RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 FRAS1Q86XX4 4008 aa10.69□□□□□ -0.7
SCARB1-203ENST00000415380 LOC101927531A0A1B0GV80 90 aa10.67□□□□□ -0.7
SCARB1-203ENST00000415380 Q75L30 129 aa10.67□□□□□ -0.7
SCARB1-203ENST00000415380 PMAIP1Q13794 54 aa10.66□□□□□ -0.7
SCARB1-203ENST00000415380 DNAH17Q9UFH2 4485 aa10.62□□□□□ -0.71
SCARB1-203ENST00000415380 HRES1P13985 223 aa10.62□□□□□ -0.71
SCARB1-203ENST00000415380 SPINK6Q6UWN8 80 aa10.62□□□□□ -0.71
SCARB1-203ENST00000415380 DNAH2Q9P225 4427 aa10.62□□□□□ -0.71
SCARB1-203ENST00000415380 SPAG11AQ6PDA7 123 aa10.62□□□□□ -0.71
SCARB1-203ENST00000415380 PRKDCP78527 4128 aaKnown RBP10.6□□□□□ -0.71
SCARB1-203ENST00000415380 A6NED7 52 aa10.6□□□□□ -0.71
SCARB1-203ENST00000415380 LCA10Q71F78 164 aa10.6□□□□□ -0.71
SCARB1-203ENST00000415380 LINC01558Q9Y6Z2 57 aa10.59□□□□□ -0.71
SCARB1-203ENST00000415380 Q5W150 140 aa10.58□□□□□ -0.72
SCARB1-203ENST00000415380 KMT2AQ03164 3969 aa10.57□□□□□ -0.72
SCARB1-203ENST00000415380 IGLV7-43P04211 117 aa10.57□□□□□ -0.72
SCARB1-203ENST00000415380 CIRBP-AS1Q8TBR5 109 aa10.57□□□□□ -0.72
SCARB1-203ENST00000415380 KRTAP13-3Q3SY46 172 aa10.56□□□□□ -0.72
SCARB1-203ENST00000415380 FBN3Q75N90 2809 aa10.55□□□□□ -0.72
SCARB1-203ENST00000415380 SPTSSBQ8NFR3 76 aa10.53□□□□□ -0.72
SCARB1-203ENST00000415380 ATP11AUNQ6ZP68 121 aa10.5□□□□□ -0.73
SCARB1-203ENST00000415380 SEC61GP60059 68 aa10.49□□□□□ -0.73
SCARB1-203ENST00000415380 CDC42SE1Q9NRR8 79 aa10.49□□□□□ -0.73
SCARB1-203ENST00000415380 C1orf134Q5TEV5 83 aa10.48□□□□□ -0.73
SCARB1-203ENST00000415380 ALMS1Q8TCU4 4167 aa10.47□□□□□ -0.73
SCARB1-203ENST00000415380 SSBP3-AS1Q7Z2R9 100 aa10.46□□□□□ -0.73
SCARB1-203ENST00000415380 C8orf87E5RJ46 101 aa10.46□□□□□ -0.74
SCARB1-203ENST00000415380 MEGF8Q7Z7M0 2845 aa10.45□□□□□ -0.74
SCARB1-203ENST00000415380 PRR26Q8N8Z3 221 aa10.45□□□□□ -0.74
SCARB1-203ENST00000415380 SPINK7P58062 85 aa10.44□□□□□ -0.74
SCARB1-203ENST00000415380 TGP01266 2768 aa10.41□□□□□ -0.74
SCARB1-203ENST00000415380 ACYP2P14621 99 aa10.4□□□□□ -0.75
SCARB1-203ENST00000415380 LINC00313P59037 77 aa10.39□□□□□ -0.75
SCARB1-203ENST00000415380 A6NN06 94 aa10.39□□□□□ -0.75
SCARB1-203ENST00000415380 KTN1-AS1Q86SY8 53 aa10.38□□□□□ -0.75
SCARB1-203ENST00000415380 DNAH11Q96DT5 4516 aa10.38□□□□□ -0.75
SCARB1-203ENST00000415380 DNAH6Q9C0G6 4158 aa10.38□□□□□ -0.75
SCARB1-203ENST00000415380 RETNLBQ9BQ08 111 aa10.36□□□□□ -0.75
SCARB1-203ENST00000415380 FAM229AH3BQW9 127 aa10.35□□□□□ -0.75
SCARB1-203ENST00000415380 DMAC1Q96GE9 116 aa10.35□□□□□ -0.75
SCARB1-203ENST00000415380 DNAH5Q8TE73 4624 aa10.35□□□□□ -0.75
SCARB1-203ENST00000415380 KRTAP13-2Q52LG2 175 aa10.35□□□□□ -0.75
SCARB1-203ENST00000415380 LY6G6CO95867 125 aa10.34□□□□□ -0.75
SCARB1-203ENST00000415380 KRTAP10-2P60368 255 aa10.34□□□□□ -0.75
SCARB1-203ENST00000415380 IGKV2-30P06310 120 aa10.3□□□□□ -0.76
SCARB1-203ENST00000415380 DNHD1Q96M86 4753 aa10.27□□□□□ -0.76
SCARB1-203ENST00000415380 KRTAP16-1A8MUX0 517 aa10.27□□□□□ -0.77
SCARB1-203ENST00000415380 LRP1BQ9NZR2 4599 aa10.23□□□□□ -0.77
SCARB1-203ENST00000415380 KRTAP10-1P60331 282 aa10.21□□□□□ -0.78
SCARB1-203ENST00000415380 Q6ZSA8 131 aa10.2□□□□□ -0.78
SCARB1-203ENST00000415380 C7orf65Q6ZTY9 151 aa10.2□□□□□ -0.78
SCARB1-203ENST00000415380 KRTAP1-4P0C5Y4 121 aa10.19□□□□□ -0.78
SCARB1-203ENST00000415380 A0A1B0GU69 56 aa10.18□□□□□ -0.78
SCARB1-203ENST00000415380 RBM12B-AS1Q9P1G2 102 aa10.18□□□□□ -0.78
SCARB1-203ENST00000415380 PKD1P98161 4303 aa10.17□□□□□ -0.78
SCARB1-203ENST00000415380 IGKV2D-30A0A075B6S6 120 aa10.16□□□□□ -0.78
SCARB1-203ENST00000415380 FAT2Q9NYQ8 4349 aa10.09□□□□□ -0.79
SCARB1-203ENST00000415380 C4orf48Q5BLP8 95 aa10.08□□□□□ -0.8
SCARB1-203ENST00000415380 VPS13BQ7Z7G8 4022 aa10.07□□□□□ -0.8
SCARB1-203ENST00000415380 PLA2G1BP04054 148 aaKnown RBP10.07□□□□□ -0.8
SCARB1-203ENST00000415380 SPATA8Q6RVD6 105 aa10.06□□□□□ -0.8
SCARB1-203ENST00000415380 TYMSOSQ8TAI1 123 aa10.06□□□□□ -0.8
SCARB1-203ENST00000415380 HYDINQ4G0P3 5121 aa10.05□□□□□ -0.8
SCARB1-203ENST00000415380 SPINK1P00995 79 aa10.03□□□□□ -0.8
SCARB1-203ENST00000415380 UQCR11O14957 56 aa10.01□□□□□ -0.81
SCARB1-203ENST00000415380 MIR22HGQ0VDD5 57 aa10.01□□□□□ -0.81
SCARB1-203ENST00000415380 Q8N1X5 172 aa9.94□□□□□ -0.82
SCARB1-203ENST00000415380 PRAC1Q96KF2 57 aa9.93□□□□□ -0.82
SCARB1-203ENST00000415380 ADM2Q7Z4H4 148 aa9.91□□□□□ -0.82
SCARB1-203ENST00000415380 LINC00304Q8N9R0 145 aa9.91□□□□□ -0.82
SCARB1-203ENST00000415380 RPS29P62273 56 aaKnown RBP9.87□□□□□ -0.83
SCARB1-203ENST00000415380 KRTAP21-3Q3LHN1 58 aa9.84□□□□□ -0.84
SCARB1-203ENST00000415380 SACSQ9NZJ4 4579 aa9.83□□□□□ -0.84
SCARB1-203ENST00000415380 PKHD1P08F94 4074 aa9.8□□□□□ -0.84
SCARB1-203ENST00000415380 C9orf92A6NGG3 77 aa9.78□□□□□ -0.84
SCARB1-203ENST00000415380 A8MUU9 505 aa9.75□□□□□ -0.85
SCARB1-203ENST00000415380 SMR3BP02814 79 aaPredicted RBP9.75□□□□□ -0.85
SCARB1-203ENST00000415380 C20orf166-AS1Q96NR2 134 aa9.75□□□□□ -0.85
SCARB1-203ENST00000415380 KRTAP3-1Q9BYR8 98 aa9.71□□□□□ -0.86
SCARB1-203ENST00000415380 DYNC1H1Q14204 4646 aaKnown RBP9.68□□□□□ -0.86
SCARB1-203ENST00000415380 PKHD1L1Q86WI1 4243 aa9.68□□□□□ -0.86
SCARB1-203ENST00000415380 H0YAA0 97 aa9.66□□□□□ -0.86
SCARB1-203ENST00000415380 LINC01554Q52M75 96 aa9.64□□□□□ -0.87
SCARB1-203ENST00000415380 APOBP04114 4563 aaKnown RBP9.63□□□□□ -0.87
SCARB1-203ENST00000415380 CSAG1Q6PB30 78 aa9.62□□□□□ -0.87
SCARB1-203ENST00000415380 FAT1Q14517 4588 aa9.62□□□□□ -0.87
SCARB1-203ENST00000415380 KRTAP10-4P60372 401 aaPredicted RBP9.62□□□□□ -0.87
SCARB1-203ENST00000415380 A0A1B0GU33 70 aa9.59□□□□□ -0.87
SCARB1-203ENST00000415380 H1FX-AS1Q4G0G2 97 aa9.55□□□□□ -0.88
SCARB1-203ENST00000415380 A0A1B0GVY2 172 aa9.53□□□□□ -0.88
SCARB1-203ENST00000415380 COX6B2Q6YFQ2 88 aa9.5□□□□□ -0.89
SCARB1-203ENST00000415380 FLG2Q5D862 2391 aaPredicted RBP9.39□□□□□ -0.91
SCARB1-203ENST00000415380 FAT3Q8TDW7 4589 aa9.36□□□□□ -0.91
SCARB1-203ENST00000415380 KRTAP25-1Q3LHN0 102 aa9.34□□□□□ -0.91
SCARB1-203ENST00000415380 K7ERS5 55 aa9.29□□□□□ -0.92
SCARB1-203ENST00000415380 KRTAP3-3Q9BYR6 98 aa9.29□□□□□ -0.92
SCARB1-203ENST00000415380 RYR2Q92736 4967 aa9.29□□□□□ -0.92
SCARB1-203ENST00000415380 TNXBP22105 4242 aa9.28□□□□□ -0.92
SCARB1-203ENST00000415380 LRP1Q07954 4544 aaKnown RBP9.27□□□□□ -0.93
SCARB1-203ENST00000415380 KRTAP10-6P60371 365 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms