RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 ANKHD1Q8IWZ3 2542 aaKnown RBP2.12□□□□□ -2.07
RGPD1-202ENST00000409776 MYCBP2O75592 4640 aa2.11□□□□□ -2.07
RGPD1-202ENST00000409776 ACACBO00763 2458 aa2.11□□□□□ -2.07
RGPD1-202ENST00000409776 ZFYVE26Q68DK2 2539 aa2.11□□□□□ -2.07
RGPD1-202ENST00000409776 KRTAP10-9P60411 292 aa2.1□□□□□ -2.07
RGPD1-202ENST00000409776 DYNC2H1Q8NCM8 4307 aaKnown RBP2.1□□□□□ -2.07
RGPD1-202ENST00000409776 MTORP42345 2549 aa2.1□□□□□ -2.07
RGPD1-202ENST00000409776 DMBT1Q9UGM3 2413 aaPredicted RBP2.1□□□□□ -2.07
RGPD1-202ENST00000409776 KRTAP10-11P60412 298 aa2.09□□□□□ -2.07
RGPD1-202ENST00000409776 XP32Q5T750 250 aa2.09□□□□□ -2.07
RGPD1-202ENST00000409776 CACNA1AO00555 2505 aa2.09□□□□□ -2.07
RGPD1-202ENST00000409776 PTPN13Q12923 2485 aa2.09□□□□□ -2.07
RGPD1-202ENST00000409776 CCDC168Q8NDH2 2452 aa2.08□□□□□ -2.08
RGPD1-202ENST00000409776 KRTAP10-6P60371 365 aaPredicted RBP2.08□□□□□ -2.08
RGPD1-202ENST00000409776 EPG5Q9HCE0 2579 aa2.08□□□□□ -2.08
RGPD1-202ENST00000409776 NBEAQ8NFP9 2946 aa2.07□□□□□ -2.08
RGPD1-202ENST00000409776 RPS29P62273 56 aaKnown RBP2.07□□□□□ -2.08
RGPD1-202ENST00000409776 ITPR1Q14643 2758 aa2.06□□□□□ -2.08
RGPD1-202ENST00000409776 A0A1B0GVY2 172 aa2.06□□□□□ -2.08
RGPD1-202ENST00000409776 HSPG2P98160 4391 aa2.05□□□□□ -2.08
RGPD1-202ENST00000409776 KRTAP9-9Q9BYP9 154 aa2.05□□□□□ -2.08
RGPD1-202ENST00000409776 KRTAP9-4Q9BYQ2 154 aa2.05□□□□□ -2.08
RGPD1-202ENST00000409776 BDP1A6H8Y1 2624 aa2.05□□□□□ -2.08
RGPD1-202ENST00000409776 LRRK2Q5S007 2527 aa2.05□□□□□ -2.08
RGPD1-202ENST00000409776 COL27A1Q8IZC6 1860 aaPredicted RBP2.05□□□□□ -2.08
RGPD1-202ENST00000409776 DNAH9Q9NYC9 4486 aa2.04□□□□□ -2.08
RGPD1-202ENST00000409776 TLN2Q9Y4G6 2542 aa2.04□□□□□ -2.08
RGPD1-202ENST00000409776 ADGRG4Q8IZF6 3080 aa2.04□□□□□ -2.08
RGPD1-202ENST00000409776 KALRNO60229 2985 aa2.04□□□□□ -2.08
RGPD1-202ENST00000409776 KRTAP12-1P59990 96 aa2.04□□□□□ -2.08
RGPD1-202ENST00000409776 DNAH2Q9P225 4427 aa2.03□□□□□ -2.08
RGPD1-202ENST00000409776 ZNF292O60281 2723 aa2.03□□□□□ -2.08
RGPD1-202ENST00000409776 KRTAP10-10P60014 251 aa2.03□□□□□ -2.09
RGPD1-202ENST00000409776 MGAQ8IWI9 3026 aa2.02□□□□□ -2.09
RGPD1-202ENST00000409776 HUWE1Q7Z6Z7 4374 aaKnown RBP2.02□□□□□ -2.09
RGPD1-202ENST00000409776 COL12A1Q99715 3063 aa2.02□□□□□ -2.09
RGPD1-202ENST00000409776 ZFHX2Q9C0A1 2572 aaPredicted RBP2.02□□□□□ -2.09
RGPD1-202ENST00000409776 DNAH10Q8IVF4 4471 aa2.01□□□□□ -2.09
RGPD1-202ENST00000409776 KRTAP19-4Q3LI73 84 aa2.01□□□□□ -2.09
RGPD1-202ENST00000409776 JMJD1CQ15652 2540 aa2.01□□□□□ -2.09
RGPD1-202ENST00000409776 CRCT1Q9UGL9 99 aa2.01□□□□□ -2.09
RGPD1-202ENST00000409776 CFAP46Q8IYW2 2715 aa2□□□□□ -2.09
RGPD1-202ENST00000409776 DSPP15924 2871 aaKnown RBP1.99□□□□□ -2.09
RGPD1-202ENST00000409776 KMT2BQ9UMN6 2715 aaPredicted RBP1.99□□□□□ -2.09
RGPD1-202ENST00000409776 TLN1Q9Y490 2541 aaKnown RBP1.99□□□□□ -2.09
RGPD1-202ENST00000409776 CRYBG3Q68DQ2 2970 aa1.99□□□□□ -2.09
RGPD1-202ENST00000409776 KRTAP10-1P60331 282 aa1.98□□□□□ -2.09
RGPD1-202ENST00000409776 POLQO75417 2590 aa1.98□□□□□ -2.09
RGPD1-202ENST00000409776 MYO18BQ8IUG5 2567 aa1.98□□□□□ -2.09
RGPD1-202ENST00000409776 OTOGQ6ZRI0 2925 aa1.97□□□□□ -2.09
RGPD1-202ENST00000409776 NOTCH2Q04721 2471 aa1.97□□□□□ -2.09
RGPD1-202ENST00000409776 MT3P25713 68 aa1.97□□□□□ -2.09
RGPD1-202ENST00000409776 FAT2Q9NYQ8 4349 aa1.97□□□□□ -2.09
RGPD1-202ENST00000409776 KRTAP10-5P60370 271 aa1.96□□□□□ -2.1
RGPD1-202ENST00000409776 KRTAP21-3Q3LHN1 58 aa1.95□□□□□ -2.1
RGPD1-202ENST00000409776 KRTAP10-2P60368 255 aa1.93□□□□□ -2.1
RGPD1-202ENST00000409776 KRTAP19-1Q8IUB9 90 aa1.93□□□□□ -2.1
RGPD1-202ENST00000409776 KRTAP3-1Q9BYR8 98 aa1.93□□□□□ -2.1
RGPD1-202ENST00000409776 BAHCC1Q9P281 2608 aa1.93□□□□□ -2.1
RGPD1-202ENST00000409776 KRTAP10-3P60369 221 aa1.93□□□□□ -2.1
RGPD1-202ENST00000409776 IGF2RP11717 2491 aa1.92□□□□□ -2.1
RGPD1-202ENST00000409776 CELSR2Q9HCU4 2923 aa1.92□□□□□ -2.1
RGPD1-202ENST00000409776 CHD8Q9HCK8 2581 aa1.92□□□□□ -2.1
RGPD1-202ENST00000409776 TENM4Q6N022 2769 aa1.92□□□□□ -2.1
RGPD1-202ENST00000409776 DCHS2Q6V1P9 2916 aa1.92□□□□□ -2.1
RGPD1-202ENST00000409776 CHD6Q8TD26 2715 aa1.92□□□□□ -2.1
RGPD1-202ENST00000409776 KRTAP13-1Q8IUC0 172 aa1.92□□□□□ -2.1
RGPD1-202ENST00000409776 COL7A1Q02388 2944 aa1.92□□□□□ -2.1
RGPD1-202ENST00000409776 KRTAP7-1Q8IUC3 87 aa1.92□□□□□ -2.1
RGPD1-202ENST00000409776 KRTAP4-12Q9BQ66 201 aa1.91□□□□□ -2.1
RGPD1-202ENST00000409776 PKD1P98161 4303 aa1.9□□□□□ -2.11
RGPD1-202ENST00000409776 CEP295Q9C0D2 2601 aa1.9□□□□□ -2.11
RGPD1-202ENST00000409776 DNAH8Q96JB1 4490 aa1.9□□□□□ -2.11
RGPD1-202ENST00000409776 LCE4AQ5TA78 99 aa1.9□□□□□ -2.11
RGPD1-202ENST00000409776 KRTAP1-5Q9BYS1 174 aa1.89□□□□□ -2.11
RGPD1-202ENST00000409776 DNHD1Q96M86 4753 aa1.89□□□□□ -2.11
RGPD1-202ENST00000409776 KRTAP10-4P60372 401 aaPredicted RBP1.89□□□□□ -2.11
RGPD1-202ENST00000409776 KRTAP9-6A0A140TA67 174 aa1.89□□□□□ -2.11
RGPD1-202ENST00000409776 KRTAP9-7A8MTY7 169 aa1.89□□□□□ -2.11
RGPD1-202ENST00000409776 ANKRD11Q6UB99 2663 aaPredicted RBP1.88□□□□□ -2.11
RGPD1-202ENST00000409776 FBN1P35555 2871 aaKnown RBP1.88□□□□□ -2.11
RGPD1-202ENST00000409776 FLNCQ14315 2725 aa1.87□□□□□ -2.11
RGPD1-202ENST00000409776 ASH1LQ9NR48 2969 aaKnown RBP1.87□□□□□ -2.11
RGPD1-202ENST00000409776 KRTAP13-3Q3SY46 172 aa1.86□□□□□ -2.11
RGPD1-202ENST00000409776 AKAP13Q12802 2813 aa1.86□□□□□ -2.11
RGPD1-202ENST00000409776 TACC2O95359 2948 aa1.86□□□□□ -2.11
RGPD1-202ENST00000409776 USP9XQ93008 2570 aaPredicted RBP1.86□□□□□ -2.11
RGPD1-202ENST00000409776 LRBAP50851 2863 aa1.86□□□□□ -2.11
RGPD1-202ENST00000409776 USP9YO00507 2555 aaPredicted RBP1.86□□□□□ -2.11
RGPD1-202ENST00000409776 SETXQ7Z333 2677 aaKnown RBP1.86□□□□□ -2.11
RGPD1-202ENST00000409776 HELZ2Q9BYK8 2649 aaKnown RBP1.85□□□□□ -2.11
RGPD1-202ENST00000409776 HECTD1Q9ULT8 2610 aa1.85□□□□□ -2.11
RGPD1-202ENST00000409776 SPTBN4Q9H254 2564 aa1.85□□□□□ -2.11
RGPD1-202ENST00000409776 KRTAP4-8Q9BYQ9 185 aa1.85□□□□□ -2.11
RGPD1-202ENST00000409776 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.85□□□□□ -2.11
RGPD1-202ENST00000409776 STAB2Q8WWQ8 2551 aa1.84□□□□□ -2.12
RGPD1-202ENST00000409776 DNAH17Q9UFH2 4485 aa1.84□□□□□ -2.12
RGPD1-202ENST00000409776 NF1P21359 2839 aa1.83□□□□□ -2.12
RGPD1-202ENST00000409776 FASNP49327 2511 aaKnown RBP1.83□□□□□ -2.12
RGPD1-202ENST00000409776 UBR5O95071 2799 aaPredicted RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms