RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 AEBP2Q6ZN18 517 aaPredicted RBP7.36□□□□□ -1.23
RGPD1-202ENST00000409776 MYT1Q01538 1121 aa7.25□□□□□ -1.25
RGPD1-202ENST00000409776 CHIC1Q5VXU3 224 aa7.17□□□□□ -1.26
RGPD1-202ENST00000409776 PELP1Q8IZL8 1130 aaKnown RBP7.04□□□□□ -1.28
RGPD1-202ENST00000409776 TTBK1Q5TCY1 1321 aaPredicted RBP6.86□□□□□ -1.31
RGPD1-202ENST00000409776 ERICH6Q7L0X2 663 aa6.8□□□□□ -1.32
RGPD1-202ENST00000409776 RANGAP1P46060 587 aaPredicted RBP6.66□□□□□ -1.34
RGPD1-202ENST00000409776 YTHDC1Q96MU7 727 aaKnown RBP6.63□□□□□ -1.35
RGPD1-202ENST00000409776 CCER1Q8TC90 406 aaPredicted RBP6.63□□□□□ -1.35
RGPD1-202ENST00000409776 PHF23Q9BUL5 403 aaPredicted RBP6.6□□□□□ -1.35
RGPD1-202ENST00000409776 DCAF8L2P0C7V8 631 aa6.52□□□□□ -1.36
RGPD1-202ENST00000409776 MYT1LQ9UL68 1186 aa6.51□□□□□ -1.37
RGPD1-202ENST00000409776 EHMT2Q96KQ7 1210 aa6.42□□□□□ -1.38
RGPD1-202ENST00000409776 POLR3GLQ9BT43 218 aa6.35□□□□□ -1.39
RGPD1-202ENST00000409776 GLIPR1L2Q4G1C9 344 aa6.3□□□□□ -1.4
RGPD1-202ENST00000409776 DAXXQ9UER7 740 aaPredicted RBP6.23□□□□□ -1.41
RGPD1-202ENST00000409776 RTL5Q5HYW3 569 aaPredicted RBP6.22□□□□□ -1.41
RGPD1-202ENST00000409776 CENPBP07199 599 aaPredicted RBP6.21□□□□□ -1.42
RGPD1-202ENST00000409776 SLC24A1O60721 1099 aa6.18□□□□□ -1.42
RGPD1-202ENST00000409776 EIF5BO60841 1220 aaKnown RBP6.16□□□□□ -1.42
RGPD1-202ENST00000409776 NEFLP07196 543 aa6.12□□□□□ -1.43
RGPD1-202ENST00000409776 FAM9AQ8IZU1 332 aaPredicted RBP6.12□□□□□ -1.43
RGPD1-202ENST00000409776 ATP1B4Q9UN42 357 aaPredicted RBP6.09□□□□□ -1.43
RGPD1-202ENST00000409776 CLSPNQ9HAW4 1339 aa6.07□□□□□ -1.44
RGPD1-202ENST00000409776 ZNF316A6NFI3 1004 aaPredicted RBP6.02□□□□□ -1.45
RGPD1-202ENST00000409776 ZNF326Q5BKZ1 582 aaKnown RBP6.01□□□□□ -1.45
RGPD1-202ENST00000409776 TNNT2P45379 298 aaPredicted RBP5.99□□□□□ -1.45
RGPD1-202ENST00000409776 CDK11BP21127 795 aaKnown RBP5.98□□□□□ -1.45
RGPD1-202ENST00000409776 CALRP27797 417 aaKnown RBP5.98□□□□□ -1.45
RGPD1-202ENST00000409776 TRIM44Q96DX7 344 aaPredicted RBP5.91□□□□□ -1.46
RGPD1-202ENST00000409776 NCLP19338 710 aaKnown RBP5.89□□□□□ -1.47
RGPD1-202ENST00000409776 AMER1Q5JTC6 1135 aaPredicted RBP5.89□□□□□ -1.47
RGPD1-202ENST00000409776 HAP1P54257 671 aaPredicted RBP5.85□□□□□ -1.47
RGPD1-202ENST00000409776 ANP32BQ92688 251 aaKnown RBP5.81□□□□□ -1.48
RGPD1-202ENST00000409776 ZEB1P37275 1124 aaPredicted RBP5.8□□□□□ -1.48
RGPD1-202ENST00000409776 CDK11AQ9UQ88 783 aaPredicted RBP5.79□□□□□ -1.48
RGPD1-202ENST00000409776 ARID3AQ99856 593 aa5.79□□□□□ -1.48
RGPD1-202ENST00000409776 PTMSP20962 102 aa5.78□□□□□ -1.48
RGPD1-202ENST00000409776 A0A0U1RQG5 324 aaPredicted RBP5.75□□□□□ -1.49
RGPD1-202ENST00000409776 MEX3CQ5U5Q3 659 aaKnown RBP5.75□□□□□ -1.49
RGPD1-202ENST00000409776 ARID4BQ4LE39 1312 aaPredicted RBP5.73□□□□□ -1.49
RGPD1-202ENST00000409776 ANP32EQ9BTT0 268 aa5.73□□□□□ -1.49
RGPD1-202ENST00000409776 APPP05067 770 aa5.73□□□□□ -1.49
RGPD1-202ENST00000409776 C14orf37Q86TY3 774 aa5.73□□□□□ -1.49
RGPD1-202ENST00000409776 SENP3Q9H4L4 574 aaPredicted RBP5.73□□□□□ -1.49
RGPD1-202ENST00000409776 STK11IPQ8N1F8 1099 aa5.72□□□□□ -1.49
RGPD1-202ENST00000409776 LAS1LQ9Y4W2 734 aaKnown RBP5.71□□□□□ -1.49
RGPD1-202ENST00000409776 PLPPR3Q6T4P5 718 aa5.71□□□□□ -1.5
RGPD1-202ENST00000409776 PPP6R1Q9UPN7 881 aa5.71□□□□□ -1.5
RGPD1-202ENST00000409776 LMOD2Q6P5Q4 547 aa5.69□□□□□ -1.5
RGPD1-202ENST00000409776 ANP32AP39687 249 aaKnown RBP5.68□□□□□ -1.5
RGPD1-202ENST00000409776 ZNF526Q8TF50 670 aaPredicted RBP5.68□□□□□ -1.5
RGPD1-202ENST00000409776 TNNT3P45378 269 aaPredicted RBP5.68□□□□□ -1.5
RGPD1-202ENST00000409776 PODXL2Q9NZ53 605 aa5.66□□□□□ -1.5
RGPD1-202ENST00000409776 ADRA2BP18089 450 aa5.63□□□□□ -1.51
RGPD1-202ENST00000409776 APLP2Q06481 763 aa5.63□□□□□ -1.51
RGPD1-202ENST00000409776 NEFHP12036 1026 aa5.62□□□□□ -1.51
RGPD1-202ENST00000409776 GOLGA6L22H0YM25 854 aa5.61□□□□□ -1.51
RGPD1-202ENST00000409776 HOMEZQ8IX15 550 aa5.6□□□□□ -1.51
RGPD1-202ENST00000409776 PCGF6Q9BYE7 350 aa5.6□□□□□ -1.51
RGPD1-202ENST00000409776 ZBTB47Q9UFB7 747 aaPredicted RBP5.6□□□□□ -1.51
RGPD1-202ENST00000409776 NEFMP07197 916 aa5.59□□□□□ -1.51
RGPD1-202ENST00000409776 TRIM26Q12899 539 aaPredicted RBP5.59□□□□□ -1.51
RGPD1-202ENST00000409776 HMGB1P09429 215 aaKnown RBP5.59□□□□□ -1.51
RGPD1-202ENST00000409776 NAP1L5Q96NT1 182 aaPredicted RBP5.58□□□□□ -1.52
RGPD1-202ENST00000409776 TULP1O00294 542 aaPredicted RBP5.57□□□□□ -1.52
RGPD1-202ENST00000409776 FOXD1Q16676 465 aa5.57□□□□□ -1.52
RGPD1-202ENST00000409776 NPM2Q86SE8 214 aaKnown RBP5.57□□□□□ -1.52
RGPD1-202ENST00000409776 CNGB1Q14028 1251 aaPredicted RBP5.57□□□□□ -1.52
RGPD1-202ENST00000409776 NBR1Q14596 966 aa5.56□□□□□ -1.52
RGPD1-202ENST00000409776 WDR43Q15061 677 aaKnown RBP eCLIP5.56□□□□□ -1.52
RGPD1-202ENST00000409776 ANP32CO43423 234 aa5.56□□□□□ -1.52
RGPD1-202ENST00000409776 TPRNQ4KMQ1 711 aa5.55□□□□□ -1.52
RGPD1-202ENST00000409776 GOLGA6L1Q8N7Z2 621 aa5.55□□□□□ -1.52
RGPD1-202ENST00000409776 PNNQ9H307 717 aaKnown RBP5.54□□□□□ -1.52
RGPD1-202ENST00000409776 PPP1R1BQ9UD71 204 aaPredicted RBP5.54□□□□□ -1.52
RGPD1-202ENST00000409776 ARXQ96QS3 562 aa5.53□□□□□ -1.52
RGPD1-202ENST00000409776 NEUROD1Q13562 356 aa5.52□□□□□ -1.53
RGPD1-202ENST00000409776 USP35Q9P2H5 1018 aa5.52□□□□□ -1.53
RGPD1-202ENST00000409776 SETQ01105 290 aaPredicted RBP5.52□□□□□ -1.53
RGPD1-202ENST00000409776 PATL2C9JE40 543 aaKnown RBP5.52□□□□□ -1.53
RGPD1-202ENST00000409776 DNTTIP2Q5QJE6 756 aaKnown RBP5.52□□□□□ -1.53
RGPD1-202ENST00000409776 SUPT5HO00267 1087 aaKnown RBP5.52□□□□□ -1.53
RGPD1-202ENST00000409776 ERICH6BQ5W0A0 696 aa5.51□□□□□ -1.53
RGPD1-202ENST00000409776 BCL11AQ9H165 835 aa5.5□□□□□ -1.53
RGPD1-202ENST00000409776 HSP90AA1P07900 732 aaKnown RBP5.5□□□□□ -1.53
RGPD1-202ENST00000409776 CHAF1AQ13111 956 aaPredicted RBP5.49□□□□□ -1.53
RGPD1-202ENST00000409776 TRIM41Q8WV44 630 aa5.49□□□□□ -1.53
RGPD1-202ENST00000409776 GOLGA6L6A8MZA4 724 aa5.48□□□□□ -1.53
RGPD1-202ENST00000409776 BCANQ96GW7 911 aa5.48□□□□□ -1.53
RGPD1-202ENST00000409776 PRKCSHP14314 528 aaPredicted RBP5.48□□□□□ -1.53
RGPD1-202ENST00000409776 TMX4Q9H1E5 349 aaPredicted RBP5.47□□□□□ -1.53
RGPD1-202ENST00000409776 RTN4Q9NQC3 1192 aaKnown RBP5.47□□□□□ -1.53
RGPD1-202ENST00000409776 PPM1GO15355 546 aaPredicted RBP5.47□□□□□ -1.53
RGPD1-202ENST00000409776 CLGNO14967 610 aa5.46□□□□□ -1.53
RGPD1-202ENST00000409776 TAF7LQ5H9L4 462 aa5.46□□□□□ -1.53
RGPD1-202ENST00000409776 CFAP44Q96MT7 982 aa5.46□□□□□ -1.53
RGPD1-202ENST00000409776 GOLGA6L3A6NEY3 463 aa5.46□□□□□ -1.54
RGPD1-202ENST00000409776 GOLGA6L4A6NEF3 574 aa5.45□□□□□ -1.54
RGPD1-202ENST00000409776 PTMAP06454 111 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms