RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 AEBP2Q6ZN18 517 aaPredicted RBP7.36□□□□□ -1.23
RGPD1-202ENST00000409776 MYT1Q01538 1121 aa7.25□□□□□ -1.25
RGPD1-202ENST00000409776 CHIC1Q5VXU3 224 aa7.17□□□□□ -1.26
RGPD1-202ENST00000409776 PELP1Q8IZL8 1130 aaKnown RBP7.04□□□□□ -1.28
RGPD1-202ENST00000409776 TTBK1Q5TCY1 1321 aaPredicted RBP6.86□□□□□ -1.31
RGPD1-202ENST00000409776 ERICH6Q7L0X2 663 aa6.8□□□□□ -1.32
RGPD1-202ENST00000409776 RANGAP1P46060 587 aaPredicted RBP6.66□□□□□ -1.34
RGPD1-202ENST00000409776 YTHDC1Q96MU7 727 aaKnown RBP6.63□□□□□ -1.35
RGPD1-202ENST00000409776 CCER1Q8TC90 406 aaPredicted RBP6.63□□□□□ -1.35
RGPD1-202ENST00000409776 PHF23Q9BUL5 403 aaPredicted RBP6.6□□□□□ -1.35
RGPD1-202ENST00000409776 DCAF8L2P0C7V8 631 aa6.52□□□□□ -1.36
RGPD1-202ENST00000409776 MYT1LQ9UL68 1186 aa6.51□□□□□ -1.37
RGPD1-202ENST00000409776 EHMT2Q96KQ7 1210 aa6.42□□□□□ -1.38
RGPD1-202ENST00000409776 POLR3GLQ9BT43 218 aa6.35□□□□□ -1.39
RGPD1-202ENST00000409776 GLIPR1L2Q4G1C9 344 aa6.3□□□□□ -1.4
RGPD1-202ENST00000409776 DAXXQ9UER7 740 aaPredicted RBP6.23□□□□□ -1.41
RGPD1-202ENST00000409776 RTL5Q5HYW3 569 aaPredicted RBP6.22□□□□□ -1.41
RGPD1-202ENST00000409776 CENPBP07199 599 aaPredicted RBP6.21□□□□□ -1.42
RGPD1-202ENST00000409776 SLC24A1O60721 1099 aa6.18□□□□□ -1.42
RGPD1-202ENST00000409776 EIF5BO60841 1220 aaKnown RBP6.16□□□□□ -1.42
RGPD1-202ENST00000409776 NEFLP07196 543 aa6.12□□□□□ -1.43
RGPD1-202ENST00000409776 FAM9AQ8IZU1 332 aaPredicted RBP6.12□□□□□ -1.43
RGPD1-202ENST00000409776 ATP1B4Q9UN42 357 aaPredicted RBP6.09□□□□□ -1.43
RGPD1-202ENST00000409776 CLSPNQ9HAW4 1339 aa6.07□□□□□ -1.44
RGPD1-202ENST00000409776 ZNF316A6NFI3 1004 aaPredicted RBP6.02□□□□□ -1.45
RGPD1-202ENST00000409776 ZNF326Q5BKZ1 582 aaKnown RBP6.01□□□□□ -1.45
RGPD1-202ENST00000409776 TNNT2P45379 298 aaPredicted RBP5.99□□□□□ -1.45
RGPD1-202ENST00000409776 CDK11BP21127 795 aaKnown RBP5.98□□□□□ -1.45
RGPD1-202ENST00000409776 CALRP27797 417 aaKnown RBP5.98□□□□□ -1.45
RGPD1-202ENST00000409776 TRIM44Q96DX7 344 aaPredicted RBP5.91□□□□□ -1.46
RGPD1-202ENST00000409776 NCLP19338 710 aaKnown RBP5.89□□□□□ -1.47
RGPD1-202ENST00000409776 AMER1Q5JTC6 1135 aaPredicted RBP5.89□□□□□ -1.47
RGPD1-202ENST00000409776 HAP1P54257 671 aaPredicted RBP5.85□□□□□ -1.47
RGPD1-202ENST00000409776 ANP32BQ92688 251 aaKnown RBP5.81□□□□□ -1.48
RGPD1-202ENST00000409776 ZEB1P37275 1124 aaPredicted RBP5.8□□□□□ -1.48
RGPD1-202ENST00000409776 CDK11AQ9UQ88 783 aaPredicted RBP5.79□□□□□ -1.48
RGPD1-202ENST00000409776 ARID3AQ99856 593 aa5.79□□□□□ -1.48
RGPD1-202ENST00000409776 PTMSP20962 102 aa5.78□□□□□ -1.48
RGPD1-202ENST00000409776 A0A0U1RQG5 324 aaPredicted RBP5.75□□□□□ -1.49
RGPD1-202ENST00000409776 MEX3CQ5U5Q3 659 aaKnown RBP5.75□□□□□ -1.49
RGPD1-202ENST00000409776 ARID4BQ4LE39 1312 aaPredicted RBP5.73□□□□□ -1.49
RGPD1-202ENST00000409776 ANP32EQ9BTT0 268 aa5.73□□□□□ -1.49
RGPD1-202ENST00000409776 APPP05067 770 aa5.73□□□□□ -1.49
RGPD1-202ENST00000409776 C14orf37Q86TY3 774 aa5.73□□□□□ -1.49
RGPD1-202ENST00000409776 SENP3Q9H4L4 574 aaPredicted RBP5.73□□□□□ -1.49
RGPD1-202ENST00000409776 STK11IPQ8N1F8 1099 aa5.72□□□□□ -1.49
RGPD1-202ENST00000409776 LAS1LQ9Y4W2 734 aaKnown RBP5.71□□□□□ -1.49
RGPD1-202ENST00000409776 PLPPR3Q6T4P5 718 aa5.71□□□□□ -1.5
RGPD1-202ENST00000409776 PPP6R1Q9UPN7 881 aa5.71□□□□□ -1.5
RGPD1-202ENST00000409776 LMOD2Q6P5Q4 547 aa5.69□□□□□ -1.5
RGPD1-202ENST00000409776 ANP32AP39687 249 aaKnown RBP5.68□□□□□ -1.5
RGPD1-202ENST00000409776 ZNF526Q8TF50 670 aaPredicted RBP5.68□□□□□ -1.5
RGPD1-202ENST00000409776 TNNT3P45378 269 aaPredicted RBP5.68□□□□□ -1.5
RGPD1-202ENST00000409776 PODXL2Q9NZ53 605 aa5.66□□□□□ -1.5
RGPD1-202ENST00000409776 ADRA2BP18089 450 aa5.63□□□□□ -1.51
RGPD1-202ENST00000409776 APLP2Q06481 763 aa5.63□□□□□ -1.51
RGPD1-202ENST00000409776 NEFHP12036 1026 aa5.62□□□□□ -1.51
RGPD1-202ENST00000409776 GOLGA6L22H0YM25 854 aa5.61□□□□□ -1.51
RGPD1-202ENST00000409776 HOMEZQ8IX15 550 aa5.6□□□□□ -1.51
RGPD1-202ENST00000409776 PCGF6Q9BYE7 350 aa5.6□□□□□ -1.51
RGPD1-202ENST00000409776 ZBTB47Q9UFB7 747 aaPredicted RBP5.6□□□□□ -1.51
RGPD1-202ENST00000409776 NEFMP07197 916 aa5.59□□□□□ -1.51
RGPD1-202ENST00000409776 TRIM26Q12899 539 aaPredicted RBP5.59□□□□□ -1.51
RGPD1-202ENST00000409776 HMGB1P09429 215 aaKnown RBP5.59□□□□□ -1.51
RGPD1-202ENST00000409776 NAP1L5Q96NT1 182 aaPredicted RBP5.58□□□□□ -1.52
RGPD1-202ENST00000409776 TULP1O00294 542 aaPredicted RBP5.57□□□□□ -1.52
RGPD1-202ENST00000409776 FOXD1Q16676 465 aa5.57□□□□□ -1.52
RGPD1-202ENST00000409776 NPM2Q86SE8 214 aaKnown RBP5.57□□□□□ -1.52
RGPD1-202ENST00000409776 CNGB1Q14028 1251 aaPredicted RBP5.57□□□□□ -1.52
RGPD1-202ENST00000409776 NBR1Q14596 966 aa5.56□□□□□ -1.52
RGPD1-202ENST00000409776 WDR43Q15061 677 aaKnown RBP eCLIP5.56□□□□□ -1.52
RGPD1-202ENST00000409776 ANP32CO43423 234 aa5.56□□□□□ -1.52
RGPD1-202ENST00000409776 TPRNQ4KMQ1 711 aa5.55□□□□□ -1.52
RGPD1-202ENST00000409776 GOLGA6L1Q8N7Z2 621 aa5.55□□□□□ -1.52
RGPD1-202ENST00000409776 PNNQ9H307 717 aaKnown RBP5.54□□□□□ -1.52
RGPD1-202ENST00000409776 PPP1R1BQ9UD71 204 aaPredicted RBP5.54□□□□□ -1.52
RGPD1-202ENST00000409776 ARXQ96QS3 562 aa5.53□□□□□ -1.52
RGPD1-202ENST00000409776 NEUROD1Q13562 356 aa5.52□□□□□ -1.53
RGPD1-202ENST00000409776 USP35Q9P2H5 1018 aa5.52□□□□□ -1.53
RGPD1-202ENST00000409776 SETQ01105 290 aaPredicted RBP5.52□□□□□ -1.53
RGPD1-202ENST00000409776 PATL2C9JE40 543 aaKnown RBP5.52□□□□□ -1.53
RGPD1-202ENST00000409776 DNTTIP2Q5QJE6 756 aaKnown RBP5.52□□□□□ -1.53
RGPD1-202ENST00000409776 SUPT5HO00267 1087 aaKnown RBP5.52□□□□□ -1.53
RGPD1-202ENST00000409776 ERICH6BQ5W0A0 696 aa5.51□□□□□ -1.53
RGPD1-202ENST00000409776 BCL11AQ9H165 835 aa5.5□□□□□ -1.53
RGPD1-202ENST00000409776 HSP90AA1P07900 732 aaKnown RBP5.5□□□□□ -1.53
RGPD1-202ENST00000409776 CHAF1AQ13111 956 aaPredicted RBP5.49□□□□□ -1.53
RGPD1-202ENST00000409776 TRIM41Q8WV44 630 aa5.49□□□□□ -1.53
RGPD1-202ENST00000409776 GOLGA6L6A8MZA4 724 aa5.48□□□□□ -1.53
RGPD1-202ENST00000409776 BCANQ96GW7 911 aa5.48□□□□□ -1.53
RGPD1-202ENST00000409776 PRKCSHP14314 528 aaPredicted RBP5.48□□□□□ -1.53
RGPD1-202ENST00000409776 TMX4Q9H1E5 349 aaPredicted RBP5.47□□□□□ -1.53
RGPD1-202ENST00000409776 RTN4Q9NQC3 1192 aaKnown RBP5.47□□□□□ -1.53
RGPD1-202ENST00000409776 PPM1GO15355 546 aaPredicted RBP5.47□□□□□ -1.53
RGPD1-202ENST00000409776 CLGNO14967 610 aa5.46□□□□□ -1.53
RGPD1-202ENST00000409776 TAF7LQ5H9L4 462 aa5.46□□□□□ -1.53
RGPD1-202ENST00000409776 CFAP44Q96MT7 982 aa5.46□□□□□ -1.53
RGPD1-202ENST00000409776 GOLGA6L3A6NEY3 463 aa5.46□□□□□ -1.54
RGPD1-202ENST00000409776 GOLGA6L4A6NEF3 574 aa5.45□□□□□ -1.54
RGPD1-202ENST00000409776 PTMAP06454 111 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms