RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 COL6A3P12111 3177 aa3.91□□□□□ -1.78
PTPN3-203ENST00000412145 XP32Q5T750 250 aa3.9□□□□□ -1.78
PTPN3-203ENST00000412145 KRTAP7-1Q8IUC3 87 aa3.9□□□□□ -1.79
PTPN3-203ENST00000412145 VCANP13611 3396 aa3.9□□□□□ -1.79
PTPN3-203ENST00000412145 DSPP15924 2871 aaKnown RBP3.89□□□□□ -1.79
PTPN3-203ENST00000412145 VPS13AQ96RL7 3174 aa3.89□□□□□ -1.79
PTPN3-203ENST00000412145 UBR5O95071 2799 aaPredicted RBP3.89□□□□□ -1.79
PTPN3-203ENST00000412145 NBEAL2Q6ZNJ1 2754 aa3.87□□□□□ -1.79
PTPN3-203ENST00000412145 NIPBLQ6KC79 2804 aaeCLIP3.87□□□□□ -1.79
PTPN3-203ENST00000412145 REV3LO60673 3130 aa3.87□□□□□ -1.79
PTPN3-203ENST00000412145 EYSQ5T1H1 3165 aa3.86□□□□□ -1.79
PTPN3-203ENST00000412145 MYO15AQ9UKN7 3530 aa3.85□□□□□ -1.79
PTPN3-203ENST00000412145 FREM2Q5SZK8 3169 aa3.85□□□□□ -1.79
PTPN3-203ENST00000412145 CRYBG3Q68DQ2 2970 aa3.84□□□□□ -1.79
PTPN3-203ENST00000412145 INE1O15225 51 aa3.84□□□□□ -1.8
PTPN3-203ENST00000412145 USP34Q70CQ2 3546 aa3.83□□□□□ -1.8
PTPN3-203ENST00000412145 KRTAP13-4Q3LI77 160 aa3.82□□□□□ -1.8
PTPN3-203ENST00000412145 LAMA1P25391 3075 aa3.81□□□□□ -1.8
PTPN3-203ENST00000412145 TACC2O95359 2948 aa3.81□□□□□ -1.8
PTPN3-203ENST00000412145 COL12A1Q99715 3063 aa3.8□□□□□ -1.8
PTPN3-203ENST00000412145 KRTAP1-4P0C5Y4 121 aa3.8□□□□□ -1.8
PTPN3-203ENST00000412145 LRBAP50851 2863 aa3.8□□□□□ -1.8
PTPN3-203ENST00000412145 CFAP47Q6ZTR5 3102 aa3.79□□□□□ -1.8
PTPN3-203ENST00000412145 KRTAP10-10P60014 251 aa3.79□□□□□ -1.8
PTPN3-203ENST00000412145 FRYLO94915 3013 aa3.78□□□□□ -1.8
PTPN3-203ENST00000412145 ATMQ13315 3056 aa3.78□□□□□ -1.8
PTPN3-203ENST00000412145 SPEGQ15772 3267 aa3.78□□□□□ -1.8
PTPN3-203ENST00000412145 WDFY3Q8IZQ1 3526 aa3.78□□□□□ -1.81
PTPN3-203ENST00000412145 DMXL2Q8TDJ6 3036 aa3.77□□□□□ -1.81
PTPN3-203ENST00000412145 FLNCQ14315 2725 aa3.76□□□□□ -1.81
PTPN3-203ENST00000412145 KRTAP13-3Q3SY46 172 aa3.76□□□□□ -1.81
PTPN3-203ENST00000412145 TENM3Q9P273 2699 aa3.75□□□□□ -1.81
PTPN3-203ENST00000412145 BOD1L1Q8NFC6 3051 aa3.75□□□□□ -1.81
PTPN3-203ENST00000412145 KALRNO60229 2985 aa3.73□□□□□ -1.81
PTPN3-203ENST00000412145 A0A1B0GVY2 172 aa3.72□□□□□ -1.81
PTPN3-203ENST00000412145 ADGRG4Q8IZF6 3080 aa3.72□□□□□ -1.81
PTPN3-203ENST00000412145 HIVEP1P15822 2718 aa3.72□□□□□ -1.81
PTPN3-203ENST00000412145 TNRC18O15417 2968 aaPredicted RBP3.72□□□□□ -1.81
PTPN3-203ENST00000412145 TENM4Q6N022 2769 aa3.71□□□□□ -1.81
PTPN3-203ENST00000412145 DMDP11532 3685 aa3.7□□□□□ -1.82
PTPN3-203ENST00000412145 KRTAP12-2P59991 146 aa3.68□□□□□ -1.82
PTPN3-203ENST00000412145 NF1P21359 2839 aa3.67□□□□□ -1.82
PTPN3-203ENST00000412145 TGP01266 2768 aa3.65□□□□□ -1.82
PTPN3-203ENST00000412145 ASPMQ8IZT6 3477 aa3.65□□□□□ -1.83
PTPN3-203ENST00000412145 TENM1Q9UKZ4 2725 aa3.64□□□□□ -1.83
PTPN3-203ENST00000412145 PDZD2O15018 2839 aa3.64□□□□□ -1.83
PTPN3-203ENST00000412145 DMXL1Q9Y485 3027 aa3.63□□□□□ -1.83
PTPN3-203ENST00000412145 LAMA5O15230 3695 aa3.63□□□□□ -1.83
PTPN3-203ENST00000412145 CELSR2Q9HCU4 2923 aa3.62□□□□□ -1.83
PTPN3-203ENST00000412145 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
PTPN3-203ENST00000412145 KRTAP23-1A1A580 65 aa3.6□□□□□ -1.83
PTPN3-203ENST00000412145 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
PTPN3-203ENST00000412145 ASH1LQ9NR48 2969 aaKnown RBP3.6□□□□□ -1.83
PTPN3-203ENST00000412145 ZZEF1O43149 2961 aa3.59□□□□□ -1.83
PTPN3-203ENST00000412145 NBEAQ8NFP9 2946 aa3.59□□□□□ -1.83
PTPN3-203ENST00000412145 LOC400499M0QZD8 3231 aa3.57□□□□□ -1.84
PTPN3-203ENST00000412145 TENM2Q9NT68 2774 aa3.55□□□□□ -1.84
PTPN3-203ENST00000412145 DCHS2Q6V1P9 2916 aa3.53□□□□□ -1.84
PTPN3-203ENST00000412145 MUC3AQ02505 3323 aa3.52□□□□□ -1.85
PTPN3-203ENST00000412145 ZANQ9Y493 2812 aa3.52□□□□□ -1.85
PTPN3-203ENST00000412145 ZFHX4Q86UP3 3567 aa3.51□□□□□ -1.85
PTPN3-203ENST00000412145 SRRM2Q9UQ35 2752 aaKnown RBP3.51□□□□□ -1.85
PTPN3-203ENST00000412145 NBPF19A0A087WUL8 3843 aa3.5□□□□□ -1.85
PTPN3-203ENST00000412145 SPENQ96T58 3664 aaKnown RBP3.47□□□□□ -1.85
PTPN3-203ENST00000412145 CELSR1Q9NYQ6 3014 aa3.47□□□□□ -1.85
PTPN3-203ENST00000412145 MXRA5Q9NR99 2828 aa3.45□□□□□ -1.86
PTPN3-203ENST00000412145 DCHS1Q96JQ0 3298 aa3.44□□□□□ -1.86
PTPN3-203ENST00000412145 RELNP78509 3460 aa3.43□□□□□ -1.86
PTPN3-203ENST00000412145 SMG1Q96Q15 3661 aaKnown RBP3.42□□□□□ -1.86
PTPN3-203ENST00000412145 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
PTPN3-203ENST00000412145 FBN2P35556 2912 aa3.41□□□□□ -1.86
PTPN3-203ENST00000412145 ZFHX3Q15911 3703 aa3.39□□□□□ -1.87
PTPN3-203ENST00000412145 KRTAP10-6P60371 365 aaPredicted RBP3.39□□□□□ -1.87
PTPN3-203ENST00000412145 HRNRQ86YZ3 2850 aaPredicted RBP3.38□□□□□ -1.87
PTPN3-203ENST00000412145 VWFP04275 2813 aa3.36□□□□□ -1.87
PTPN3-203ENST00000412145 KRTAP3-1Q9BYR8 98 aa3.36□□□□□ -1.87
PTPN3-203ENST00000412145 PKD1L1Q8TDX9 2849 aa3.34□□□□□ -1.87
PTPN3-203ENST00000412145 CSMD1Q96PZ7 3565 aa3.32□□□□□ -1.88
PTPN3-203ENST00000412145 SVEP1Q4LDE5 3571 aa3.31□□□□□ -1.88
PTPN3-203ENST00000412145 ANK3Q12955 4377 aaKnown RBP3.31□□□□□ -1.88
PTPN3-203ENST00000412145 KRTAP12-3P60328 96 aa3.31□□□□□ -1.88
PTPN3-203ENST00000412145 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
PTPN3-203ENST00000412145 VPS13CQ709C8 3753 aa3.28□□□□□ -1.88
PTPN3-203ENST00000412145 COL7A1Q02388 2944 aa3.27□□□□□ -1.89
PTPN3-203ENST00000412145 KRTAP4-5Q9BYR2 181 aa3.27□□□□□ -1.89
PTPN3-203ENST00000412145 CUBNO60494 3623 aa3.26□□□□□ -1.89
PTPN3-203ENST00000412145 CSMD2Q7Z408 3487 aa3.26□□□□□ -1.89
PTPN3-203ENST00000412145 BSNQ9UPA5 3926 aa3.24□□□□□ -1.89
PTPN3-203ENST00000412145 MT1HL1P0DM35 61 aa3.24□□□□□ -1.89
PTPN3-203ENST00000412145 FBN1P35555 2871 aaKnown RBP3.24□□□□□ -1.89
PTPN3-203ENST00000412145 KRTAP3-2Q9BYR7 98 aa3.21□□□□□ -1.9
PTPN3-203ENST00000412145 MEGF8Q7Z7M0 2845 aa3.21□□□□□ -1.9
PTPN3-203ENST00000412145 OTOGQ6ZRI0 2925 aa3.18□□□□□ -1.9
PTPN3-203ENST00000412145 KRTAP3-3Q9BYR6 98 aa3.15□□□□□ -1.9
PTPN3-203ENST00000412145 HUWE1Q7Z6Z7 4374 aaKnown RBP3.13□□□□□ -1.91
PTPN3-203ENST00000412145 FBN3Q75N90 2809 aa3.12□□□□□ -1.91
PTPN3-203ENST00000412145 ALMS1Q8TCU4 4167 aa3.12□□□□□ -1.91
PTPN3-203ENST00000412145 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
PTPN3-203ENST00000412145 CRCT1Q9UGL9 99 aa3.1□□□□□ -1.91
PTPN3-203ENST00000412145 KRTAP10-5P60370 271 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms