-201ENST00000417640 DCHS2Q6V1P9 2916 aa10.65□□□□□ -0.71
NECAB1-201ENST00000417640 A8MU10 97 aa10.61□□□□□ -0.71
NECAB1-201ENST00000417640 TENM4Q6N022 2769 aa10.61□□□□□ -0.71
NECAB1-201ENST00000417640 RPS29P62273 56 aaKnown RBP10.6□□□□□ -0.71
NECAB1-201ENST00000417640 FBN2P35556 2912 aa10.58□□□□□ -0.72
NECAB1-201ENST00000417640 KRTAP13-2Q52LG2 175 aa10.57□□□□□ -0.72
NECAB1-201ENST00000417640 A0A0A0MQY5 61 aa10.57□□□□□ -0.72
NECAB1-201ENST00000417640 ADM2Q7Z4H4 148 aa10.54□□□□□ -0.72
NECAB1-201ENST00000417640 KRTAP21-3Q3LHN1 58 aa10.5□□□□□ -0.73
NECAB1-201ENST00000417640 KRTAP25-1Q3LHN0 102 aa10.49□□□□□ -0.73
NECAB1-201ENST00000417640 RELNP78509 3460 aa10.45□□□□□ -0.74
NECAB1-201ENST00000417640 MUC3AQ02505 3323 aa10.41□□□□□ -0.74
NECAB1-201ENST00000417640 MXRA5Q9NR99 2828 aa10.4□□□□□ -0.75
NECAB1-201ENST00000417640 WDFY3Q8IZQ1 3526 aa10.37□□□□□ -0.75
NECAB1-201ENST00000417640 DCHS1Q96JQ0 3298 aa10.34□□□□□ -0.75
NECAB1-201ENST00000417640 LAMA5O15230 3695 aa10.33□□□□□ -0.76
NECAB1-201ENST00000417640 A8MUU9 505 aa10.26□□□□□ -0.77
NECAB1-201ENST00000417640 C20orf166-AS1Q96NR2 134 aa10.25□□□□□ -0.77
NECAB1-201ENST00000417640 ASPMQ8IZT6 3477 aa10.24□□□□□ -0.77
NECAB1-201ENST00000417640 DMDP11532 3685 aa10.21□□□□□ -0.77
NECAB1-201ENST00000417640 ZFHX4Q86UP3 3567 aa10.13□□□□□ -0.79
NECAB1-201ENST00000417640 KRTAP16-1A8MUX0 517 aa10.12□□□□□ -0.79
NECAB1-201ENST00000417640 CELSR1Q9NYQ6 3014 aa10.11□□□□□ -0.79
NECAB1-201ENST00000417640 KRTAP1-4P0C5Y4 121 aa10.1□□□□□ -0.79
NECAB1-201ENST00000417640 NDUFAF8A1L188 74 aa10.06□□□□□ -0.8
NECAB1-201ENST00000417640 TENM3Q9P273 2699 aa10.04□□□□□ -0.8
NECAB1-201ENST00000417640 TNP1P09430 55 aa10□□□□□ -0.81
NECAB1-201ENST00000417640 PDZD2O15018 2839 aa10□□□□□ -0.81
NECAB1-201ENST00000417640 TENM1Q9UKZ4 2725 aa9.98□□□□□ -0.81
NECAB1-201ENST00000417640 H0YAA0 97 aa9.97□□□□□ -0.81
NECAB1-201ENST00000417640 XP32Q5T750 250 aa9.85□□□□□ -0.83
NECAB1-201ENST00000417640 OTOGQ6ZRI0 2925 aa9.84□□□□□ -0.83
NECAB1-201ENST00000417640 PKD1L1Q8TDX9 2849 aa9.84□□□□□ -0.83
NECAB1-201ENST00000417640 FBN1P35555 2871 aaKnown RBP9.82□□□□□ -0.84
NECAB1-201ENST00000417640 TENM2Q9NT68 2774 aa9.81□□□□□ -0.84
NECAB1-201ENST00000417640 SMG1Q96Q15 3661 aaKnown RBP9.81□□□□□ -0.84
NECAB1-201ENST00000417640 C10orf95Q9H7T3 257 aa9.81□□□□□ -0.84
NECAB1-201ENST00000417640 KRTAP13-3Q3SY46 172 aa9.81□□□□□ -0.84
NECAB1-201ENST00000417640 VWFP04275 2813 aa9.79□□□□□ -0.84
NECAB1-201ENST00000417640 NBPF19A0A087WUL8 3843 aa9.78□□□□□ -0.84
NECAB1-201ENST00000417640 TGP01266 2768 aa9.78□□□□□ -0.84
NECAB1-201ENST00000417640 CSMD1Q96PZ7 3565 aa9.75□□□□□ -0.85
NECAB1-201ENST00000417640 TPRXLQ17RH7 258 aa9.72□□□□□ -0.85
NECAB1-201ENST00000417640 KRTAP10-8P60410 259 aa9.71□□□□□ -0.85
NECAB1-201ENST00000417640 PP632Q6XCG6 107 aa9.7□□□□□ -0.86
NECAB1-201ENST00000417640 ZFHX3Q15911 3703 aa9.67□□□□□ -0.86
NECAB1-201ENST00000417640 P0C880 135 aa9.63□□□□□ -0.87
NECAB1-201ENST00000417640 SVEP1Q4LDE5 3571 aa9.61□□□□□ -0.87
NECAB1-201ENST00000417640 A0A1B0GVY2 172 aa9.59□□□□□ -0.87
NECAB1-201ENST00000417640 PRO2289Q9P1D8 64 aa9.59□□□□□ -0.87
NECAB1-201ENST00000417640 KRTAP10-10P60014 251 aa9.58□□□□□ -0.88
NECAB1-201ENST00000417640 SPENQ96T58 3664 aaKnown RBP9.54□□□□□ -0.88
NECAB1-201ENST00000417640 CSMD2Q7Z408 3487 aa9.52□□□□□ -0.88
NECAB1-201ENST00000417640 CUBNO60494 3623 aa9.43□□□□□ -0.9
NECAB1-201ENST00000417640 BSNQ9UPA5 3926 aa9.37□□□□□ -0.91
NECAB1-201ENST00000417640 ANK3Q12955 4377 aaKnown RBP9.35□□□□□ -0.91
NECAB1-201ENST00000417640 KRTAP12-2P59991 146 aa9.29□□□□□ -0.92
NECAB1-201ENST00000417640 TRRAPQ9Y4A5 3859 aa9.26□□□□□ -0.93
NECAB1-201ENST00000417640 KRTAP3-1Q9BYR8 98 aa9.26□□□□□ -0.93
NECAB1-201ENST00000417640 SRRM2Q9UQ35 2752 aaKnown RBP9.21□□□□□ -0.93
NECAB1-201ENST00000417640 KRTAP12-1P59990 96 aa9.17□□□□□ -0.94
NECAB1-201ENST00000417640 FBN3Q75N90 2809 aa9.15□□□□□ -0.94
NECAB1-201ENST00000417640 KRTAP13-4Q3LI77 160 aa9.05□□□□□ -0.96
NECAB1-201ENST00000417640 MEGF8Q7Z7M0 2845 aa9.02□□□□□ -0.97
NECAB1-201ENST00000417640 KRTAP10-6P60371 365 aaPredicted RBP9.01□□□□□ -0.97
NECAB1-201ENST00000417640 COL7A1Q02388 2944 aa8.91□□□□□ -0.98
NECAB1-201ENST00000417640 VPS13CQ709C8 3753 aa8.85□□□□□ -0.99
NECAB1-201ENST00000417640 ZNF469Q96JG9 3925 aaPredicted RBP8.73□□□□□ -1.01
NECAB1-201ENST00000417640 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
NECAB1-201ENST00000417640 KRTAP3-3Q9BYR6 98 aa8.69□□□□□ -1.02
NECAB1-201ENST00000417640 HUWE1Q7Z6Z7 4374 aaKnown RBP8.67□□□□□ -1.02
NECAB1-201ENST00000417640 KRTAP15-1Q3LI76 137 aa8.6□□□□□ -1.03
NECAB1-201ENST00000417640 MT1HL1P0DM35 61 aa8.58□□□□□ -1.04
NECAB1-201ENST00000417640 KRTAP10-4P60372 401 aaPredicted RBP8.51□□□□□ -1.05
NECAB1-201ENST00000417640 AKAP9Q99996 3911 aa8.51□□□□□ -1.05
NECAB1-201ENST00000417640 DNAH9Q9NYC9 4486 aa8.37□□□□□ -1.07
NECAB1-201ENST00000417640 CSMD3Q7Z407 3707 aa8.35□□□□□ -1.07
NECAB1-201ENST00000417640 KRTAP4-5Q9BYR2 181 aa8.27□□□□□ -1.09
NECAB1-201ENST00000417640 DNHD1Q96M86 4753 aa8.21□□□□□ -1.09
NECAB1-201ENST00000417640 INE1O15225 51 aa8.19□□□□□ -1.1
NECAB1-201ENST00000417640 PLECQ15149 4684 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms