RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 NBEAQ8NFP9 2946 aa5.13□□□□□ -1.59
PBRM1-208ENST00000410007 CELSR2Q9HCU4 2923 aa5.13□□□□□ -1.59
PBRM1-208ENST00000410007 ADM2Q7Z4H4 148 aa5.13□□□□□ -1.59
PBRM1-208ENST00000410007 VCANP13611 3396 aa5.12□□□□□ -1.59
PBRM1-208ENST00000410007 ASH1LQ9NR48 2969 aaKnown RBP5.11□□□□□ -1.59
PBRM1-208ENST00000410007 PLAC4Q8WY50 150 aa5.1□□□□□ -1.59
PBRM1-208ENST00000410007 ZANQ9Y493 2812 aa5.1□□□□□ -1.59
PBRM1-208ENST00000410007 CRYBG3Q68DQ2 2970 aa5.1□□□□□ -1.59
PBRM1-208ENST00000410007 FREM2Q5SZK8 3169 aa5.1□□□□□ -1.59
PBRM1-208ENST00000410007 USP34Q70CQ2 3546 aa5.09□□□□□ -1.59
PBRM1-208ENST00000410007 ROMO1P60602 79 aa5.09□□□□□ -1.59
PBRM1-208ENST00000410007 DCHS2Q6V1P9 2916 aa5.08□□□□□ -1.6
PBRM1-208ENST00000410007 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
PBRM1-208ENST00000410007 SPATA8Q6RVD6 105 aa5.05□□□□□ -1.6
PBRM1-208ENST00000410007 DMXL1Q9Y485 3027 aa5.03□□□□□ -1.6
PBRM1-208ENST00000410007 A8MUU9 505 aa5.02□□□□□ -1.61
PBRM1-208ENST00000410007 C20orf166-AS1Q96NR2 134 aa5□□□□□ -1.61
PBRM1-208ENST00000410007 DNAH14Q0VDD8 3507 aa4.99□□□□□ -1.61
PBRM1-208ENST00000410007 NF1P21359 2839 aa4.98□□□□□ -1.61
PBRM1-208ENST00000410007 HRNRQ86YZ3 2850 aaPredicted RBP4.98□□□□□ -1.61
PBRM1-208ENST00000410007 KRTAP1-4P0C5Y4 121 aa4.98□□□□□ -1.61
PBRM1-208ENST00000410007 TENM3Q9P273 2699 aa4.98□□□□□ -1.61
PBRM1-208ENST00000410007 SPEGQ15772 3267 aa4.96□□□□□ -1.62
PBRM1-208ENST00000410007 CFAP47Q6ZTR5 3102 aa4.95□□□□□ -1.62
PBRM1-208ENST00000410007 TENM1Q9UKZ4 2725 aa4.93□□□□□ -1.62
PBRM1-208ENST00000410007 FBN2P35556 2912 aa4.92□□□□□ -1.62
PBRM1-208ENST00000410007 XP32Q5T750 250 aa4.91□□□□□ -1.62
PBRM1-208ENST00000410007 A8MU10 97 aa4.9□□□□□ -1.62
PBRM1-208ENST00000410007 MXRA5Q9NR99 2828 aa4.9□□□□□ -1.63
PBRM1-208ENST00000410007 A0A0A0MQY5 61 aa4.89□□□□□ -1.63
PBRM1-208ENST00000410007 TENM2Q9NT68 2774 aa4.88□□□□□ -1.63
PBRM1-208ENST00000410007 SPTBN5Q9NRC6 3674 aaKnown RBP4.88□□□□□ -1.63
PBRM1-208ENST00000410007 TPRXLQ17RH7 258 aa4.87□□□□□ -1.63
PBRM1-208ENST00000410007 MYO15AQ9UKN7 3530 aa4.87□□□□□ -1.63
PBRM1-208ENST00000410007 LOC400499M0QZD8 3231 aa4.82□□□□□ -1.64
PBRM1-208ENST00000410007 A6NN06 94 aa4.81□□□□□ -1.64
PBRM1-208ENST00000410007 TNP1P09430 55 aa4.81□□□□□ -1.64
PBRM1-208ENST00000410007 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
PBRM1-208ENST00000410007 CELSR1Q9NYQ6 3014 aa4.79□□□□□ -1.64
PBRM1-208ENST00000410007 A0A1B0GVY2 172 aa4.78□□□□□ -1.64
PBRM1-208ENST00000410007 KRTAP16-1A8MUX0 517 aa4.78□□□□□ -1.64
PBRM1-208ENST00000410007 KRTAP13-3Q3SY46 172 aa4.77□□□□□ -1.65
PBRM1-208ENST00000410007 PKD1L1Q8TDX9 2849 aa4.77□□□□□ -1.65
PBRM1-208ENST00000410007 KRTAP10-8P60410 259 aa4.74□□□□□ -1.65
PBRM1-208ENST00000410007 PDZD2O15018 2839 aa4.72□□□□□ -1.65
PBRM1-208ENST00000410007 DCHS1Q96JQ0 3298 aa4.7□□□□□ -1.66
PBRM1-208ENST00000410007 H3BS24 57 aa4.69□□□□□ -1.66
PBRM1-208ENST00000410007 TGP01266 2768 aa4.69□□□□□ -1.66
PBRM1-208ENST00000410007 KRTAP10-10P60014 251 aa4.67□□□□□ -1.66
PBRM1-208ENST00000410007 PP632Q6XCG6 107 aa4.67□□□□□ -1.66
PBRM1-208ENST00000410007 WDFY3Q8IZQ1 3526 aa4.66□□□□□ -1.66
PBRM1-208ENST00000410007 VWFP04275 2813 aa4.65□□□□□ -1.66
PBRM1-208ENST00000410007 OTOGQ6ZRI0 2925 aa4.62□□□□□ -1.67
PBRM1-208ENST00000410007 H0YAA0 97 aa4.61□□□□□ -1.67
PBRM1-208ENST00000410007 RELNP78509 3460 aa4.61□□□□□ -1.67
PBRM1-208ENST00000410007 PRO2289Q9P1D8 64 aa4.6□□□□□ -1.67
PBRM1-208ENST00000410007 P0C880 135 aa4.58□□□□□ -1.68
PBRM1-208ENST00000410007 C10orf95Q9H7T3 257 aa4.57□□□□□ -1.68
PBRM1-208ENST00000410007 FBN1P35555 2871 aaKnown RBP4.57□□□□□ -1.68
PBRM1-208ENST00000410007 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
PBRM1-208ENST00000410007 ASPMQ8IZT6 3477 aa4.52□□□□□ -1.69
PBRM1-208ENST00000410007 SRRM2Q9UQ35 2752 aaKnown RBP4.49□□□□□ -1.69
PBRM1-208ENST00000410007 MUC3AQ02505 3323 aa4.47□□□□□ -1.69
PBRM1-208ENST00000410007 NBPF19A0A087WUL8 3843 aa4.47□□□□□ -1.69
PBRM1-208ENST00000410007 LAMA5O15230 3695 aa4.46□□□□□ -1.7
PBRM1-208ENST00000410007 ZFHX3Q15911 3703 aa4.46□□□□□ -1.7
PBRM1-208ENST00000410007 ZFHX4Q86UP3 3567 aa4.42□□□□□ -1.7
PBRM1-208ENST00000410007 DMDP11532 3685 aa4.4□□□□□ -1.7
PBRM1-208ENST00000410007 FBN3Q75N90 2809 aa4.4□□□□□ -1.71
PBRM1-208ENST00000410007 ANK3Q12955 4377 aaKnown RBP4.38□□□□□ -1.71
PBRM1-208ENST00000410007 KRTAP3-1Q9BYR8 98 aa4.37□□□□□ -1.71
PBRM1-208ENST00000410007 MT1HL1P0DM35 61 aa4.35□□□□□ -1.71
PBRM1-208ENST00000410007 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
PBRM1-208ENST00000410007 MEGF8Q7Z7M0 2845 aa4.33□□□□□ -1.72
PBRM1-208ENST00000410007 KRTAP13-4Q3LI77 160 aa4.33□□□□□ -1.72
PBRM1-208ENST00000410007 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
PBRM1-208ENST00000410007 COL7A1Q02388 2944 aa4.29□□□□□ -1.72
PBRM1-208ENST00000410007 SMG1Q96Q15 3661 aaKnown RBP4.29□□□□□ -1.72
PBRM1-208ENST00000410007 CSMD1Q96PZ7 3565 aa4.26□□□□□ -1.73
PBRM1-208ENST00000410007 KRTAP10-4P60372 401 aaPredicted RBP4.25□□□□□ -1.73
PBRM1-208ENST00000410007 CUBNO60494 3623 aa4.25□□□□□ -1.73
PBRM1-208ENST00000410007 SPENQ96T58 3664 aaKnown RBP4.25□□□□□ -1.73
PBRM1-208ENST00000410007 CSMD2Q7Z408 3487 aa4.24□□□□□ -1.73
PBRM1-208ENST00000410007 KRTAP10-6P60371 365 aaPredicted RBP4.23□□□□□ -1.73
PBRM1-208ENST00000410007 TRRAPQ9Y4A5 3859 aa4.22□□□□□ -1.73
PBRM1-208ENST00000410007 SVEP1Q4LDE5 3571 aa4.22□□□□□ -1.73
PBRM1-208ENST00000410007 KRTAP4-5Q9BYR2 181 aa4.2□□□□□ -1.74
PBRM1-208ENST00000410007 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
PBRM1-208ENST00000410007 KRTAP3-3Q9BYR6 98 aa4.11□□□□□ -1.75
PBRM1-208ENST00000410007 HUWE1Q7Z6Z7 4374 aaKnown RBP4.11□□□□□ -1.75
PBRM1-208ENST00000410007 KRTAP3-2Q9BYR7 98 aa4.09□□□□□ -1.75
PBRM1-208ENST00000410007 ALMS1Q8TCU4 4167 aa4.03□□□□□ -1.76
PBRM1-208ENST00000410007 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
PBRM1-208ENST00000410007 BSNQ9UPA5 3926 aa4.01□□□□□ -1.77
PBRM1-208ENST00000410007 DNAH5Q8TE73 4624 aa3.94□□□□□ -1.78
PBRM1-208ENST00000410007 DNAH9Q9NYC9 4486 aa3.94□□□□□ -1.78
PBRM1-208ENST00000410007 KRTAP23-1A1A580 65 aa3.9□□□□□ -1.79
PBRM1-208ENST00000410007 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
PBRM1-208ENST00000410007 PLECQ15149 4684 aaKnown RBP3.88□□□□□ -1.79
PBRM1-208ENST00000410007 DNHD1Q96M86 4753 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms