RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 MEGF8Q7Z7M0 2845 aa2.76□□□□□ -1.97
HERC4-205ENST00000412272 RPL37P61927 97 aaKnown RBP2.76□□□□□ -1.97
HERC4-205ENST00000412272 OTOGLQ3ZCN5 2332 aa2.75□□□□□ -1.97
HERC4-205ENST00000412272 KRTAP1-1Q07627 177 aa2.75□□□□□ -1.97
HERC4-205ENST00000412272 ZNF462Q96JM2 2506 aa2.75□□□□□ -1.97
HERC4-205ENST00000412272 USP9XQ93008 2570 aaPredicted RBP2.75□□□□□ -1.97
HERC4-205ENST00000412272 KRTAP10-8P60410 259 aa2.75□□□□□ -1.97
HERC4-205ENST00000412272 Q8N1X5 172 aa2.75□□□□□ -1.97
HERC4-205ENST00000412272 UTP20O75691 2785 aaKnown RBP2.74□□□□□ -1.97
HERC4-205ENST00000412272 NBEAL2Q6ZNJ1 2754 aa2.74□□□□□ -1.97
HERC4-205ENST00000412272 MAST4O15021 2626 aa2.74□□□□□ -1.97
HERC4-205ENST00000412272 PTPN13Q12923 2485 aa2.74□□□□□ -1.97
HERC4-205ENST00000412272 CSPG4Q6UVK1 2322 aa2.74□□□□□ -1.97
HERC4-205ENST00000412272 ACACBO00763 2458 aa2.73□□□□□ -1.97
HERC4-205ENST00000412272 PRKDCP78527 4128 aaKnown RBP2.73□□□□□ -1.97
HERC4-205ENST00000412272 PLAC4Q8WY50 150 aa2.73□□□□□ -1.97
HERC4-205ENST00000412272 JMJD1CQ15652 2540 aa2.72□□□□□ -1.97
HERC4-205ENST00000412272 XP32Q5T750 250 aa2.72□□□□□ -1.97
HERC4-205ENST00000412272 CCDC168Q8NDH2 2452 aa2.72□□□□□ -1.97
HERC4-205ENST00000412272 HIVEP2P31629 2446 aa2.72□□□□□ -1.97
HERC4-205ENST00000412272 DNAH8Q96JB1 4490 aa2.72□□□□□ -1.97
HERC4-205ENST00000412272 HIVEP3Q5T1R4 2406 aa2.71□□□□□ -1.97
HERC4-205ENST00000412272 DNAH7Q8WXX0 4024 aa2.71□□□□□ -1.97
HERC4-205ENST00000412272 MXRA5Q9NR99 2828 aa2.71□□□□□ -1.98
HERC4-205ENST00000412272 NIPBLQ6KC79 2804 aaeCLIP2.71□□□□□ -1.985e-6■■■■■ 32.2
HERC4-205ENST00000412272 TLN2Q9Y4G6 2542 aa2.71□□□□□ -1.98
HERC4-205ENST00000412272 MYO18BQ8IUG5 2567 aa2.71□□□□□ -1.98
HERC4-205ENST00000412272 FN1P02751 2386 aaKnown RBP2.71□□□□□ -1.98
HERC4-205ENST00000412272 FAM208BQ5VWN6 2430 aa2.71□□□□□ -1.98
HERC4-205ENST00000412272 DYNC2H1Q8NCM8 4307 aaKnown RBP2.71□□□□□ -1.98
HERC4-205ENST00000412272 KMT2CQ8NEZ4 4911 aaKnown RBP2.7□□□□□ -1.98
HERC4-205ENST00000412272 HECTD1Q9ULT8 2610 aa2.7□□□□□ -1.98
HERC4-205ENST00000412272 R4GN34 69 aa2.7□□□□□ -1.98
HERC4-205ENST00000412272 ABCA12Q86UK0 2595 aa2.7□□□□□ -1.98
HERC4-205ENST00000412272 HECTD4Q9Y4D8 3996 aa2.69□□□□□ -1.98
HERC4-205ENST00000412272 SONP18583 2426 aaKnown RBP2.69□□□□□ -1.98
HERC4-205ENST00000412272 KRTAP13-4Q3LI77 160 aa2.69□□□□□ -1.98
HERC4-205ENST00000412272 Q6ZRN7 208 aaPredicted RBP2.69□□□□□ -1.98
HERC4-205ENST00000412272 PDZD2O15018 2839 aa2.68□□□□□ -1.98
HERC4-205ENST00000412272 GCN1Q92616 2671 aaKnown RBP2.68□□□□□ -1.98
HERC4-205ENST00000412272 ZFYVE26Q68DK2 2539 aa2.67□□□□□ -1.98
HERC4-205ENST00000412272 DNAH17Q9UFH2 4485 aa2.67□□□□□ -1.98
HERC4-205ENST00000412272 SPINK6Q6UWN8 80 aa2.67□□□□□ -1.98
HERC4-205ENST00000412272 KRTAP1-5Q9BYS1 174 aa2.67□□□□□ -1.98
HERC4-205ENST00000412272 DNAH6Q9C0G6 4158 aa2.67□□□□□ -1.98
HERC4-205ENST00000412272 KRTAP23-1A1A580 65 aa2.66□□□□□ -1.98
HERC4-205ENST00000412272 KRTAP10-9P60411 292 aa2.66□□□□□ -1.98
HERC4-205ENST00000412272 KRTAP3-1Q9BYR8 98 aa2.66□□□□□ -1.98
HERC4-205ENST00000412272 DNAH10Q8IVF4 4471 aa2.66□□□□□ -1.98
HERC4-205ENST00000412272 CEP295Q9C0D2 2601 aa2.66□□□□□ -1.98
HERC4-205ENST00000412272 NOTCH2Q04721 2471 aa2.66□□□□□ -1.98
HERC4-205ENST00000412272 DNAH9Q9NYC9 4486 aa2.65□□□□□ -1.99
HERC4-205ENST00000412272 S4R3F8 94 aa2.65□□□□□ -1.99
HERC4-205ENST00000412272 ZNF292O60281 2723 aa2.65□□□□□ -1.99
HERC4-205ENST00000412272 DOPEY1Q5JWR5 2465 aa2.64□□□□□ -1.99
HERC4-205ENST00000412272 A0A0D9SG42 100 aa2.63□□□□□ -1.99
HERC4-205ENST00000412272 KRTAP10-6P60371 365 aaPredicted RBP2.63□□□□□ -1.99
HERC4-205ENST00000412272 MTORP42345 2549 aa2.63□□□□□ -1.99
HERC4-205ENST00000412272 KRTAP10-11P60412 298 aa2.63□□□□□ -1.99
HERC4-205ENST00000412272 KRTAP12-2P59991 146 aa2.63□□□□□ -1.99
HERC4-205ENST00000412272 FBN2P35556 2912 aa2.62□□□□□ -1.99
HERC4-205ENST00000412272 HYDINQ4G0P3 5121 aa2.62□□□□□ -1.99
HERC4-205ENST00000412272 RPS29P62273 56 aaKnown RBP2.62□□□□□ -1.99
HERC4-205ENST00000412272 COL7A1Q02388 2944 aa2.62□□□□□ -1.99
HERC4-205ENST00000412272 NBEAL1Q6ZS30 2694 aa2.61□□□□□ -1.99
HERC4-205ENST00000412272 APLNQ9ULZ1 77 aa2.61□□□□□ -1.99
HERC4-205ENST00000412272 RYR2Q92736 4967 aa2.6□□□□□ -1.99
HERC4-205ENST00000412272 CFAP46Q8IYW2 2715 aa2.6□□□□□ -1.99
HERC4-205ENST00000412272 HIVEP1P15822 2718 aa2.6□□□□□ -1.99
HERC4-205ENST00000412272 TEP1Q99973 2627 aaKnown RBP2.59□□□□□ -1.99
HERC4-205ENST00000412272 CENPEQ02224 2701 aa2.59□□□□□ -1.99
HERC4-205ENST00000412272 ITPR3Q14573 2671 aa2.59□□□□□ -1.99
HERC4-205ENST00000412272 KRTAP13-2Q52LG2 175 aa2.59□□□□□ -1.99
HERC4-205ENST00000412272 COL6A5A8TX70 2615 aa2.58□□□□□ -2
HERC4-205ENST00000412272 DMBT1Q9UGM3 2413 aaPredicted RBP2.58□□□□□ -2
HERC4-205ENST00000412272 INE1O15225 51 aa2.58□□□□□ -2
HERC4-205ENST00000412272 HUWE1Q7Z6Z7 4374 aaKnown RBP2.58□□□□□ -2
HERC4-205ENST00000412272 MYO9AB2RTY4 2548 aa2.57□□□□□ -2
HERC4-205ENST00000412272 ZANQ9Y493 2812 aa2.57□□□□□ -2
HERC4-205ENST00000412272 PCLOQ9Y6V0 5065 aa2.57□□□□□ -2
HERC4-205ENST00000412272 KRTAP12-1P59990 96 aa2.57□□□□□ -2
HERC4-205ENST00000412272 UBE2DNLQ8IWF7 75 aa2.57□□□□□ -2
HERC4-205ENST00000412272 DNAH11Q96DT5 4516 aa2.57□□□□□ -2
HERC4-205ENST00000412272 SETD2Q9BYW2 2564 aaPredicted RBP2.57□□□□□ -2
HERC4-205ENST00000412272 HELZ2Q9BYK8 2649 aaKnown RBP2.56□□□□□ -2
HERC4-205ENST00000412272 EPPK1P58107 5090 aaKnown RBP2.56□□□□□ -2
HERC4-205ENST00000412272 PKD1L1Q8TDX9 2849 aa2.56□□□□□ -2
HERC4-205ENST00000412272 MYCBP2O75592 4640 aa2.55□□□□□ -2
HERC4-205ENST00000412272 DNAH2Q9P225 4427 aa2.54□□□□□ -2
HERC4-205ENST00000412272 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
HERC4-205ENST00000412272 USP9YO00507 2555 aaPredicted RBP2.53□□□□□ -2
HERC4-205ENST00000412272 KRTAP1-4P0C5Y4 121 aa2.53□□□□□ -2
HERC4-205ENST00000412272 KMT2AQ03164 3969 aa2.53□□□□□ -2
HERC4-205ENST00000412272 TGP01266 2768 aa2.53□□□□□ -2
HERC4-205ENST00000412272 SACSQ9NZJ4 4579 aa2.53□□□□□ -2
HERC4-205ENST00000412272 FAT2Q9NYQ8 4349 aa2.52□□□□□ -2.01
HERC4-205ENST00000412272 FAT3Q8TDW7 4589 aa2.5□□□□□ -2.01
HERC4-205ENST00000412272 USP24Q9UPU5 2620 aa2.5□□□□□ -2.01
HERC4-205ENST00000412272 PKHD1P08F94 4074 aa2.5□□□□□ -2.01
HERC4-205ENST00000412272 ITPR2Q14571 2701 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms